Author results

2SIC
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REFINED CRYSTAL STRUCTURE OF THE COMPLEX OF SUBTILISIN BPN' AND STREPTOMYCES SUBTILISIN INHIBITOR AT 1.8 ANGSTROMS RESOLUTION
Descriptor:SUBTILISIN BPN', STREPTOMYCES SUBTILISIN INHIBITOR (SSI), CALCIUM ION
Authors:Mitsui, Y., Takeuchi, Y., Hirono, S., Akagawa, H., Nakamura, K.T.
Deposit date:1991-04-01
Release date:1993-04-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Refined crystal structure of the complex of subtilisin BPN' and Streptomyces subtilisin inhibitor at 1.8 A resolution.
J.Mol.Biol., 221, 1991
3SIC
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MOLECULAR RECOGNITION AT THE ACTIVE SITE OF SUBTILISIN BPN': CRYSTALLOGRAPHIC STUDIES USING GENETICALLY ENGINEERED PROTEINACEOUS INHIBITOR SSI (STREPTOMYCES SUBTILISIN INHIBITOR)
Descriptor:SUBTILISIN BPN', STREPTOMYCES SUBTILISIN INHIBITOR (SSI), CALCIUM ION
Authors:Mitsui, Y., Takeuchi, Y., Nakamura, K.T.
Deposit date:1991-08-30
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular recognition at the active site of subtilisin BPN': crystallographic studies using genetically engineered proteinaceous inhibitor SSI (Streptomyces subtilisin inhibitor).
Protein Eng., 4, 1991
2TLD
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CRYSTAL STRUCTURE OF AN ENGINEERED SUBTILISIN INHIBITOR COMPLEXED WITH BOVINE TRYPSIN
Descriptor:TRYPSIN, STREPTOMYCES SUBTILISIN INHIBITOR (SSI)
Authors:Mitsui, Y., Takeuchi, Y., Nonaka, T., Nakamura, K.T.
Deposit date:1991-09-16
Release date:1992-07-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of an engineered subtilisin inhibitor complexed with bovine trypsin.
Proc.Natl.Acad.Sci.USA, 89, 1992
1IFA
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THREE-DIMENSIONAL CRYSTAL STRUCTURE OF RECOMBINANT MURINE INTERFERON-BETA
Descriptor:INTERFERON-BETA, ASPARAGINE
Authors:Mitsui, Y., Senda, T., Matsuda, S., Kawano, G., Nakamura, K.T., Shimizu, H.
Deposit date:1991-10-29
Release date:1994-01-31
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Three-dimensional crystal structure of recombinant murine interferon-beta.
EMBO J., 11, 1992
5SIC
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MOLECULAR RECOGNITION AT THE ACTIVE SITE OF SUBTILISIN BPN': CRYSTALLOGRAPHIC STUDIES USING GENETICALLY ENGINEERED PROTEINACEOUS INHIBITOR SSI (STREPTOMYCES SUBTILISIN INHIBITOR)
Descriptor:SUBTILISIN BPN', SUBTILISIN INHIBITOR (SSI), CALCIUM ION
Authors:Mitsui, Y., Takeuchi, Y., Nakamura, K.T.
Deposit date:1991-11-18
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular recognition at the active site of subtilisin BPN': crystallographic studies using genetically engineered proteinaceous inhibitor SSI (Streptomyces subtilisin inhibitor).
Protein Eng., 4, 1991
1RMS
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CRYSTAL STRUCTURES OF RIBONUCLEASE MS COMPLEXED WITH 3'-GUANYLIC ACID A GP*C ANALOGUE, 2'-DEOXY-2'-FLUOROGUANYLYL-3',5'-CYTIDINE
Descriptor:RIBONUCLEASE MS, GUANOSINE-3'-MONOPHOSPHATE
Authors:Nonaka, T., Mitsui, Y., Nakamura, K.T.
Deposit date:1991-12-02
Release date:1992-07-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of ribonuclease Ms (as a ribonuclease T1 homologue) complexed with a guanylyl-3',5'-cytidine analogue.
Biochemistry, 32, 1993
1RDS
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CRYSTAL STRUCTURE OF RIBONUCLEASE MS (AS RIBONUCLEASE T1 HOMOLOGUE) COMPLEXED WITH A GUANYLYL-3',5'-CYTIDINE ANALOGUE
Descriptor:RIBONUCLEASE MS, 2'-FLUOROGUANYLYL-(3'-5')-PHOSPHOCYTIDINE
Authors:Nonaka, T., Nakamura, K.T., Mitsui, Y.
Deposit date:1993-05-14
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of ribonuclease Ms (as a ribonuclease T1 homologue) complexed with a guanylyl-3',5'-cytidine analogue.
Biochemistry, 32, 1993
3SSI
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PROTEINASE INHIBITOR SSI (STREPTOMYCES SUBTILISIN, INHIBITOR) FROM STREPTOMYCES ALBOGRISEOLUS
Descriptor:STREPTOMYCES SUBTILISIN INHIBITOR
Authors:Suzuki, T., Nonaka, T., Mitsui, Y.
Deposit date:1996-03-01
Release date:1996-08-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Modulation of the Protein Proteinase Inhibitor Ssi (Streptomyces Subtilisin Inhibitor)
To be Published
1BOL
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THE CRYSTAL STRUCTURE OF RIBONUCLEASE RH FROM RHIZOPUS NIVEUS AT 2.0 A RESOLUTION
Descriptor:PROTEIN (RIBONUCLEASE RH)
Authors:Kurihara, H., Nakamura, K.T.
Deposit date:1998-08-05
Release date:1998-08-12
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of ribonuclease Rh from Rhizopus niveus at 2.0 A resolution.
J.Mol.Biol., 255, 1996
1QTR
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CRYSTAL STRUCTURE ANALYSIS OF THE PROLYL AMINOPEPTIDASE FROM SERRATIA MARCESCENS
Descriptor:PROLYL AMINOPEPTIDASE
Authors:Yoshimoto, T., Kabashima, T., Uchikawa, K., Inoue, T., Tanaka, N.
Deposit date:1999-06-28
Release date:1999-07-07
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal structure of prolyl aminopeptidase from Serratia marcescens.
J.Biochem.(Tokyo), 126, 1999
1DIX
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CRYSTAL STRUCTURE OF RNASE LE
Descriptor:EXTRACELLULAR RIBONUCLEASE LE
Authors:Tanaka, N., Nakamura, K.T.
Deposit date:1999-11-30
Release date:2000-09-06
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of a plant ribonuclease, RNase LE.
J.Mol.Biol., 298, 2000
1JIQ
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CRYSTAL STRUCTURE OF HUMAN AUTOCRINE MOTILITY FACTOR
Descriptor:autocrine motility factor
Authors:Tanaka, N., Haga, A., Uemura, H., Akiyama, H., Funasaka, T., Nagase, H., Raz, A., Nakamura, K.T.
Deposit date:2001-07-02
Release date:2002-06-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Inhibition mechanism of cytokine activity of human autocrine motility factor examined by crystal structure analyses and site-directed mutagenesis studies.
J.Mol.Biol., 318, 2002
1IRI
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CRYSTAL STRUCTURE OF HUMAN AUTOCRINE MOTILITY FACTOR COMPLEXED WITH AN INHIBITOR
Descriptor:autocrine motility factor, ERYTHOSE-4-PHOSPHATE
Authors:Tanaka, N., Haga, A., Uemura, H., Akiyama, H., Funasaka, T., Nagase, H., Raz, A., Nakamura, K.T.
Deposit date:2001-10-08
Release date:2002-06-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Inhibition mechanism of cytokine activity of human autocrine motility factor examined by crystal structure analyses and site-directed mutagenesis studies.
J.Mol.Biol., 318, 2002
1KOL
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CRYSTAL STRUCTURE OF FORMALDEHYDE DEHYDROGENASE
Descriptor:formaldehyde dehydrogenase, ZINC ION, SULFATE ION, ...
Authors:Tanaka, N., Kusakabe, Y., Ito, K., Yoshimoto, T., Nakamura, K.T.
Deposit date:2001-12-21
Release date:2002-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of Formaldehyde Dehydrogenase from Pseudomonas putida: the Structural Origin of the Tightly Bound Cofactor in Nicotinoprotein Dehydrogenases
J.mol.biol., 324, 2002
1J2T
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CREATININASE MN
Descriptor:creatinine amidohydrolase, ZINC ION, MANGANESE (II) ION, ...
Authors:Yoshimoto, T., Tanaka, N., Kanada, N., Inoue, T., Nakajima, Y., Haratake, M., Nakamura, K.T., Xu, Y., Ito, K.
Deposit date:2003-01-11
Release date:2004-01-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of creatininase reveal the substrate binding site and provide an insight into the catalytic mechanism
J.Mol.Biol., 337, 2004
1J2U
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CREATININASE ZN
Descriptor:creatinine amidohydrolase, ZINC ION, SULFATE ION
Authors:Yoshimoto, T., Tanaka, N., Kanada, N., Inoue, T., Nakajima, Y., Haratake, M., Nakamura, K.T., Xu, Y., Ito, K.
Deposit date:2003-01-11
Release date:2004-01-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of creatininase reveal the substrate binding site and provide an insight into the catalytic mechanism
J.Mol.Biol., 337, 2004
1V7Z
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CREATININASE-PRODUCT COMPLEX
Descriptor:creatinine amidohydrolase, MANGANESE (II) ION, ZINC ION, ...
Authors:Yoshimoto, T., Tanaka, N., Kanada, N., Inoue, T., Nakajima, Y., Haratake, M., Nakamura, K.T., Xu, Y., Ito, K.
Deposit date:2003-12-26
Release date:2004-01-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of creatininase reveal the substrate binding site and provide an insight into the catalytic mechanism
J.Mol.Biol., 337, 2004
1V8B
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CRYSTAL STRUCTURE OF A HYDROLASE
Descriptor:adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ADENOSINE
Authors:Tanaka, N., Nakanishi, M., Kusakabe, Y., Shiraiwa, K., Kitade, Y., Nakamura, K.T.
Deposit date:2004-01-03
Release date:2004-10-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of S-Adenosyl-l-Homocysteine Hydrolase from the Human Malaria Parasite Plasmodium falciparum
J.Mol.Biol., 343, 2004
1WDY
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CRYSTAL STRUCTURE OF RIBONUCLEASE
Descriptor:2-5A-dependent ribonuclease, 5'-O-MONOPHOSPHORYLADENYLYL(2'->5')ADENYLYL(2'->5')ADENOSINE
Authors:Tanaka, N., Nakanishi, M., Kusakabe, Y., Goto, Y., Kitade, Y., Nakamura, K.T.
Deposit date:2004-05-19
Release date:2004-10-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for recognition of 2',5'-linked oligoadenylates by human ribonuclease L
Embo J., 23, 2004
1WM1
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CRYSTAL STRUCTURE OF PROLYL AMINOPEPTIDASE, COMPLEX WITH PRO-TBODA
Descriptor:Proline iminopeptidase, (5-TERT-BUTYL-1,3,4-OXADIAZOL-2-YL)[(2R)-PYRROLIDIN-2-YL]METHANONE
Authors:Nakajima, Y., Inoue, T., Ito, K., Tozaka, T., Hatakeyama, S., Tanaka, N., Nakamura, K.T., Yoshimoto, T.
Deposit date:2004-07-01
Release date:2004-07-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Novel inhibitor for prolyl aminopeptidase from Serratia marcescens and studies on the mechanism of substrate recognition of the enzyme using the inhibitor
ARCH.BIOCHEM.BIOPHYS., 416, 2003
1WOJ
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CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE
Descriptor:2',3'-cyclic-nucleotide 3'-phosphodiesterase, PHOSPHATE ION
Authors:Sakamoto, Y., Tanaka, N., Ichimiya, T., Kurihara, T., Nakamura, K.T.
Deposit date:2004-08-19
Release date:2005-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the catalytic fragment of human brain 2',3'-cyclic-nucleotide 3'-phosphodiesterase
J.Mol.Biol., 346, 2005
1WRJ
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CRYSTAL STRUCTURE OF O6-METHYLGUANINE METHYLTRANSFERASE FROM SULFOLOBUS TOKODAII
Descriptor:Methylated-DNA--protein-cysteine methyltransferase
Authors:Kuroda, M., Tsunoda, M., Nakamura, K.T.
Deposit date:2004-10-18
Release date:2005-12-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of O6-methylguanine methyltransferase from Sulfolobus tokodaii
To be Published
1WTA
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CRYSTAL STRUCTURE OF 5'-DEOXY-5'-METHYLTHIOADENOSINE FROM AEROPYRUM PERNIX (R32 FORM)
Descriptor:5'-methylthioadenosine phosphorylase, PHOSPHATE ION, ADENINE
Authors:Tsunoda, M., Murakami, Y., Nakamura, K.T.
Deposit date:2004-11-18
Release date:2006-02-07
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal Structure of 5'-Deoxy-5'-methylthioadenosine from Aeropyrum pernix (R32 form)
To be Published
1WU3
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CRYSTAL STRUCTURE OF RECOMBINANT MURINE INTERFERON BETA
Descriptor:Interferon beta
Authors:Senda, T., Saitoh, S., Mitsui, Y.
Deposit date:2004-12-01
Release date:2004-12-14
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Refined crystal structure of recombinant murine interferon-beta at 2.15 A resolution
J.Mol.Biol., 253, 1995
2CVP
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CRYSTAL STRUCTURE OF MOUSE AMF
Descriptor:Glucose-6-phosphate isomerase, ACETATE ION, GLYCEROL
Authors:Tanaka, N., Haga, A., Naba, N., Shiraiwa, K., Kusakabe, Y., Hashimoto, K., Funasaka, T., Nagase, H., Raz, A., Nakamura, K.T.
Deposit date:2005-06-10
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors
J.Mol.Biol., 356, 2006
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