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2Z4R
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BU of 2z4r by Molmil
Crystal structure of domain III from the Thermotoga maritima replication initiation protein DnaA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chromosomal replication initiator protein dnaA, MAGNESIUM ION
Authors:Fujikawa, N, Ozaki, S, Kagawa, W, Park, S.-Y, Katayama, T, Kurumizaka, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-06-25
Release date:2008-02-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:A Common Mechanism for the ATP-DnaA-dependent Formation of Open Complexes at the Replication Origin
J.Biol.Chem., 283, 2008
2Z4S
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BU of 2z4s by Molmil
Crystal structure of domain III from the Thermotoga maritima replication initiation protein DnaA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chromosomal replication initiator protein dnaA, MAGNESIUM ION
Authors:Fujikawa, N, Ozaki, S, Kagawa, W, Park, S.-Y, Katayama, T, Kurumizaka, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-06-25
Release date:2008-02-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Common Mechanism for the ATP-DnaA-dependent Formation of Open Complexes at the Replication Origin
J.Biol.Chem., 283, 2008
4XZD
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BU of 4xzd by Molmil
Crystal Structure of Wild-type HasA from Yersinia pseudotuberculosis
Descriptor: Extracellular heme acquisition hemophore HasA, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kanadani, M, Hino, T, Nagano, S, Sato, T, Ozaki, S.
Deposit date:2015-02-04
Release date:2015-08-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of heme acquisition system A from Yersinia pseudotuberculosis (HasAypt): Roles of the axial ligand Tyr75 and two distal arginines in heme binding
J.Inorg.Biochem., 151, 2015
4Y1Q
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BU of 4y1q by Molmil
Crystal Structure of HasA mutant Y75A monomer from Yersinia pseudotuberculosis
Descriptor: Extracellular heme acquisition hemophore HasA, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nagano, S, Hino, T, Kanadani, M, Ozaki, S, Sato, T.
Deposit date:2015-02-08
Release date:2015-08-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The crystal structure of heme acquisition system A from Yersinia pseudotuberculosis (HasAypt): Roles of the axial ligand Tyr75 and two distal arginines in heme binding
J.Inorg.Biochem., 151, 2015
4Y4S
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BU of 4y4s by Molmil
Crystal Structure of Y75A HasA dimer from Yersinia pseudotuberculosis
Descriptor: Extracellular heme acquisition hemophore HasA, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Hino, T, Kanadani, M, Muroki, T, Ishimaru, Y, Wada, Y, Sato, T, Ozaki, S.
Deposit date:2015-02-11
Release date:2015-08-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure of heme acquisition system A from Yersinia pseudotuberculosis (HasAypt): Roles of the axial ligand Tyr75 and two distal arginines in heme binding
J.Inorg.Biochem., 151, 2015
2YVA
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BU of 2yva by Molmil
Crystal structure of Escherichia coli DiaA
Descriptor: DnaA initiator-associating protein diaA
Authors:Keyamura, K, Fujikawa, N, Ishida, T, Ozaki, S, Suetsugu, M, Kagawa, W, Yokoyama, S, Kurumizaka, H, Katayama, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-10
Release date:2008-01-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The interaction of DiaA and DnaA regulates the replication cycle in E. coli by directly promoting ATP DnaA-specific initiation complexes
Genes Dev., 21, 2007
1LUE
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BU of 1lue by Molmil
RECOMBINANT SPERM WHALE MYOGLOBIN H64D/V68A/D122N MUTANT (MET)
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Phillips Jr, G.N.
Deposit date:2002-05-22
Release date:2003-11-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular engineering of myoglobin: influence of residue 68 on the rate and the enantioselectivity of oxidation reactions catalyzed by H64D/V68X myoglobin
Biochemistry, 42, 2003
1O16
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BU of 1o16 by Molmil
RECOMBINANT SPERM WHALE MYOGLOBIN H64D/V68S/D122N MUTANT (MET)
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Phillips Jr, G.N.
Deposit date:2002-10-25
Release date:2003-11-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Molecular engineering of myoglobin: influence of residue 68 on the rate and the enantioselectivity of oxidation reactions catalyzed by H64D/V68X myoglobin
Biochemistry, 42, 2003
6JEM
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BU of 6jem by Molmil
Structure of Phytolacca americana UGT2 complexed with UDP-2fluoro-glucose and resveratrol
Descriptor: Glycosyltransferase, RESVERATROL, URIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO-ALPHA-D-GLUCOSE
Authors:Maharjan, R, Fukuda, Y, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
Deposit date:2019-02-06
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:An Ambidextrous Polyphenol GlycosyltransferasePaGT2 fromPhytolacca americana.
Biochemistry, 59, 2020
6JEN
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BU of 6jen by Molmil
Structure of Phytolacca americana UGT2 complexed with UDP-2fluoro-glucose and pterostilbene
Descriptor: Glycosyltransferase, Pterostilbene, URIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO-ALPHA-D-GLUCOSE
Authors:Maharjan, R, Fukuda, Y, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
Deposit date:2019-02-06
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:An Ambidextrous Polyphenol GlycosyltransferasePaGT2 fromPhytolacca americana.
Biochemistry, 59, 2020
6JEL
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BU of 6jel by Molmil
Structure of Phytolacca americana apo UGT2
Descriptor: Glycosyltransferase
Authors:Maharjan, R, Fukuda, Y, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
Deposit date:2019-02-06
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:An Ambidextrous Polyphenol GlycosyltransferasePaGT2 fromPhytolacca americana.
Biochemistry, 59, 2020
6LZY
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BU of 6lzy by Molmil
Structure of Phytolacca americana UGT3 with 18-crown-6
Descriptor: 1,2-ETHANEDIOL, 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, BROMIDE ION, ...
Authors:Maharjan, R, Fukuda, Y, Nakayama, T, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
Deposit date:2020-02-19
Release date:2020-06-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crown-ether-mediated crystal structures of the glycosyltransferase PaGT3 from Phytolacca americana.
Acta Crystallogr D Struct Biol, 76, 2020
6LZX
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BU of 6lzx by Molmil
Structure of Phytolacca americana UGT3 with 15-crown-5
Descriptor: 1,2-ETHANEDIOL, 1,4,7,10,13-pentaoxacyclopentadecane, BROMIDE ION, ...
Authors:Maharjan, R, Fukuda, Y, Nakayama, T, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
Deposit date:2020-02-19
Release date:2020-06-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:Crown-ether-mediated crystal structures of the glycosyltransferase PaGT3 from Phytolacca americana.
Acta Crystallogr D Struct Biol, 76, 2020
7VEK
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BU of 7vek by Molmil
Crystal structure of Phytolacca americana UGT3 with capsaicin and UDP-2fluoroglucose
Descriptor: (6E)-N-(4-hydroxy-3-methoxybenzyl)-8-methylnon-6-enamide, 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, Glycosyltransferase, ...
Authors:Maharjan, R, Fukuda, Y, Nakayama, T, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
Deposit date:2021-09-09
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for substrate recognition in the Phytolacca americana glycosyltransferase PaGT3.
Acta Crystallogr D Struct Biol, 78, 2022
7VEJ
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BU of 7vej by Molmil
Crystal structure of Phytolacca americana UGT3 with kaempferol and UDP-2fluoroglucose
Descriptor: 1,2-ETHANEDIOL, 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, 3,5,7-TRIHYDROXY-2-(4-HYDROXYPHENYL)-4H-CHROMEN-4-ONE, ...
Authors:Maharjan, R, Fukuda, Y, Nakayama, T, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
Deposit date:2021-09-09
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for substrate recognition in the Phytolacca americana glycosyltransferase PaGT3.
Acta Crystallogr D Struct Biol, 78, 2022
7VEL
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BU of 7vel by Molmil
Crystal structure of Phytolacca americana UGT3 with UDP-2fluoroglucose
Descriptor: 1,2-ETHANEDIOL, 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, Glycosyltransferase, ...
Authors:Maharjan, R, Fukuda, Y, Nakayama, T, Nakayama, T, Hamada, H, Ozaki, S, Inoue, T.
Deposit date:2021-09-09
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for substrate recognition in the Phytolacca americana glycosyltransferase PaGT3.
Acta Crystallogr D Struct Biol, 78, 2022
1OFK
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BU of 1ofk by Molmil
RECOMBINANT SPERM WHALE MYOGLOBIN F43H, H64L MUTANT (MET)
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Liong, E.C, Phillips Jr, G.N.
Deposit date:1998-06-03
Release date:1998-11-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effects of the location of distal histidine in the reaction of myoglobin with hydrogen peroxide.
J.Biol.Chem., 274, 1999
1OFJ
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BU of 1ofj by Molmil
RECOMBINANT SPERM WHALE MYOGLOBIN L29H/H64L/D122N MUTANT (WITH INITIATOR MET)
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Liong, E.C, Phillips Jr, G.N.
Deposit date:1998-01-30
Release date:1998-05-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effects of the location of distal histidine in the reaction of myoglobin with hydrogen peroxide.
J.Biol.Chem., 274, 1999
5IDM
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BU of 5idm by Molmil
Bifunctional histidine kinase CckA (domain, CA) in complex with c-di-GMP and AMPPNP/Mg2+
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Cell cycle histidine kinase CckA, MAGNESIUM ION, ...
Authors:Dubey, B.N, Schirmer, T.
Deposit date:2016-02-24
Release date:2016-10-05
Last modified:2022-09-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cyclic di-GMP mediates a histidine kinase/phosphatase switch by noncovalent domain cross-linking.
Sci Adv, 2, 2016
5IDJ
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BU of 5idj by Molmil
Bifunctional histidine kinase CckA (domains DHp-CA) in complex with ADP/Mg2+
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Histidine kinase, MAGNESIUM ION
Authors:Dubey, B.N, Schirmer, T.
Deposit date:2016-02-24
Release date:2016-10-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Cyclic di-GMP mediates a histidine kinase/phosphatase switch by noncovalent domain cross-linking.
Sci Adv, 2, 2016
3W8M
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BU of 3w8m by Molmil
Crystal Structure of HasAp with Iron Salophen
Descriptor: 2,2'-[1,2-PHENYLENEBIS(NITRILOMETHYLIDYNE)]BIS[PHENOLATO]](2-)-N,N',O,O']-IRON, Heme acquisition protein HasAp
Authors:Shirataki, C, Shoji, O, Sugimoto, H, Shiro, Y, Watanabe, Y.
Deposit date:2013-03-19
Release date:2014-01-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Inhibition of Heme Uptake in Pseudomonas aeruginosa by its Hemophore (HasAp ) Bound to Synthetic Metal Complexes
Angew.Chem.Int.Ed.Engl., 53, 2014
3W8O
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BU of 3w8o by Molmil
Crystal Structure of HasAp with Iron Phthalocyanine
Descriptor: Heme acquisition protein HasAp, [29H,31H-phthalocyaninato(2-)-kappa~4~N~29~,N~30~,N~31~,N~32~]iron
Authors:Shirataki, C, Shoji, O, Terada, M, Sugimoto, H, Shiro, Y, Watanabe, Y.
Deposit date:2013-03-20
Release date:2014-01-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Inhibition of Heme Uptake in Pseudomonas aeruginosa by its Hemophore (HasAp ) Bound to Synthetic Metal Complexes
Angew.Chem.Int.Ed.Engl., 53, 2014
3WAH
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BU of 3wah by Molmil
Crystal Structure of HasAp with Iron MesoporphyrinIX
Descriptor: Heme acquisition protein HasAp, Mesoheme
Authors:Shirataki, C, Shoji, O, Sugimoto, H, Shiro, Y, Watanabe, Y.
Deposit date:2013-05-02
Release date:2014-01-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Inhibition of Heme Uptake in Pseudomonas aeruginosa by its Hemophore (HasAp ) Bound to Synthetic Metal Complexes
Angew.Chem.Int.Ed.Engl., 53, 2014

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PDB entries from 2024-03-27

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