Author results

1HCP
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DNA RECOGNITION BY THE OESTROGEN RECEPTOR: FROM SOLUTION TO THE CRYSTAL
Descriptor:HUMAN/CHICKEN ESTROGEN RECEPTOR, ZINC ION
Authors:Schwabe, J.W.R., Rhodes, D., Neuhaus, D.
Deposit date:1993-11-23
Release date:1995-11-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:DNA recognition by the oestrogen receptor: from solution to the crystal.
Structure, 1, 1993
1EVV
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CRYSTAL STRUCTURE OF YEAST PHENYLALANINE TRANSFER RNA AT 2.0 A RESOLUTION
Descriptor:PHENYLALANINE TRANSFER RNA, MAGNESIUM ION, SPERMINE
Authors:Jovine, L., Djordjevic, S., Rhodes, D.
Deposit date:2000-04-20
Release date:2000-05-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of yeast phenylalanine tRNA at 2.0 A resolution: cleavage by Mg(2+) in 15-year old crystals.
J.Mol.Biol., 301, 2000
1NCS
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NMR STUDY OF SWI5 ZINC FINGER DOMAIN 1
Descriptor:TRANSCRIPTIONAL FACTOR SWI5, ZINC ION
Authors:Dutnall, R.N., Neuhaus, D., Rhodes, D.
Deposit date:1996-02-26
Release date:1996-06-10
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The solution structure of the first zinc finger domain of SWI5: a novel structural extension to a common fold.
Structure, 4, 1996
1HCQ
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THE CRYSTAL STRUCTURE OF THE ESTROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO DNA: HOW RECEPTORS DISCRIMINATE BETWEEN THEIR RESPONSE ELEMENTS
Descriptor:DNA (5'-D(*CP*CP*AP*GP*GP*TP*CP*AP*CP*AP*GP*TP*GP*AP*CP*CP*T P*G)-3'), DNA (5'-D(*CP*CP*AP*GP*GP*TP*CP*AP*CP*TP*GP*TP*GP*AP*CP*CP*T P*G)-3'), PROTEIN (ESTROGEN RECEPTOR), ...
Authors:Schwabe, J.W.R., Chapman, L., Finch, J.T., Rhodes, D.
Deposit date:1995-01-04
Release date:1995-11-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of the estrogen receptor DNA-binding domain bound to DNA: how receptors discriminate between their response elements.
Cell(Cambridge,Mass.), 75, 1993
1IGN
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DNA-BINDING DOMAIN OF RAP1 IN COMPLEX WITH TELOMERIC DNA SITE
Descriptor:DNA (5'-D(*CP*CP*GP*CP*AP*CP*AP*CP*CP*CP*AP*CP*AP*CP*AP*CP*C P*AP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*GP*TP*GP*TP*GP*TP*GP*GP*GP*TP*GP*TP*G P*CP*G)-3'), PROTEIN (RAP1)
Authors:Koenig, P., Giraldo, R., Chapman, L., Rhodes, D.
Deposit date:1996-02-29
Release date:1997-01-27
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The crystal structure of the DNA-binding domain of yeast RAP1 in complex with telomeric DNA.
Cell(Cambridge,Mass.), 85, 1996
2DRP
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THE CRYSTAL STRUCTURE OF A TWO ZINC-FINGER PEPTIDE REVEALS AN EXTENSION TO THE RULES FOR ZINC-FINGER/DNA RECOGNITION
Descriptor:DNA (5'-D(*CP*TP*AP*AP*TP*AP*AP*GP*GP*AP*TP*AP*AP*CP*GP*TP*C P*CP*G)-3'), DNA (5'-D(*TP*CP*GP*GP*AP*CP*GP*TP*TP*AP*TP*CP*CP*TP*TP*AP*T P*TP*A)-3'), PROTEIN (TRAMTRACK DNA-BINDING DOMAIN), ...
Authors:Fairall, L., Schwabe, J.W.R., Chapman, L., Finch, J.T., Rhodes, D.
Deposit date:1994-06-06
Release date:1994-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of a two zinc-finger peptide reveals an extension to the rules for zinc-finger/DNA recognition.
Nature, 366, 1993
1H6O
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DIMERISATION DOMAIN FROM HUMAN TRF1
Descriptor:TELOMERIC REPEAT BINDING FACTOR 1
Authors:Fairall, L., Chapman, L., Rhodes, D.
Deposit date:2001-06-20
Release date:2001-09-05
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the TRFH dimerization domain of the human telomeric proteins TRF1 and TRF2.
Mol. Cell, 8, 2001
1H6P
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DIMERISTION DOMAIN FROM HUMAN TRF2
Descriptor:TELOMERIC REPEAT BINDING FACTOR 2, MAGNESIUM ION
Authors:Chapman, L., Fairall, L., Rhodes, D.
Deposit date:2001-06-20
Release date:2001-09-05
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the Trfh Dimerization Domain of the Human Telomere Proteins Trf1 and Trf2
Mol.Cell, 8, 2001
1HYV
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HIV INTEGRASE CORE DOMAIN COMPLEXED WITH TETRAPHENYL ARSONIUM
Descriptor:INTEGRASE, SULFATE ION, CHLORIDE ION, ...
Authors:Molteni, V., Greenwald, J., Rhodes, D., Hwang, Y., Kwiatkowski, W., Bushman, F.D., Siegel, J.S., Choe, S.
Deposit date:2001-01-22
Release date:2001-04-04
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification of a small-molecule binding site at the dimer interface of the HIV integrase catalytic domain.
Acta Crystallogr.,Sect.D, 57, 2001
1HYZ
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HIV INTEGRASE CORE DOMAIN COMPLEXED WITH A DERIVATIVE OF TETRAPHENYL ARSONIUM.
Descriptor:INTEGRASE, SULFATE ION, CHLORIDE ION, ...
Authors:Molteni, V., Greenwald, J., Rhodes, D., Hwang, Y., Kwiatkowski, W., Bushman, F.D., Siegel, J.S., Choe, S.
Deposit date:2001-01-22
Release date:2001-04-04
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification of a small-molecule binding site at the dimer interface of the HIV integrase catalytic domain.
Acta Crystallogr.,Sect.D, 57, 2001
1ITY
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SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF HUMAN TRF1
Descriptor:TRF1
Authors:Nishikawa, T., Okamura, H., Nagadoi, A., Konig, P., Rhodes, D., Nishimura, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-02-15
Release date:2002-03-06
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of a telomeric DNA complex of human TRF1
Structure, 9, 2001
1IV6
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SOLUTION STRUCTURE OF THE DNA COMPLEX OF HUMAN TRF1
Descriptor:5'-D(*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3', 5'-D(*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*C)-3', TELOMERIC REPEAT BINDING FACTOR 1
Authors:Nishikawa, T., Okamura, H., Nagadoi, A., Konig, P., Rhodes, D., Nishimura, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-03-14
Release date:2002-04-17
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of a telomeric DNA complex of human TRF1.
Structure, 9, 2001
1W0T
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HTRF1 DNA-BINDING DOMAIN IN COMPLEX WITH TELOMERIC DNA.
Descriptor:TELOMERIC REPEAT BINDING FACTOR 1, 5'-D(*CP*TP*GP*TP*TP*AP*GP*GP*GP*TP *TP*AP*GP*GP*GP*TP*TP*AP*G)-3', 5'-D(*TP*CP*TP*AP*AP*CP*CP*CP*TP*AP *AP*CP*CP*CP*TP*AP*AP*CP*A)-3'
Authors:Court, R.I., Chapman, L.M., Fairall, L., Rhodes, D.
Deposit date:2004-06-11
Release date:2004-12-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:How the Human Telomeric Proteins Trf1 and Trf2 Recognize Telomeric DNA: A View from High-Resolution Crystal Structures
Embo Rep., 6, 2005
1W0U
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HTRF2 DNA-BINDING DOMAIN IN COMPLEX WITH TELOMERIC DNA.
Descriptor:TELOMERIC REPEAT BINDING FACTOR 2, 5'-D(*TP*CP*TP*AP*GP*GP*GP*TP*TP*AP *GP*GP*GP*TP*TP*AP*G)-3', 5'-D(*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP *CP*CP*CP*TP*AP*GP*A)-3'
Authors:Court, R.I., Chapman, L.M., Fairall, L., Rhodes, D.
Deposit date:2004-06-11
Release date:2004-12-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:How the Human Telomeric Proteins Trf1 and Trf2 Recognize Telomeric DNA: A View from High-Resolution Crystal Structures
Embo Rep., 6, 2005
4AA6
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THE OESTROGEN RECEPTOR RECOGNIZES AN IMPERFECTLY PALINDROMIC RESPONSE ELEMENT THROUGH AN ALTERNATIVE SIDE-CHAIN CONFORMATION
Descriptor:ESTROGEN RECEPTOR, 5'-D(*CP*TP*AP*AP*GP*TP*CP*AP*CP*AP*GP*TP*GP*AP *CP*CP*TP*G)-3', 5'-D(*TP*CP*AP*GP*GP*TP*CP*AP*CP*TP*GP*TP*GP*AP *CP*TP*TP*A)-3', ...
Authors:Schwabe, J.W., Chapman, L., Rhodes, D.
Deposit date:2011-11-30
Release date:2011-12-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Oestrogen Receptor Recognizes an Imperfectly Palindromic Response Element Through an Alternative Side-Chain Conformation.
Structure, 3, 1995
4LD9
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CRYSTAL STRUCTURE OF THE N-TERMINALLY ACETYLATED BAH DOMAIN OF SIR3 BOUND TO THE NUCLEOSOME CORE PARTICLE
Descriptor:Histone H3.2, Histone H4, Histone H2A, ...
Authors:Arnaudo, N., Fernandez, I.S., McLaughlin, S.H., Peak-Chew, S.Y., Rhodes, D., Martino, F.
Deposit date:2013-06-24
Release date:2013-08-14
Last modified:2013-09-18
Method:X-RAY DIFFRACTION (3.306 Å)
Cite:The N-terminal acetylation of Sir3 stabilizes its binding to the nucleosome core particle.
Nat.Struct.Mol.Biol., 20, 2013
1ZFD
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SWI5 ZINC FINGER DOMAIN 2, NMR, 45 STRUCTURES
Descriptor:SWI5, ZINC ION
Authors:Neuhaus, D., Nakaseko, Y., Schwabe, J.W.R., Rhodes, D., Klug, A.
Deposit date:1996-04-04
Release date:1996-10-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structures of two zinc-finger domains from SWI5 obtained using two-dimensional 1H nuclear magnetic resonance spectroscopy. A zinc-finger structure with a third strand of beta-sheet.
J.Mol.Biol., 228, 1992
3NF6
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STRUCTURAL BASIS FOR A NEW MECHANISM OF INHIBITION OF HIV INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DESIGN
Descriptor:Integrase, SULFATE ION, 1,2-ETHANEDIOL, ...
Authors:Peat, T.S., Newman, J., Deadman, J.J., Rhodes, D.
Deposit date:2010-06-09
Release date:2011-04-27
Last modified:2012-05-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for a new mechanism of inhibition of HIV-1 integrase identified by fragment screening and structure-based design
ANTIVIR.CHEM.CHEMOTHER., 21, 2011
3NF7
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STRUCTURAL BASIS FOR A NEW MECHANISM OF INHIBITION OF HIV INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DESIGN
Descriptor:Integrase, SULFATE ION, ACETIC ACID, ...
Authors:Peat, T.S., Newman, J., Deadman, J.J., Rhodes, D.
Deposit date:2010-06-09
Release date:2011-04-27
Last modified:2012-05-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for a new mechanism of inhibition of HIV-1 integrase identified by fragment screening and structure-based design
ANTIVIR.CHEM.CHEMOTHER., 21, 2011
3NF8
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STRUCTURAL BASIS FOR A NEW MECHANISM OF INHIBITION OF HIV INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DESIGN
Descriptor:Integrase, SULFATE ION, 6-[(5-chloro-2-oxo-2,3-dihydro-1H-indol-1-yl)methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid, ...
Authors:Peat, T.S., Newman, J., Deadman, J.J., Rhodes, D.
Deposit date:2010-06-09
Release date:2011-04-27
Last modified:2012-05-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for a new mechanism of inhibition of HIV-1 integrase identified by fragment screening and structure-based design
ANTIVIR.CHEM.CHEMOTHER., 21, 2011
3NF9
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STRUCTURAL BASIS FOR A NEW MECHANISM OF INHIBITION OF HIV INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DESIGN
Descriptor:Integrase, SULFATE ION, 5-[(6-chloro-2-oxo-2,3-dihydro-1H-indol-1-yl)methyl]-1,3-benzodioxole-4-carboxylic acid, ...
Authors:Peat, T.S., Newman, J., Deadman, J.J., Rhodes, D.
Deposit date:2010-06-10
Release date:2011-04-27
Last modified:2012-05-02
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for a new mechanism of inhibition of HIV-1 integrase identified by fragment screening and structure-based design
ANTIVIR.CHEM.CHEMOTHER., 21, 2011
3NFA
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STRUCTURAL BASIS FOR A NEW MECHANISM OF INHIBITION OF HIV INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DESIGN
Descriptor:Integrase, SULFATE ION, 6-[(5-bromo-2,3-dioxo-2,3-dihydro-1H-indol-1-yl)methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid, ...
Authors:Peat, T.S., Newman, J., Deadman, J.J., Rhodes, D.
Deposit date:2010-06-10
Release date:2011-04-27
Last modified:2012-05-02
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for a new mechanism of inhibition of HIV-1 integrase identified by fragment screening and structure-based design
ANTIVIR.CHEM.CHEMOTHER., 21, 2011
4TNA
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FURTHER REFINEMENT OF THE STRUCTURE OF YEAST T-RNA-PHE
Descriptor:TRNAPHE, MAGNESIUM ION
Authors:Hingerty, B.E., Brown, R.S., Jack, A.
Deposit date:1978-04-12
Release date:1978-04-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Further refinement of the structure of yeast tRNAPhe.
J.Mol.Biol., 124, 1978
2LBM
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SOLUTION STRUCTURE OF THE ADD DOMAIN OF ATRX COMPLEXED WITH HISTONE TAIL H3 1-15 K9ME3
Descriptor:Transcriptional regulator ATRX, histone tail H3 K9me3, ZINC ION
Authors:Eustermann, S., Yang, J., Neuhaus, D.
Deposit date:2011-04-08
Release date:2011-06-29
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Combinatorial readout of histone H3 modifications specifies localization of ATRX to heterochromatin
Nat.Struct.Mol.Biol., 2011
2JM1
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STRUCTURES AND CHEMICAL SHIFT ASSIGNMENTS FOR THE ADD DOMAIN OF THE ATRX PROTEIN
Descriptor:Transcriptional regulator ATRX, ZINC ION
Authors:Yang, J., Neuhaus, D.
Deposit date:2006-09-13
Release date:2007-06-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural consequences of disease-causing mutations in the ATRX-DNMT3-DNMT3L (ADD) domain of the chromatin-associated protein ATRX.
Proc.Natl.Acad.Sci.USA, 104, 2007
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