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8S2W
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BU of 8s2w by Molmil
SSX structure of Arabidopsis thaliana Pdx1.3 grown in seeded batch conditions
Descriptor: PHOSPHATE ION, Pyridoxal 5'-phosphate synthase subunit PDX1.3
Authors:Stubbs, J, Tews, I, Maly, M.
Deposit date:2024-02-19
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Droplet microfluidics for time-resolved serial crystallography.
Iucrj, 11, 2024
8S2U
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BU of 8s2u by Molmil
SSX structure of Lysozyme grown in batch conditions
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Stubbs, J, Tews, I, Maly, M.
Deposit date:2024-02-19
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Droplet microfluidics for time-resolved serial crystallography.
Iucrj, 11, 2024
8S2V
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BU of 8s2v by Molmil
SSX structure of Lysozyme grown in microfluidic droplets
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Stubbs, J, Tews, I, Maly, M.
Deposit date:2024-02-19
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Droplet microfluidics for time-resolved serial crystallography.
Iucrj, 11, 2024
8S2X
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BU of 8s2x by Molmil
SSX structure of Arabidopsis thaliana Pdx1.3 grown in microfluidic droplets
Descriptor: CITRIC ACID, PHOSPHATE ION, Pyridoxal 5'-phosphate synthase subunit PDX1.3
Authors:Stubbs, J, Tews, I, Maly, M.
Deposit date:2024-02-19
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Droplet microfluidics for time-resolved serial crystallography.
Iucrj, 11, 2024
1B6S
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BU of 1b6s by Molmil
STRUCTURE OF N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PROTEIN (N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE)
Authors:Thoden, J.B, Kappock, T.J, Stubbe, J, Holden, H.M.
Deposit date:1999-01-18
Release date:1999-11-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of N5-carboxyaminoimidazole ribonucleotide synthetase: a member of the ATP grasp protein superfamily.
Biochemistry, 38, 1999
1B6R
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BU of 1b6r by Molmil
N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE FROM E. COLI
Descriptor: PROTEIN (N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE), SULFATE ION
Authors:Thoden, J.B, Kappock, T.J, Stubbe, J, Holden, H.M.
Deposit date:1999-01-17
Release date:1999-11-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three-dimensional structure of N5-carboxyaminoimidazole ribonucleotide synthetase: a member of the ATP grasp protein superfamily.
Biochemistry, 38, 1999
2ATE
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BU of 2ate by Molmil
Structure of the complex of PurE with NitroAIR
Descriptor: ((2R,3S,4R,5R)-5-(5-AMINO-4-NITRO-1H-IMIDAZOL-1-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL)METHYL DIHYDROGEN PHOSPHATE, Phosphoribosylaminoimidazole carboxylase catalytic subunit
Authors:Kappock, T.J, Mathews, I.I, Zaugg, J.B, Peng, P, Hoskins, A.A, Okamoto, A, Ealick, S.E, Stubbe, J.
Deposit date:2005-08-24
Release date:2006-08-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:N5-CAIR mutase: role of a CO2 binding site and substrate movement in catalysis.
Biochemistry, 46, 2007
1D7A
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BU of 1d7a by Molmil
CRYSTAL STRUCTURE OF E. COLI PURE-MONONUCLEOTIDE COMPLEX.
Descriptor: 5-AMINOIMIDAZOLE RIBONUCLEOTIDE, PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE
Authors:Mathews, I.I, Kappock, T.J, Stubbe, J, Ealick, S.E.
Deposit date:1999-10-16
Release date:1999-12-03
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Escherichia coli PurE, an unusual mutase in the purine biosynthetic pathway.
Structure Fold.Des., 7, 1999
2O80
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BU of 2o80 by Molmil
Duplex DNA containing an abasic site with an opposite dC (alpha anomer) in 5'-G_AC-3' (10 structure ensemble and averaged structure)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(ORP)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*CP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-12-11
Release date:2007-11-27
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics.
Nucleic Acids Res., 36, 2008
2O7W
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BU of 2o7w by Molmil
Duplex DNA containing an abasic site with an opposite G (alpha anomer) in 5'-G_AC-3' (10 structure ensemble and averaged structure)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(ORP)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*GP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-12-11
Release date:2007-11-27
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics.
Nucleic Acids Res., 36, 2008
2O7Z
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BU of 2o7z by Molmil
Duplex DNA containing an abasic site with an opposite T (beta anomer) in 5'-G_AC-3' (10 structure ensemble and averaged structure)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*TP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-12-11
Release date:2007-11-27
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics.
Nucleic Acids Res., 36, 2008
2O82
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BU of 2o82 by Molmil
Duplex DNA containing an abasic site with an opposite dC (beta anomer) in 5'-G_AC-3' (10 structure ensemble and averaged structure)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*CP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-12-11
Release date:2007-11-27
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics.
Nucleic Acids Res., 36, 2008
2O7X
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BU of 2o7x by Molmil
Duplex DNA containing an abasic site with an opposite G (beta anomer) in 5'-G_AC-3' (10 structure ensemble and averaged structure)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*GP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-12-11
Release date:2007-11-27
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics.
Nucleic Acids Res., 36, 2008
2O7Y
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BU of 2o7y by Molmil
Duplex DNA containing an abasic site with an opposite T (alpha anomer) in 5'-G_AC-3' (10 structure ensemble and averaged structure)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(ORP)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*TP*CP*TP*TP*TP*GP*G)-3'
Authors:Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-12-11
Release date:2007-11-27
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics.
Nucleic Acids Res., 36, 2008
6W4X
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BU of 6w4x by Molmil
Holocomplex of E. coli class Ia ribonucleotide reductase with GDP and TTP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MU-OXO-DIIRON, ...
Authors:Kang, G, Taguchi, A, Stubbe, J, Drennan, C.
Deposit date:2020-03-11
Release date:2020-04-08
Last modified:2020-05-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of a trapped radical transfer pathway within a ribonucleotide reductase holocomplex.
Science, 368, 2020
2HSL
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BU of 2hsl by Molmil
NMR structure of 13mer duplex DNA containing an abasic site, averaged structure (alpha anomer)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(D1P)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-07-22
Release date:2007-05-29
Last modified:2018-08-08
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites.
Biochemistry, 46, 2007
2HSS
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BU of 2hss by Molmil
13mer duplex DNA containg an abasic site with beta anomer, averaged structure
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-07-22
Release date:2007-05-29
Last modified:2018-08-08
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites.
Biochemistry, 46, 2007
2HOU
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BU of 2hou by Molmil
Structure ensembles of duplex DNA containing a 4'-oxidized abasic site.
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(X4A)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-07-16
Release date:2007-05-29
Last modified:2018-08-08
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites.
Biochemistry, 46, 2007
2HSK
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BU of 2hsk by Molmil
NMR Structure of 13mer Duplex DNA containing an abasic site (Y) in 5'-CCAAAGYACCGGG-3' (10 structures, alpha anomer)
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(D1P)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-07-21
Release date:2007-05-29
Last modified:2018-08-08
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites.
Biochemistry, 46, 2007
2HSR
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BU of 2hsr by Molmil
13mer duplex DNA containing an abasic site with beta anomer
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-07-22
Release date:2007-05-29
Last modified:2018-08-08
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites.
Biochemistry, 46, 2007
2HPX
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BU of 2hpx by Molmil
13mer Duplex DNA containing a 4'-oxidized abasic site, averaged structure
Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(X4A)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3'
Authors:Chen, J, Dupradeau, F.Y, Case, D.A, Turner, C.J, Stubbe, J.
Deposit date:2006-07-17
Release date:2007-05-29
Last modified:2018-08-08
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites.
Biochemistry, 46, 2007
1SMS
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BU of 1sms by Molmil
Structure of the Ribonucleotide Reductase Rnr4 Homodimer from Saccharomyces cerevisiae
Descriptor: MERCURY (II) ION, Ribonucleoside-diphosphate reductase small chain 2
Authors:Sommerhalter, M, Voegtli, W.C, Perlstein, D.L, Ge, J, Stubbe, J, Rosenzweig, A.C.
Deposit date:2004-03-09
Release date:2004-08-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of the yeast ribonucleotide reductase Rnr2 and Rnr4 homodimers.
Biochemistry, 43, 2004
4M1F
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BU of 4m1f by Molmil
X-ray crystal structure of E. coli apo NrdF
Descriptor: Ribonucleoside-diphosphate reductase 2 subunit beta
Authors:Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C.
Deposit date:2013-08-02
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystal structure of E. coli apo NrdF
To be Published
1GJ2
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BU of 1gj2 by Molmil
CO(III)-BLEOMYCIN-OOH BOUND TO AN OLIGONUCLEOTIDE CONTAINING A PHOSPHOGLYCOLATE LESION
Descriptor: 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3', ...
Authors:Hoehn, S.T, Junker, H.-D, Bunt, R.C, Turner, C.J, Stubbe, J.
Deposit date:2000-11-01
Release date:2001-06-06
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of Co(III)-bleomycin-OOH bound to a phosphoglycolate lesion containing oligonucleotide: implications for bleomycin-induced double-strand DNA cleavage.
Biochemistry, 40, 2001
1G5L
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BU of 1g5l by Molmil
CO(III)-BLEOMYCIN-OOH BOUND TO AN OLIGONUCLEOTIDE CONTAINING A PHOSPHOGLYCOLATE LESION
Descriptor: 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3', ...
Authors:Hoehn, S.T, Junker, H.-D, Bunt, R.C, Turner, C.J, Stubbe, J.
Deposit date:2000-11-01
Release date:2001-06-06
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of Co(III)-bleomycin-OOH bound to a phosphoglycolate lesion containing oligonucleotide: implications for bleomycin-induced double-strand DNA cleavage.
Biochemistry, 40, 2001

217705

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