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1C95
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BU of 1c95 by Molmil
Solution structure of the aminoacyl-capped oligodeoxyribonucleotide duplex TRP-D(TGCGCAC)2
Descriptor: 5'-D((5AT)TP*GP*CP*GP*CP*AP*C)-3', TRYPTOPHAN
Authors:Ho, W.C, Steinbeck, C, Richert, C.
Deposit date:1999-07-31
Release date:1999-10-08
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of the aminoacyl-capped oligodeoxyribonucleotide duplex (W-TGCGCAC)(2).
Biochemistry, 38, 1999
1KSE
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BU of 1kse by Molmil
Solution Structure of a quinolone-capped DNA duplex
Descriptor: 5'-D(*(5AT)P*GP*CP*GP*CP*A)-3', OXOLINIC ACID
Authors:Tuma, J, Connors, W.H, Stitelman, D.H, Richert, C.
Deposit date:2002-01-12
Release date:2002-05-08
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:On the effect of covalently appended quinolones on termini of DNA duplexes.
J.Am.Chem.Soc., 124, 2002
1X6W
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BU of 1x6w by Molmil
Solution Structure of the DNA Duplex TGCGCA:TGCGCA Capped by Trimethoxystilbene Residues
Descriptor: 5'-D(*(TMS)P*TP*GP*CP*GP*CP*A)-3'
Authors:Tuma, J, Paulini, R, Sttz, J, Richert, C.
Deposit date:2004-08-12
Release date:2004-10-05
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:How much pi-stacking do DNA termini seek? Solution structure of a self-complementary DNA hexamer with trimethoxystilbenes capping the terminal base pairs.
Biochemistry, 43, 2004
1ON5
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BU of 1on5 by Molmil
SOLUTION STRUCTURE OF A CHOLIC ACID-CAPPED DNA DUPLEX
Descriptor: CHOLIC ACID, Steroid-DNA hybrid
Authors:Tuma, J, Richert, C.
Deposit date:2003-02-27
Release date:2003-08-05
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution Structure of a Steroid-DNA Complex with Cholic Acid Residues Sealing the Termini of a Watson-Crick Duplex
Biochemistry, 42, 2003
2KK5
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BU of 2kk5 by Molmil
High Fidelity Base Pairing at the 3'-Terminus
Descriptor: 5'-D(*AP*CP*GP*CP*GP*(2AU))-3', 9,10-dioxo-9,10-dihydroanthracene-2-carboxamide
Authors:Patra, A, Richert, C.
Deposit date:2009-06-15
Release date:2009-07-21
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:High fidelity base pairing at the 3'-terminus.
J.Am.Chem.Soc., 131, 2009
2BQ2
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BU of 2bq2 by Molmil
Solution Structure of the DNA Duplex ACGCGU-NA with a 2' Amido-Linked Nalidixic Acid Residue at the 3' Terminal Nucleotide
Descriptor: 5'-D(*AP*CP*GP*CP*GP*2AU)-3', NALIDIXIC ACID
Authors:Siegmund, K, Maheshwary, S, Narayanan, S, Connors, W, Richert, M.
Deposit date:2005-04-26
Release date:2006-08-03
Last modified:2018-05-09
Method:SOLUTION NMR
Cite:Molecular details of quinolone-DNA interactions: solution structure of an unusually stable DNA duplex with covalently linked nalidixic acid residues and non-covalent complexes derived from it.
Nucleic Acids Res., 33, 2005
6XHC
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BU of 6xhc by Molmil
Structure of glycinyl 5'-O-adenosine phosphoramidate
Descriptor: 2-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]amino]ethanoic acid, Ribonuclease pancreatic
Authors:Pallan, P.S, Egli, M.
Deposit date:2020-06-18
Release date:2020-12-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Enzyme-Free Release of Nucleotides from Phosphoramidates Depends Strongly on the Amino Acid.
Angew.Chem.Int.Ed.Engl., 59, 2020
6XHE
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BU of 6xhe by Molmil
Structure of beta-prolinyl 5'-O-adenosine phosphoramidate
Descriptor: 5'-O-[(S)-[(3S)-3-carboxypyrrolidin-1-yl](hydroxy)phosphoryl]adenosine, ADENOSINE MONOPHOSPHATE, Ribonuclease pancreatic
Authors:Pallan, P.S, Egli, M.
Deposit date:2020-06-18
Release date:2021-03-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The Enzyme-Free Release of Nucleotides from Phosphoramidates Depends Strongly on the Amino Acid.
Angew.Chem.Int.Ed.Engl., 59, 2020
6XHD
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BU of 6xhd by Molmil
Structure of Prolinyl-5'-O-adenosine phosphoramidate
Descriptor: (2~{S})-1-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]pyrrolidine-2-carboxylic acid, (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, ...
Authors:Pallan, P.S, Egli, M.
Deposit date:2020-06-18
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:The Enzyme-Free Release of Nucleotides from Phosphoramidates Depends Strongly on the Amino Acid.
Angew.Chem.Int.Ed.Engl., 59, 2020
6XHF
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BU of 6xhf by Molmil
Structure of Phenylalanyl-5'-O-adenosine phosphoramidate
Descriptor: (2~{S})-2-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]amino]-3-phenyl-propanoic acid, CHLORIDE ION, Ribonuclease pancreatic
Authors:Pallan, P.S, Egli, M.
Deposit date:2020-06-18
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Enzyme-Free Release of Nucleotides from Phosphoramidates Depends Strongly on the Amino Acid.
Angew.Chem.Int.Ed.Engl., 59, 2020

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