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3FVQ
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BU of 3fvq by Molmil
Crystal structure of the nucleotide binding domain FbpC complexed with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Fe(3+) ions import ATP-binding protein fbpC
Authors:Newstead, S, Bilton, P, Carpenter, E.P, Campopiano, D, Iwata, S.
Deposit date:2009-01-16
Release date:2009-08-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into how nucleotide-binding domains power ABC transport.
Structure, 17, 2009
7OXE
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BU of 7oxe by Molmil
Crystal structure of the KDEL receptor bound to HDEF peptide at pH 6.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ER lumen protein-retaining receptor 2, THR-ALA-GLU-HIS-ASP-GLU-PHE
Authors:Newstead, S, Parker, J.L.
Deposit date:2021-06-22
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.283 Å)
Cite:Crystal structure of the KDEL receptor bound to HDEF peptide at pH 6.0
To Be Published
7OYE
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BU of 7oye by Molmil
Crystal structure of the KDEL receptor bound to HDEL peptide at pH 7.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CARBON DIOXIDE, ER lumen protein-retaining receptor 2, ...
Authors:Newstead, S, Braeuer, P.
Deposit date:2021-06-24
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Crystal structure of the KDEL receptor bound to HDEL peptide at pH 7.0
To Be Published
2XUT
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BU of 2xut by Molmil
Crystal structure of a proton dependent oligopeptide (POT) family transporter.
Descriptor: PROTON/PEPTIDE SYMPORTER FAMILY PROTEIN
Authors:Newstead, S, Drew, D, Cameron, A.D, Postis, V.L, Xia, X, Fowler, P.W, Ingram, J.C, Carpenter, E.P, Sansom, M.S.P, McPherson, M.J, Baldwin, S.A, Iwata, S.
Deposit date:2010-10-21
Release date:2010-12-15
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (3.62 Å)
Cite:Crystal Structure of a Prokaryotic Homologue of the Mammalian Oligopeptide-Proton Symporters, Pept1 and Pept2.
Embo J., 30, 2011
2BER
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BU of 2ber by Molmil
Y370G Active Site Mutant of the Sialidase from Micromonospora viridifaciens in complex with beta-Neu5Ac (sialic acid).
Descriptor: BACTERIAL SIALIDASE, N-acetyl-beta-neuraminic acid, SODIUM ION
Authors:Newstead, S, Watson, J.N, Bennet, A.J, Taylor, G.L.
Deposit date:2004-11-30
Release date:2005-04-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and Mechanism of Action of an Inverting Mutant Sialidase.
Biochemistry, 44, 2005
6QSK
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BU of 6qsk by Molmil
Crystal structure of a nucleotide sugar transporter with bound nucleotide monophosphate.
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, GDP-mannose transporter 1, GUANOSINE-5'-MONOPHOSPHATE, ...
Authors:Newstead, S, Parker, J.L.
Deposit date:2019-02-21
Release date:2019-10-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.394 Å)
Cite:Structural basis for substrate specificity and regulation of nucleotide sugar transporters in the lipid bilayer.
Nat Commun, 10, 2019
6ZXR
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BU of 6zxr by Molmil
Crystal structure of the KDEL receptor bound to RDEL peptide at pH 6.0
Descriptor: ALA-GLU-ARG-ASP-GLU-LEU, ER lumen protein-retaining receptor 2
Authors:Newstead, S, Parker, J.L.
Deposit date:2020-07-30
Release date:2021-02-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:A signal capture and proofreading mechanism for the KDEL-receptor explains selectivity and dynamic range in ER retrieval.
Elife, 10, 2021
1W8O
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BU of 1w8o by Molmil
Contribution of the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora viridifaciens
Descriptor: BACTERIAL SIALIDASE, CITRIC ACID, GLYCEROL, ...
Authors:Newstead, S, Watson, J.N, Dookhun, V, Bennet, A.J, Taylor, G.
Deposit date:2004-09-24
Release date:2004-09-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Contribution of the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora Viridifaciens
FEBS Lett., 577, 2004
1W8N
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BU of 1w8n by Molmil
Contribution of the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora viridifaciens.
Descriptor: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, BACTERIAL SIALIDASE, SODIUM ION, ...
Authors:Newstead, S, Watson, J.N, Dookhun, V, Bennet, A.J, Taylor, G.
Deposit date:2004-09-24
Release date:2004-09-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Contribution of the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora Viridifaciens
FEBS Lett., 577, 2004
1WCQ
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BU of 1wcq by Molmil
Mutagenesis of the Nucleophilic Tyrosine in a Bacterial Sialidase to Phenylalanine.
Descriptor: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, GLYCEROL, SIALIDASE, ...
Authors:Newstead, S, Watson, J.N, Bennet, A.J, Taylor, G.
Deposit date:2004-11-19
Release date:2005-10-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Two Nucleophilic Mutants of the Micromonospora Viridifaciens Sialidase Operate with Retention of Configuration by Two Different Mechanisms.
Chembiochem, 6, 2005
5OGK
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BU of 5ogk by Molmil
Crystal structure of a nucleotide sugar transporter with bound nucleotide sugar.
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, GDP-mannose transporter 1, GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE
Authors:Newstead, S, Parker, J.L.
Deposit date:2017-07-13
Release date:2017-11-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis of nucleotide sugar transport across the Golgi membrane.
Nature, 551, 2017
5OGE
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BU of 5oge by Molmil
Crystal structure of a nucleotide sugar transporter
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, GDP-mannose transporter 1
Authors:Newstead, S, Parker, J.L.
Deposit date:2017-07-12
Release date:2017-11-22
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Structural basis of nucleotide sugar transport across the Golgi membrane.
Nature, 551, 2017
6EI3
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BU of 6ei3 by Molmil
Crystal structure of auto inhibited POT family peptide transporter
Descriptor: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, Proton-dependent oligopeptide transporter family protein
Authors:Newstead, S, Brinth, A, Vogeley, L, Caffrey, M.
Deposit date:2017-09-17
Release date:2017-11-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Proton movement and coupling in the POT family of peptide transporters.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4UVM
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BU of 4uvm by Molmil
In meso crystal structure of the POT family transporter PepTSo
Descriptor: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, GLUTATHIONE UPTAKE TRANSPORTER
Authors:Lyons, J.A, Solcan, N, Caffrey, M, Newstead, S.
Deposit date:2014-08-07
Release date:2015-02-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Gating Topology of the Proton-Coupled Oligopeptide Symporters.
Structure, 23, 2015
6BQO
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BU of 6bqo by Molmil
Structure of a dual topology fluoride channel with monobody S8
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, FLUORIDE ION, Fluoride ion transporter CrcB, ...
Authors:Stockbridge, R.B, Newstead, S, McIlwain, B.C.
Deposit date:2017-11-28
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Cork-in-Bottle Occlusion of Fluoride Ion Channels by Crystallization Chaperones.
Structure, 26, 2018
5L7I
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BU of 5l7i by Molmil
Structure of human Smoothened in complex with Vismodegib
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-chloranyl-~{N}-(4-chloranyl-3-pyridin-2-yl-phenyl)-4-methylsulfonyl-benzamide, SODIUM ION, ...
Authors:Byrne, E.X.B, Sircar, R, Miller, P.S, Hedger, G, Luchetti, G, Nachtergaele, S, Tully, M.D, Mydock-McGrane, L, Covey, D.F, Rambo, R.F, Sansom, M.S.P, Newstead, S, Rohatgi, R, Siebold, C.
Deposit date:2016-06-03
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis of Smoothened regulation by its extracellular domains.
Nature, 535, 2016
5L7D
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BU of 5l7d by Molmil
Structure of human Smoothened in complex with cholesterol
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, SODIUM ION, ...
Authors:Byrne, E.F.X, Sircar, R, Miller, P.S, Hedger, G, Luchetti, G, Nachtergaele, S, Tully, M.D, Mydock-McGrane, L, Covey, D.F, Rambo, R.P, Sansom, M.S.P, Newstead, S, Rohatgi, R, Siebold, C.
Deposit date:2016-06-03
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis of Smoothened regulation by its extracellular domains.
Nature, 535, 2016
8OMU
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BU of 8omu by Molmil
Cryo-EM structure of rat SLC22A6 bound to alpha-ketoglutaric acid in a low occupancy state
Descriptor: Solute carrier family 22 member 6, Synthetic nanobody (Sybody)
Authors:Parker, J.L, Kato, T, Newstead, S.
Deposit date:2023-03-31
Release date:2023-07-19
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Molecular basis for selective uptake and elimination of organic anions in the kidney by OAT1.
Nat.Struct.Mol.Biol., 30, 2023
8P6A
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BU of 8p6a by Molmil
cryo-EM structure of human SLC15A4 in outward-open state
Descriptor: Solute carrier family 15 member 4
Authors:Parker, J.L, Kato, T, Newstead, S.
Deposit date:2023-05-25
Release date:2023-06-07
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:cryo-EM structure of human SLC15A4 PHT1 in outward-open state
To be published
6Y7V
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BU of 6y7v by Molmil
Crystal structure of the KDEL receptor bound to HDEL peptide at pH 6.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CARBON DIOXIDE, ER lumen protein-retaining receptor 2, ...
Authors:Braeuer, P, Newstead, S.
Deposit date:2020-03-02
Release date:2021-02-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.241 Å)
Cite:A signal capture and proofreading mechanism for the KDEL-receptor explains selectivity and dynamic range in ER retrieval.
Elife, 10, 2021
8APY
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BU of 8apy by Molmil
Crystal structure of the H12A variant of the KDEL receptor bound to sybody
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ER lumen protein-retaining receptor 2, Synthetic nanobody
Authors:Parker, J.L, Smith, K, Newstead, S.
Deposit date:2022-08-10
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structure of the H12A variant of the KDEL receptor bound to sybody
To Be Published
8BVS
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BU of 8bvs by Molmil
Cryo-EM structure of rat SLC22A6 bound to tenofovir
Descriptor: CHLORIDE ION, Solute carrier family 22 member 6, Synthetic nanobody (Sybody), ...
Authors:Parker, J.L, Kato, T, Newstead, S.
Deposit date:2022-12-05
Release date:2023-07-19
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:Molecular basis for selective uptake and elimination of organic anions in the kidney by OAT1.
Nat.Struct.Mol.Biol., 30, 2023
8BVT
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BU of 8bvt by Molmil
Cryo-EM structure of rat SLC22A6 bound to probenecid
Descriptor: 4-(dipropylsulfamoyl)benzoic acid, Solute carrier family 22 member 6, Synthetic nanobody (Sybody)
Authors:Parker, J.L, Kato, T, Newstead, S.
Deposit date:2022-12-06
Release date:2023-07-19
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.94 Å)
Cite:Molecular basis for selective uptake and elimination of organic anions in the kidney by OAT1.
Nat.Struct.Mol.Biol., 30, 2023
8BW7
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BU of 8bw7 by Molmil
Cryo-EM structure of rat SLC22A6 bound to alpha-ketoglutaric acid
Descriptor: 2-OXOGLUTARIC ACID, CHLORIDE ION, Solute carrier family 22 member 6, ...
Authors:Parker, J.L, Kato, T, Newstead, S.
Deposit date:2022-12-06
Release date:2023-07-19
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Molecular basis for selective uptake and elimination of organic anions in the kidney by OAT1.
Nat.Struct.Mol.Biol., 30, 2023
8BVR
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BU of 8bvr by Molmil
Cryo-EM structure of rat SLC22A6 in the apo state
Descriptor: PHOSPHATE ION, Solute carrier family 22 member 6, Synthetic nanobody (Sybody)
Authors:Parker, J.L, Kato, T, Newstead, S.
Deposit date:2022-12-05
Release date:2023-07-19
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Molecular basis for selective uptake and elimination of organic anions in the kidney by OAT1.
Nat.Struct.Mol.Biol., 30, 2023

 

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