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5SIC
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BU of 5sic by Molmil
MOLECULAR RECOGNITION AT THE ACTIVE SITE OF SUBTILISIN BPN': CRYSTALLOGRAPHIC STUDIES USING GENETICALLY ENGINEERED PROTEINACEOUS INHIBITOR SSI (STREPTOMYCES SUBTILISIN INHIBITOR)
Descriptor: CALCIUM ION, SUBTILISIN BPN', SUBTILISIN INHIBITOR (SSI)
Authors:Mitsui, Y, Takeuchi, Y, Nakamura, K.T.
Deposit date:1991-11-18
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular recognition at the active site of subtilisin BPN': crystallographic studies using genetically engineered proteinaceous inhibitor SSI (Streptomyces subtilisin inhibitor).
Protein Eng., 4, 1991
1BOL
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BU of 1bol by Molmil
THE CRYSTAL STRUCTURE OF RIBONUCLEASE RH FROM RHIZOPUS NIVEUS AT 2.0 A RESOLUTION
Descriptor: PROTEIN (RIBONUCLEASE RH)
Authors:Kurihara, H, Nakamura, K.T.
Deposit date:1998-08-05
Release date:1998-08-12
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of ribonuclease Rh from Rhizopus niveus at 2.0 A resolution.
J.Mol.Biol., 255, 1996
1RMS
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BU of 1rms by Molmil
CRYSTAL STRUCTURES OF RIBONUCLEASE MS COMPLEXED WITH 3'-GUANYLIC ACID A GP*C ANALOGUE, 2'-DEOXY-2'-FLUOROGUANYLYL-3',5'-CYTIDINE
Descriptor: GUANOSINE-3'-MONOPHOSPHATE, RIBONUCLEASE MS
Authors:Nonaka, T, Mitsui, Y, Nakamura, K.T.
Deposit date:1991-12-02
Release date:1992-07-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of ribonuclease Ms (as a ribonuclease T1 homologue) complexed with a guanylyl-3',5'-cytidine analogue.
Biochemistry, 32, 1993
1RDS
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BU of 1rds by Molmil
CRYSTAL STRUCTURE OF RIBONUCLEASE MS (AS RIBONUCLEASE T1 HOMOLOGUE) COMPLEXED WITH A GUANYLYL-3',5'-CYTIDINE ANALOGUE
Descriptor: 2'-FLUOROGUANYLYL-(3'-5')-PHOSPHOCYTIDINE, RIBONUCLEASE MS
Authors:Nonaka, T, Nakamura, K.T, Mitsui, Y.
Deposit date:1993-05-14
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of ribonuclease Ms (as a ribonuclease T1 homologue) complexed with a guanylyl-3',5'-cytidine analogue.
Biochemistry, 32, 1993
1DIX
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BU of 1dix by Molmil
CRYSTAL STRUCTURE OF RNASE LE
Descriptor: EXTRACELLULAR RIBONUCLEASE LE
Authors:Tanaka, N, Nakamura, K.T.
Deposit date:1999-11-30
Release date:2000-09-06
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of a plant ribonuclease, RNase LE.
J.Mol.Biol., 298, 2000
1IFA
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BU of 1ifa by Molmil
THREE-DIMENSIONAL CRYSTAL STRUCTURE OF RECOMBINANT MURINE INTERFERON-BETA
Descriptor: ASPARAGINE, INTERFERON-BETA
Authors:Mitsui, Y, Senda, T, Matsuda, S, Kawano, G, Nakamura, K.T, Shimizu, H.
Deposit date:1991-10-29
Release date:1994-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Three-dimensional crystal structure of recombinant murine interferon-beta.
EMBO J., 11, 1992
2TLD
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BU of 2tld by Molmil
CRYSTAL STRUCTURE OF AN ENGINEERED SUBTILISIN INHIBITOR COMPLEXED WITH BOVINE TRYPSIN
Descriptor: STREPTOMYCES SUBTILISIN INHIBITOR (SSI), TRYPSIN
Authors:Mitsui, Y, Takeuchi, Y, Nonaka, T, Nakamura, K.T.
Deposit date:1991-09-16
Release date:1992-07-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of an engineered subtilisin inhibitor complexed with bovine trypsin.
Proc.Natl.Acad.Sci.USA, 89, 1992
2SIC
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BU of 2sic by Molmil
REFINED CRYSTAL STRUCTURE OF THE COMPLEX OF SUBTILISIN BPN' AND STREPTOMYCES SUBTILISIN INHIBITOR AT 1.8 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, STREPTOMYCES SUBTILISIN INHIBITOR (SSI), SUBTILISIN BPN'
Authors:Mitsui, Y, Takeuchi, Y, Hirono, S, Akagawa, H, Nakamura, K.T.
Deposit date:1991-04-01
Release date:1993-04-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Refined crystal structure of the complex of subtilisin BPN' and Streptomyces subtilisin inhibitor at 1.8 A resolution.
J.Mol.Biol., 221, 1991
2DLC
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BU of 2dlc by Molmil
Crystal structure of the ternary complex of yeast tyrosyl-tRNA synthetase
Descriptor: MAGNESIUM ION, O-(ADENOSINE-5'-O-YL)-N-(L-TYROSYL)PHOSPHORAMIDATE, T-RNA (76-MER), ...
Authors:Tsunoda, M, Kusakabe, Y, Tanaka, N, Nakamura, K.T.
Deposit date:2006-04-18
Release date:2007-06-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for recognition of cognate tRNA by tyrosyl-tRNA synthetase from three kingdoms.
Nucleic Acids Res., 35, 2007
1J2T
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BU of 1j2t by Molmil
Creatininase Mn
Descriptor: MANGANESE (II) ION, SULFATE ION, ZINC ION, ...
Authors:Yoshimoto, T, Tanaka, N, Kanada, N, Inoue, T, Nakajima, Y, Haratake, M, Nakamura, K.T, Xu, Y, Ito, K.
Deposit date:2003-01-11
Release date:2004-01-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of creatininase reveal the substrate binding site and provide an insight into the catalytic mechanism
J.Mol.Biol., 337, 2004
1J2U
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BU of 1j2u by Molmil
Creatininase Zn
Descriptor: SULFATE ION, ZINC ION, creatinine amidohydrolase
Authors:Yoshimoto, T, Tanaka, N, Kanada, N, Inoue, T, Nakajima, Y, Haratake, M, Nakamura, K.T, Xu, Y, Ito, K.
Deposit date:2003-01-11
Release date:2004-01-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of creatininase reveal the substrate binding site and provide an insight into the catalytic mechanism
J.Mol.Biol., 337, 2004
1IRI
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BU of 1iri by Molmil
Crystal structure of human autocrine motility factor complexed with an inhibitor
Descriptor: ERYTHOSE-4-PHOSPHATE, autocrine motility factor
Authors:Tanaka, N, Haga, A, Uemura, H, Akiyama, H, Funasaka, T, Nagase, H, Raz, A, Nakamura, K.T.
Deposit date:2001-10-08
Release date:2002-06-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Inhibition mechanism of cytokine activity of human autocrine motility factor examined by crystal structure analyses and site-directed mutagenesis studies.
J.Mol.Biol., 318, 2002
1JIQ
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BU of 1jiq by Molmil
Crystal Structure of Human Autocrine Motility Factor
Descriptor: autocrine motility factor
Authors:Tanaka, N, Haga, A, Uemura, H, Akiyama, H, Funasaka, T, Nagase, H, Raz, A, Nakamura, K.T.
Deposit date:2001-07-02
Release date:2002-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Inhibition mechanism of cytokine activity of human autocrine motility factor examined by crystal structure analyses and site-directed mutagenesis studies.
J.Mol.Biol., 318, 2002
1KOL
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BU of 1kol by Molmil
Crystal structure of formaldehyde dehydrogenase
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, ZINC ION, ...
Authors:Tanaka, N, Kusakabe, Y, Ito, K, Yoshimoto, T, Nakamura, K.T.
Deposit date:2001-12-21
Release date:2002-12-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of Formaldehyde Dehydrogenase from Pseudomonas putida: the Structural Origin of the Tightly Bound Cofactor in Nicotinoprotein Dehydrogenases
J.mol.biol., 324, 2002
2ZAT
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BU of 2zat by Molmil
Crystal structure of a mammalian reductase
Descriptor: Dehydrogenase/reductase SDR family member 4, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Tanaka, N, Aoki, K, Nakamura, K.T.
Deposit date:2007-10-10
Release date:2008-04-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular basis for peroxisomal localization of tetrameric carbonyl reductase.
Structure, 16, 2008
1V7Z
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BU of 1v7z by Molmil
creatininase-product complex
Descriptor: MANGANESE (II) ION, N-[(E)-AMINO(IMINO)METHYL]-N-METHYLGLYCINE, SULFATE ION, ...
Authors:Yoshimoto, T, Tanaka, N, Kanada, N, Inoue, T, Nakajima, Y, Haratake, M, Nakamura, K.T, Xu, Y, Ito, K.
Deposit date:2003-12-26
Release date:2004-01-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of creatininase reveal the substrate binding site and provide an insight into the catalytic mechanism
J.Mol.Biol., 337, 2004
1V8B
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BU of 1v8b by Molmil
Crystal structure of a hydrolase
Descriptor: ADENOSINE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, adenosylhomocysteinase
Authors:Tanaka, N, Nakanishi, M, Kusakabe, Y, Shiraiwa, K, Kitade, Y, Nakamura, K.T.
Deposit date:2004-01-03
Release date:2004-10-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of S-Adenosyl-l-Homocysteine Hydrolase from the Human Malaria Parasite Plasmodium falciparum
J.Mol.Biol., 343, 2004
1WDY
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BU of 1wdy by Molmil
Crystal structure of ribonuclease
Descriptor: 2-5A-dependent ribonuclease, 5'-O-MONOPHOSPHORYLADENYLYL(2'->5')ADENYLYL(2'->5')ADENOSINE
Authors:Tanaka, N, Nakanishi, M, Kusakabe, Y, Goto, Y, Kitade, Y, Nakamura, K.T.
Deposit date:2004-05-19
Release date:2004-10-05
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for recognition of 2',5'-linked oligoadenylates by human ribonuclease L
Embo J., 23, 2004
1WRJ
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BU of 1wrj by Molmil
Crystal structure of O6-methylguanine methyltransferase from Sulfolobus tokodaii
Descriptor: Methylated-DNA--protein-cysteine methyltransferase
Authors:Kuroda, M, Tsunoda, M, Nakamura, K.T.
Deposit date:2004-10-18
Release date:2005-12-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of O6-methylguanine methyltransferase from Sulfolobus tokodaii
To be Published
1WM1
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BU of 1wm1 by Molmil
Crystal Structure of Prolyl Aminopeptidase, Complex with Pro-TBODA
Descriptor: (5-TERT-BUTYL-1,3,4-OXADIAZOL-2-YL)[(2R)-PYRROLIDIN-2-YL]METHANONE, Proline iminopeptidase
Authors:Nakajima, Y, Inoue, T, Ito, K, Tozaka, T, Hatakeyama, S, Tanaka, N, Nakamura, K.T, Yoshimoto, T.
Deposit date:2004-07-01
Release date:2004-07-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Novel inhibitor for prolyl aminopeptidase from Serratia marcescens and studies on the mechanism of substrate recognition of the enzyme using the inhibitor
ARCH.BIOCHEM.BIOPHYS., 416, 2003
1WOJ
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BU of 1woj by Molmil
Crystal structure of human phosphodiesterase
Descriptor: 2',3'-cyclic-nucleotide 3'-phosphodiesterase, PHOSPHATE ION
Authors:Sakamoto, Y, Tanaka, N, Ichimiya, T, Kurihara, T, Nakamura, K.T.
Deposit date:2004-08-19
Release date:2005-03-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the catalytic fragment of human brain 2',3'-cyclic-nucleotide 3'-phosphodiesterase
J.Mol.Biol., 346, 2005
1WTA
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BU of 1wta by Molmil
Crystal Structure of 5'-Deoxy-5'-methylthioadenosine from Aeropyrum pernix (R32 form)
Descriptor: 5'-methylthioadenosine phosphorylase, ADENINE, PHOSPHATE ION
Authors:Tsunoda, M, Murakami, Y, Nakamura, K.T.
Deposit date:2004-11-18
Release date:2006-02-07
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal Structure of 5'-Deoxy-5'-methylthioadenosine from Aeropyrum pernix (R32 form)
To be Published
2CXS
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BU of 2cxs by Molmil
Crystal structure of mouse AMF / F6P complex
Descriptor: 6-O-phosphono-beta-D-fructofuranose, GLYCEROL, Glucose-6-phosphate isomerase
Authors:Tanaka, N, Haga, A, Naba, N, Shiraiwa, K, Kusakabe, Y, Hashimoto, K, Funasaka, T, Nagase, H, Raz, A, Nakamura, K.T.
Deposit date:2005-06-30
Release date:2006-05-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors
J.Mol.Biol., 356, 2006
2CXR
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BU of 2cxr by Molmil
Crystal structure of mouse AMF / 6PG complex
Descriptor: 6-PHOSPHOGLUCONIC ACID, GLYCEROL, Glucose-6-phosphate isomerase
Authors:Tanaka, N, Haga, A, Naba, N, Shiraiwa, K, Kusakabe, Y, Hashimoto, K, Funasaka, T, Nagase, H, Raz, A, Nakamura, K.T.
Deposit date:2005-06-30
Release date:2006-05-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors
J.Mol.Biol., 356, 2006
2CXT
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BU of 2cxt by Molmil
Crystal structure of mouse AMF / F6P complex
Descriptor: 6-O-phosphono-beta-D-fructofuranose, GLYCEROL, Glucose-6-phosphate isomerase
Authors:Tanaka, N, Haga, A, Naba, N, Shiraiwa, K, Kusakabe, Y, Hashimoto, K, Funasaka, T, Nagase, H, Raz, A, Nakamura, K.T.
Deposit date:2005-06-30
Release date:2006-05-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors
J.Mol.Biol., 356, 2006

 

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