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1CO6
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CRYSTAL STRUCTURE OF FERROCYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor:PROTEIN (CYTOCHROME C2), PROTOPORPHYRIN IX CONTAINING FE
Authors:Miki, K., Sogabe, S.
Deposit date:1999-06-05
Release date:1999-06-18
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Refined crystal structure of ferrocytochrome c2 from Rhodopseudomonas viridis at 1.6 A resolution.
J.Mol.Biol., 252, 1995
1CRY
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APPLICATION OF AN AUTOMATIC MOLECULAR REPLACEMENT PROCEDURE TO CRYSTAL STRUCTURE OF CYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor:CYTOCHROME C2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Miki, K., Sogabe, S.
Deposit date:1993-12-27
Release date:1994-04-30
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Application of an automatic molecular-replacement procedure to crystal structure analysis of cytochrome c2 from Rhodopseudomonas viridis.
Acta Crystallogr.,Sect.D, 50, 1994
1DXR
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PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS - HIS L168 PHE MUTANT (TERBUTRYN COMPLEX)
Descriptor:PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT, PHOTOSYNTHETIC REACTION CENTER H SUBUNIT, PHOTOSYNTHETIC REACTION CENTER L SUBUNIT, ...
Authors:Lancaster, C.R.D., Bibikova, M., Sabatino, P., Oesterhelt, D., Michel, H.
Deposit date:2000-01-15
Release date:2001-01-12
Last modified:2018-11-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of the drastically increased initial electron transfer rate in the reaction center from a Rhodopseudomonas viridis mutant described at 2.00-A resolution.
J. Biol. Chem., 275, 2000
1EYS
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CRYSTAL STRUCTURE OF PHOTOSYNTHETIC REACTION CENTER FROM A THERMOPHILIC BACTERIUM, THERMOCHROMATIUM TEPIDUM
Descriptor:PHOTOSYNTHETIC REACTION CENTER, PROTOPORPHYRIN IX CONTAINING FE, B-2-OCTYLGLUCOSIDE, ...
Authors:Nogi, T., Fathir, I., Kobayashi, M., Nozawa, T., Miki, K.
Deposit date:2000-05-08
Release date:2000-12-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of photosynthetic reaction center and high-potential iron-sulfur protein from Thermochromatium tepidum: thermostability and electron transfer.
Proc.Natl.Acad.Sci.USA, 97, 2000
1EYT
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CRYSTAL STRUCTURE OF HIGH-POTENTIAL IRON-SULFUR PROTEIN FROM THERMOCHROMATIUM TEPIDUM
Descriptor:HIGH-POTENTIAL IRON-SULFUR PROTEIN, IRON/SULFUR CLUSTER
Authors:Nogi, T., Fathir, I., Kobayashi, M., Nozawa, T., Miki, K.
Deposit date:2000-05-08
Release date:2000-12-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of photosynthetic reaction center and high-potential iron-sulfur protein from Thermochromatium tepidum: thermostability and electron transfer.
Proc.Natl.Acad.Sci.USA, 97, 2000
1F75
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CRYSTAL STRUCTURE OF UNDECAPRENYL DIPHOSPHATE SYNTHASE FROM MICROCOCCUS LUTEUS B-P 26
Descriptor:UNDECAPRENYL PYROPHOSPHATE SYNTHETASE, SULFATE ION
Authors:Fujihashi, M., Zhang, Y.-W., Higuchi, Y., Li, X.-Y., Koyama, T., Miki, K.
Deposit date:2000-06-26
Release date:2001-03-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of cis-prenyl chain elongating enzyme, undecaprenyl diphosphate synthase.
Proc.Natl.Acad.Sci.USA, 98, 2001
1FJ0
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STRUCTURE DETERMINATION OF THE FERRICYTOCHROME C2 FROM RHODOPSEUDOMONAS PALUSTRIS
Descriptor:CYTOCHROME C2, SULFATE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Geremia, S.
Deposit date:2000-08-07
Release date:2002-01-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Cleavage of the iron-methionine bond in c-type cytochromes: Crystal structure of oxidized and reduced cytochrome c(2) from Rhodopseudomonas palustris and its ammonia complex.
Protein Sci., 11, 2002
1FVP
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FLAVOPROTEIN 390
Descriptor:FLAVOPROTEIN 390, 6-(3-TETRADECANOIC ACID) FLAVINE MONONUCLEOTIDE
Authors:Kita, A., Miki, K.
Deposit date:1995-07-07
Release date:1995-10-15
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of flavoprotein FP390 from a luminescent bacterium Photobacterium phosphoreum refined at 2.7 A resolution.
Acta Crystallogr.,Sect.D, 52, 1996
1GEH
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CRYSTAL STRUCTURE OF ARCHAEAL RUBISCO (RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE)
Descriptor:RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE, SULFATE ION
Authors:Kitano, K., Maeda, N., Fukui, T., Atomi, H., Imanaka, T., Miki, K.
Deposit date:2000-11-13
Release date:2001-12-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of a Novel-Type Archaeal Rubisco with Pentagonal Symmetry
Structure, 9, 2001
1H2R
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THREE-DIMENSIONAL STRUCTURE OF NI-FE HYDROGENASE FROM DESULFIVIBRIO VULGARIS MIYAZAKI F IN THE REDUCED FORM AT 1.4 A RESOLUTION
Descriptor:PROTEIN (PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT), PROTEIN (PERIPLASMIC [NIFE] HYDROGENASE LARGE SUBUNIT), IRON/SULFUR CLUSTER, ...
Authors:Higuchi, Y., Ogata, H.
Deposit date:1999-06-14
Release date:2000-01-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Removal of the bridging ligand atom at the Ni-Fe active site of [NiFe] hydrogenase upon reduction with H2, as revealed by X-ray structure analysis at 1.4 A resolution.
Structure Fold.Des., 7, 1999
1HH7
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REFINED CRYSTAL STRUCTURE OF CYTOCHROME C2 FROM RHODOPSEUDOMONAS PALUSTRIS AT 1.4 ANGSTROM RESOLUTION
Descriptor:CYTOCHROME C2, HEME C, SULFATE ION, ...
Authors:Garau, G., Geremia, S.
Deposit date:2000-12-21
Release date:2001-01-02
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystallization and Preliminary X-Ray Analysis of Two Ph-Dependent Forms of Cytochrome C2 from Rhodopseudomonas Palustris
Acta Crystallogr.,Sect.D, 56, 2000
1HNL
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CRYSTAL STRUCTURE OF A GLUTATHIONYLATED HUMAN LYSOZYME: A FOLDING INTERMEDIATE MIMIC IN THE FORMATION OF A DISULFIDE BOND
Descriptor:HUMAN LYSOZYME, GLUTATHIONE
Authors:Inaka, K., Matsushima, M., Miki, K.
Deposit date:1994-12-22
Release date:1995-02-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a glutathionylated human lysozyme: a folding intermediate mimic in the formation of a disulfide bond.
Acta Crystallogr.,Sect.D, 51, 1995
1IO3
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CRYSTAL STRUCTURE OF FERRICYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor:CYTOCHROME C2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Miki, K., Sogabe, S.
Deposit date:2001-01-06
Release date:2001-04-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the oxidized cytochrome c(2) from Blastochloris viridis.
FEBS Lett., 491, 2001
1IOK
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CRYSTAL STRUCTURE OF CHAPERONIN-60 FROM PARACOCCUS DENITRIFICANS
Descriptor:CHAPERONIN 60
Authors:Fukami, T.A., Yohda, M., Taguchi, H., Yoshida, M., Miki, K.
Deposit date:2001-03-16
Release date:2001-10-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of chaperonin-60 from Paracoccus denitrificans.
J.Mol.Biol., 312, 2001
1IQ6
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(R)-HYDRATASE FROM A. CAVIAE INVOLVED IN PHA BIOSYNTHESIS
Descriptor:(R)-SPECIFIC ENOYL-COA HYDRATASE, ISOPROPYL ALCOHOL
Authors:Hisano, T., Tsuge, T., Fukui, T., Iwata, T., Doi, Y.
Deposit date:2001-06-18
Release date:2003-02-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of the (R)-specific enoyl-CoA hydratase from Aeromonas caviae involved in polyhydroxyalkanoate biosynthesis
J.Biol.Chem., 278, 2003
1IQR
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CRYSTAL STRUCTURE OF DNA PHOTOLYASE FROM THERMUS THERMOPHILUS
Descriptor:photolyase, PHOSPHATE ION, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Komori, H., Masui, R., Kuramitsu, S., Yokoyama, S., Shibata, T., Inoue, Y., Miki, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-07-27
Release date:2001-11-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
1IQU
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CRYSTAL STRUCTURE OF PHOTOLYASE-THYMINE COMPLEX
Descriptor:photolyase, PHOSPHATE ION, THYMINE, ...
Authors:Komori, H., Masui, R., Kuramitsu, S., Yokoyama, S., Shibata, T., Inoue, Y., Miki, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-08-03
Release date:2002-05-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
1IT6
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CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN CALYCULIN A AND THE CATALYTIC SUBUNIT OF PROTEIN PHOSPHATASE 1
Descriptor:SERINE/THREONINE PROTEIN PHOSPHATASE 1 GAMMA (PP1-GAMMA) CATALYTIC SUBUNIT, MANGANESE (II) ION, CALYCULIN A
Authors:Kita, A., Matsunaga, S., Takai, A., Kataiwa, H., Wakimoto, T., Fusetani, N., Isobe, M., Miki, K.
Deposit date:2002-01-09
Release date:2002-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the complex between calyculin A and the catalytic subunit of protein phosphatase 1.
Structure, 10, 2002
1IU9
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CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF ASPARTATE RACEMASE FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:aspartate racemase, CALCIUM ION
Authors:Liu, L., Iwata, K., Yohda, M., Miki, K.
Deposit date:2002-02-28
Release date:2003-09-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural insight into gene duplication, gene fusion and domain swapping in the evolution of PLP-independent amino acid racemases
FEBS LETT., 528, 2002
1IUA
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ULTRA-HIGH RESOLUTION STRUCTURE OF HIPIP FROM THERMOCHROMATIUM TEPIDUM
Descriptor:High-potential iron-sulfur protein, SULFATE ION, IRON/SULFUR CLUSTER
Authors:Liu, L., Nogi, T., Kobayashi, M., Nozawa, T., Miki, K.
Deposit date:2002-03-01
Release date:2002-03-20
Last modified:2019-01-23
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Ultrahigh-resolution structure of high-potential iron-sulfur protein from Thermochromatium tepidum.
Acta Crystallogr.,Sect.D, 58, 2002
1IUB
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FUCOSE-SPECIFIC LECTIN FROM ALEURIA AURANTIA (HG-DERIVATIVE FORM)
Descriptor:Fucose-specific lectin, BETA-L-FUCOSE, SULFATE ION, ...
Authors:Fujihashi, M., Peapus, D.H., Kamiya, N., Nagata, Y., Miki, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-03-01
Release date:2003-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal Structure of Fucose-Specific Lectin from Aleuria aurantia Binding Ligands at Three of Its Five Sugar Recognition Sites
Biochemistry, 42, 2003
1IUC
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FUCOSE-SPECIFIC LECTIN FROM ALEURIA AURANTIA WITH THREE LIGANDS
Descriptor:Fucose-specific lectin, BETA-L-FUCOSE, ALPHA-L-FUCOSE, ...
Authors:Fujihashi, M., Peapus, D.H., Kamiya, N., Nagata, Y., Miki, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-03-01
Release date:2003-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal Structure of Fucose-Specific Lectin from Aleuria aurantia Binding Ligands at Three of Its Five Sugar Recognition Sites
Biochemistry, 42, 2003
1IWL
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CRYSTAL STRUCTURE OF THE LIPOPROTEIN LOCALIZATION FACTOR, LOLA
Descriptor:Outer-membrane lipoproteins carrier protein, ZINC ION, MAGNESIUM ION
Authors:Takeda, K., Miyatake, H., Yokota, N., Matsuyama, S., Tokuda, H., Miki, K.
Deposit date:2002-05-17
Release date:2003-07-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of bacterial lipoprotein localization factors, LolA and LolB
Embo J., 22, 2003
1IWM
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CRYSTAL STRUCTURE OF THE OUTER MEMBRANE LIPOPROTEIN RECEPTOR, LOLB
Descriptor:Outer Membrane Lipoprotein LolB, SULFATE ION
Authors:Takeda, K., Miyatake, H., Yokota, N., Matsuyama, S., Tokuda, H., Miki, K.
Deposit date:2002-05-17
Release date:2003-07-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of bacterial lipoprotein localization factors, LolA and LolB.
Embo J., 22, 2003
1IWN
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CRYSTAL STRUCTURE OF THE OUTER MEMBRANE LIPOPROTEIN RECEPTOR LOLB COMPLEXED WITH PEGMME2000
Descriptor:Outer Membrane Lipoprotein LolB, SULFATE ION, 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
Authors:Takeda, K., Miyatake, H., Yokota, N., Matsuyama, S., Tokuda, H., Miki, K.
Deposit date:2002-05-17
Release date:2003-07-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of bacterial lipoprotein localization factors, LolA and LolB.
Embo J., 22, 2003