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5DU3
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BU of 5du3 by Molmil
Active form of human C1-inhibitor
Descriptor: Plasma protease C1 inhibitor
Authors:Pannu, N.S, Dijk, M, Holkers, J, Voskamp, P, Giannetti, B.M, Waterreus, W.J, van Veen, H.A.
Deposit date:2015-09-18
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:How Dextran Sulfate Affects C1-inhibitor Activity: A Model for Polysaccharide Potentiation.
Structure, 24, 2016
4H0J
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BU of 4h0j by Molmil
Mutant M58C of Nostoc sp Cytochrome c6
Descriptor: Cytochrome c6, HEME C
Authors:Pannu, N.S, Skubak, P, Ubbink, M, Cavazzini, D, Rossi, G.L.
Deposit date:2012-09-08
Release date:2013-09-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The dynamic complex of cytochrome c6 and cytochrome f studied with paramagnetic NMR spectroscopy
Biochim.Biophys.Acta, 1837, 2014
4H0K
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BU of 4h0k by Molmil
Mutant m58h of Nostoc sp cytochrome c6
Descriptor: Cytochrome c6, HEME C
Authors:Pannu, N.S, Skubak, P, Cavazzini, D, Rossi, G.L, Ubbink, M.
Deposit date:2012-09-08
Release date:2013-09-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The dynamic complex of cytochrome c6 and cytochrome f studied with paramagnetic NMR spectroscopy
Biochim.Biophys.Acta, 1837, 2014
1QNU
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BU of 1qnu by Molmil
Shiga-Like Toxin I B Subunit Complexed with the Bridged-Starfish Inhibitor
Descriptor: ETHYL-CARBAMIC ACID METHYL ESTER, METHYL-CARBAMIC ACID ETHYL ESTER, Shiga toxin 1 variant B subunit, ...
Authors:Pannu, N.S, Hayakawa, K, Read, R.J.
Deposit date:1999-10-21
Release date:2000-04-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Shiga-like toxins are neutralized by tailored multivalent carbohydrate ligands.
Nature, 403, 2000
1QOH
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BU of 1qoh by Molmil
A MUTANT SHIGA-LIKE TOXIN IIE
Descriptor: SHIGA-LIKE TOXIN IIE B SUBUNIT
Authors:Pannu, N.S, Boodhoo, A, Armstrong, G.D, Clark, C.G, Brunton, J.L, Read, R.J.
Deposit date:1999-11-08
Release date:2000-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A Mutant Shiga-Like Toxin Iie Bound to its Receptor Gb(3): Structure of a Group II Shiga-Like Toxin with Altered Binding Specificity
Structure, 8, 2000
6I1J
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BU of 6i1j by Molmil
Selective formation of trinuclear transition metal centers in a trimeric helical peptide
Descriptor: A helical peptide containing a trinuclear Cu(II) center: HisAD, COPPER (II) ION
Authors:Boyle, A.L, Pannu, N.S.
Deposit date:2018-10-28
Release date:2019-09-04
Last modified:2019-09-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Selective coordination of three transition metal ions within a coiled-coil peptide scaffold.
Chem Sci, 10, 2019
5HY8
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BU of 5hy8 by Molmil
Glycation restrains allosteric transition in hemoglobin: The molecular basis of oxidative stress under hyperglycemic conditions in diabetes
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, OXYGEN MOLECULE, ...
Authors:Saraswathi, N.T, Pannu, N.S, Syakhovich, V.E, Saurabh, A, Bokut, S.B, Moras, D, Ruff, M.
Deposit date:2016-02-01
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Glycation restrains allosteric transition in hemoglobin: The molecular basis of oxidative stress under hyperglycemic conditions in diabetes
To Be Published
1B3K
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BU of 1b3k by Molmil
Plasminogen activator inhibitor-1
Descriptor: PLASMINOGEN ACTIVATOR INHIBITOR-1
Authors:Sharp, A.M, Stein, P.E, Pannu, N.S, Read, R.J.
Deposit date:1998-12-11
Release date:1999-12-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:The active conformation of plasminogen activator inhibitor 1, a target for drugs to control fibrinolysis and cell adhesion.
Structure Fold.Des., 7, 1999
5DUQ
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BU of 5duq by Molmil
Active human c1-inhibitor in complex with dextran sulfate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Plasma protease C1 inhibitor, SULFITE ION, ...
Authors:Dijk, M, Holkers, J, Voskamp, P, Giannetti, B.M, Waterreus, W.J, van Veen, H.A, Pannu, N.S.
Deposit date:2015-09-20
Release date:2016-08-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:How Dextran Sulfate Affects C1-inhibitor Activity: A Model for Polysaccharide Potentiation.
Structure, 24, 2016
5FAG
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BU of 5fag by Molmil
Alanine Racemase from Streptomyces coelicolor A3(2) with Bound Propionate Inhibitor
Descriptor: Alanine racemase, NITRATE ION, PROPANOIC ACID, ...
Authors:Tassoni, R, Pannu, N.S.
Deposit date:2015-12-11
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural and functional characterization of the alanine racemase from Streptomyces coelicolor A3(2).
Biochem. Biophys. Res. Commun., 483, 2017
5FAC
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BU of 5fac by Molmil
Alanine Racemase from Streptomyces coelicolor A3(2)
Descriptor: Alanine racemase, CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Tassoni, R, Pannu, N.S.
Deposit date:2015-12-11
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional characterization of the alanine racemase from Streptomyces coelicolor A3(2).
Biochem. Biophys. Res. Commun., 483, 2017
5FAJ
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BU of 5faj by Molmil
Alanine Racemase from Streptomyces coelicolor A3(2) in complex with D-Cycloserine
Descriptor: Alanine racemase, CHLORIDE ION, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE, ...
Authors:Tassoni, R, Pannu, N.S.
Deposit date:2015-12-11
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural and functional characterization of the alanine racemase from Streptomyces coelicolor A3(2).
Biochem. Biophys. Res. Commun., 483, 2017
5M3L
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BU of 5m3l by Molmil
Single-particle cryo-EM using alignment by classification (ABC): the structure of Lumbricus terrestris hemoglobin
Descriptor: Extracellular globin-2, Extracellular globin-3, Extracellular globin-4, ...
Authors:Afanasyev, P, Linnemayr-Seer, C, Ravelli, R.B.G, Matadeen, R, De Carlo, S, Alewijnse, B, Portugal, R.V, Pannu, N.S, Schatz, M, van Heel, M.
Deposit date:2016-10-15
Release date:2017-09-13
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Single-particle cryo-EM using alignment by classification (ABC): the structure of Lumbricus terrestris haemoglobin.
IUCrJ, 4, 2017
5NJ2
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BU of 5nj2 by Molmil
Crystal structure of BlaC from Mycobacterium tuberculosis bound to phosphate
Descriptor: 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3,6,9,12,15-PENTAOXAHEPTADECAN-1-OL, ACETATE ION, ...
Authors:Tassoni, R, Pannu, N.S, Ubbink, M.
Deposit date:2017-03-27
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Phosphate Promotes the Recovery of Mycobacterium tuberculosis beta-Lactamase from Clavulanic Acid Inhibition.
Biochemistry, 56, 2017
5OYO
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BU of 5oyo by Molmil
Crystal structure of BlaC from Mycobacterium tuberculosis
Descriptor: ACETATE ION, Beta-lactamase, GLYCEROL, ...
Authors:Tassoni, R, Pannu, N.S.
Deposit date:2017-09-11
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Phosphate Promotes the Recovery of Mycobacterium tuberculosis beta-Lactamase from Clavulanic Acid Inhibition.
Biochemistry, 56, 2017
4NFG
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BU of 4nfg by Molmil
K13R mutant of horse cytochrome c and yeast cytochrome c peroxidase complex
Descriptor: Cytochrome c, Cytochrome c peroxidase, mitochondrial, ...
Authors:Meulenbroek, E.M, Bashir, Q, Ubbink, M, Pannu, N.S.
Deposit date:2013-10-31
Release date:2014-09-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Engineering specificity in a dynamic protein complex with a single conserved mutation.
Febs J., 281, 2014
4GLE
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BU of 4gle by Molmil
SacUVDE in complex with 6-4PP-containing DNA
Descriptor: 5'-D(*CP*GP*TP*CP*GP*TP*CP*AP*AP*GP*GP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*TP*CP*CP*(64T)P*(5PY)P*GP*AP*CP*GP*AP*CP*G)-3', SULFATE ION, ...
Authors:Meulenbroek, E.M, Peron Cane, C, Jala, I, Iwai, S, Moolenaar, G.F, Goosen, N, Pannu, N.S.
Deposit date:2012-08-14
Release date:2012-11-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:UV damage endonuclease employs a novel dual-dinucleotide flipping mechanism to recognize different DNA lesions.
Nucleic Acids Res., 41, 2013
4GYD
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BU of 4gyd by Molmil
Nostoc sp Cytochrome c6
Descriptor: Cytochrome c6, HEME C
Authors:Skubak, P, Ubbink, M, Cavazzini, D, Rossi, G.L, Pannu, N.S.
Deposit date:2012-09-05
Release date:2013-09-11
Last modified:2019-10-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The dynamic complex of cytochrome c6 and cytochrome f studied with paramagnetic NMR spectroscopy
Biochim.Biophys.Acta, 1837, 2014
4HW0
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BU of 4hw0 by Molmil
Crystal structure of Sso10a-2, a DNA-binding protein from Sulfolobus solfataricus
Descriptor: DNA-binding protein Sso10a-2
Authors:Waterreus, W.J, Goosen, N, Moolenaar, G.F, Driessen, R.P.C, Dame, R.T, Pannu, N.S.
Deposit date:2012-11-07
Release date:2013-10-30
Last modified:2017-01-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Diverse architectural properties of Sso10a proteins: Evidence for a role in chromatin compaction and organization.
Sci Rep, 6, 2016
5VRQ
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BU of 5vrq by Molmil
Crystal structure of Legionella pneumophila effector AnkC
Descriptor: Ankyrin repeat-containing protein
Authors:Kozlov, G, Wong, K, Wang, W, Skubak, P, Munoz-Escobar, J, Liu, Y, Pannu, N.S, Gehring, K, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2017-05-11
Release date:2017-11-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.205 Å)
Cite:Ankyrin repeats as a dimerization module.
Biochem. Biophys. Res. Commun., 495, 2018
3BZG
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BU of 3bzg by Molmil
UVDE pH4.4
Descriptor: UV endonuclease
Authors:Meulenbroek, E.M, Paspaleva, K, Thomassen, E.A.J, Abrahams, J.P, Goosen, N, Pannu, N.S.
Deposit date:2008-01-18
Release date:2008-12-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Involvement of a carboxylated lysine in UV damage endonuclease
Protein Sci., 18, 2009
3C0L
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BU of 3c0l by Molmil
UVDE K229R
Descriptor: UV endonuclease
Authors:Meulenbroek, E.M, Paspaleva, K, Thomassen, E.A.J, Abrahams, J.P, Goosen, N, Pannu, N.S.
Deposit date:2008-01-21
Release date:2008-12-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Involvement of a carboxylated lysine in UV damage endonuclease
Protein Sci., 18, 2009
3C0S
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BU of 3c0s by Molmil
UVDE 3 metals
Descriptor: MANGANESE (II) ION, SODIUM ION, UV endonuclease
Authors:Meulenbroek, E.M, Paspaleva, K, Thomassen, E.A.J, Abrahams, J.P, Goosen, N, Pannu, N.S.
Deposit date:2008-01-21
Release date:2008-12-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Involvement of a carboxylated lysine in UV damage endonuclease
Protein Sci., 18, 2009
3BZJ
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BU of 3bzj by Molmil
UVDE K229L
Descriptor: MANGANESE (II) ION, SULFATE ION, UV endonuclease
Authors:Meulenbroek, E.M, Paspaleva, K, Thomassen, E.A.J, Abrahams, J.P, Goosen, N, Pannu, N.S.
Deposit date:2008-01-18
Release date:2008-12-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Involvement of a carboxylated lysine in UV damage endonuclease
Protein Sci., 18, 2009
3C0Q
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BU of 3c0q by Molmil
UVDE E175A
Descriptor: MANGANESE (II) ION, SULFATE ION, UV endonuclease
Authors:Meulenbroek, E.M, Paspaleva, K, Thomassen, E.A.J, Abrahams, J.P, Goosen, N, Pannu, N.S.
Deposit date:2008-01-21
Release date:2008-12-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Involvement of a carboxylated lysine in UV damage endonuclease
Protein Sci., 18, 2009

 

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