Author results

1PRC
  • Download 1prc
  • View 1prc
Molmil generated image of 1prc
CRYSTALLOGRAPHIC REFINEMENT AT 2.3 ANGSTROMS RESOLUTION AND REFINED MODEL OF THE PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor:PHOTOSYNTHETIC REACTION CENTER, PROTOPORPHYRIN IX CONTAINING FE, BACTERIOCHLOROPHYLL B, ...
Authors:Deisenhofer, J., Epp, O., Miki, K., Huber, R., Michel, H.
Deposit date:1988-02-04
Release date:1989-01-09
Last modified:2014-08-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic refinement at 2.3 A resolution and refined model of the photosynthetic reaction centre from Rhodopseudomonas viridis.
J.Mol.Biol., 246, 1995
1CRY
  • Download 1cry
  • View 1cry
Molmil generated image of 1cry
APPLICATION OF AN AUTOMATIC MOLECULAR REPLACEMENT PROCEDURE TO CRYSTAL STRUCTURE OF CYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor:CYTOCHROME C2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Miki, K., Sogabe, S.
Deposit date:1993-12-27
Release date:1994-04-30
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Application of an automatic molecular-replacement procedure to crystal structure analysis of cytochrome c2 from Rhodopseudomonas viridis.
Acta Crystallogr.,Sect.D, 50, 1994
1HNL
  • Download 1hnl
  • View 1hnl
Molmil generated image of 1hnl
CRYSTAL STRUCTURE OF A GLUTATHIONYLATED HUMAN LYSOZYME: A FOLDING INTERMEDIATE MIMIC IN THE FORMATION OF A DISULFIDE BOND
Descriptor:HUMAN LYSOZYME, GLUTATHIONE
Authors:Inaka, K., Matsushima, M., Miki, K.
Deposit date:1994-12-22
Release date:1995-02-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a glutathionylated human lysozyme: a folding intermediate mimic in the formation of a disulfide bond.
Acta Crystallogr.,Sect.D, 51, 1995
1NDH
  • Download 1ndh
  • View 1ndh
Molmil generated image of 1ndh
CRYSTAL STRUCTURE OF NADH-CYTOCHROME B5 REDUCTASE FROM PIG LIVER AT 2.4 ANGSTROMS RESOLUTION
Descriptor:CYTOCHROME B5 REDUCTASE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Nishida, H., Miki, K.
Deposit date:1994-10-31
Release date:1995-02-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of NADH-cytochrome b5 reductase from pig liver at 2.4 A resolution.
Biochemistry, 34, 1995
1FVP
  • Download 1fvp
  • View 1fvp
Molmil generated image of 1fvp
FLAVOPROTEIN 390
Descriptor:FLAVOPROTEIN 390, 6-(3-TETRADECANOIC ACID) FLAVINE MONONUCLEOTIDE
Authors:Kita, A., Miki, K.
Deposit date:1995-07-07
Release date:1995-10-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of flavoprotein FP390 from a luminescent bacterium Photobacterium phosphoreum refined at 2.7 A resolution.
Acta Crystallogr.,Sect.D, 52, 1996
207L
  • Download 207l
  • View 207l
Molmil generated image of 207l
MUTANT HUMAN LYSOZYME C77A
Descriptor:LYSOZYME, N-ACETYL-L-CYSTEINE
Authors:Matsushima, M., Song, H.
Deposit date:1996-03-26
Release date:1996-10-14
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A role of PDI in the reductive cleavage of mixed disulfides.
J.Biochem.(Tokyo), 120, 1996
208L
  • Download 208l
  • View 208l
Molmil generated image of 208l
MUTANT HUMAN LYSOZYME C77A
Descriptor:LYSOZYME, CYSTEINE
Authors:Matsushima, M., Song, H.
Deposit date:1996-03-26
Release date:1996-10-14
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A role of PDI in the reductive cleavage of mixed disulfides.
J.Biochem.(Tokyo), 120, 1996
1QNF
  • Download 1qnf
  • View 1qnf
Molmil generated image of 1qnf
STRUCTURE OF PHOTOLYASE
Descriptor:PHOTOLYASE, FLAVIN-ADENINE DINUCLEOTIDE, 8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE
Authors:Miki, K., Kitadokoro, K.
Deposit date:1997-07-04
Release date:1998-01-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of DNA photolyase from Anacystis nidulans
Nat.Struct.Biol., 4, 1997
2PRC
  • Download 2prc
  • View 2prc
Molmil generated image of 2prc
PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS (UBIQUINONE-2 COMPLEX)
Descriptor:PHOTOSYNTHETIC REACTION CENTER, PROTOPORPHYRIN IX CONTAINING FE, BACTERIOCHLOROPHYLL B, ...
Authors:Lancaster, C.R.D., Michel, H.
Deposit date:1997-07-29
Release date:1998-11-11
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The coupling of light-induced electron transfer and proton uptake as derived from crystal structures of reaction centres from Rhodopseudomonas viridis modified at the binding site of the secondary quinone, QB.
Structure, 5, 1997
3PRC
  • Download 3prc
  • View 3prc
Molmil generated image of 3prc
PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS (QB-DEPLETED)
Descriptor:PHOTOSYNTHETIC REACTION CENTER, PROTOPORPHYRIN IX CONTAINING FE, BACTERIOCHLOROPHYLL B, ...
Authors:Lancaster, C.R.D., Michel, H.
Deposit date:1997-07-29
Release date:1998-11-11
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The coupling of light-induced electron transfer and proton uptake as derived from crystal structures of reaction centres from Rhodopseudomonas viridis modified at the binding site of the secondary quinone, QB.
Structure, 5, 1997
5PRC
  • Download 5prc
  • View 5prc
Molmil generated image of 5prc
PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS (ATRAZINE COMPLEX)
Descriptor:PHOTOSYNTHETIC REACTION CENTER, PROTOPORPHYRIN IX CONTAINING FE, BACTERIOCHLOROPHYLL B, ...
Authors:Lancaster, C.R.D., Michel, H.
Deposit date:1997-08-01
Release date:1999-04-06
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Refined crystal structures of reaction centres from Rhodopseudomonas viridis in complexes with the herbicide atrazine and two chiral atrazine derivatives also lead to a new model of the bound carotenoid.
J.Mol.Biol., 286, 1999
6PRC
  • Download 6prc
  • View 6prc
Molmil generated image of 6prc
PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS (DG-420314 (TRIAZINE) COMPLEX)
Descriptor:PHOTOSYNTHETIC REACTION CENTER, PROTOPORPHYRIN IX CONTAINING FE, BACTERIOCHLOROPHYLL B, ...
Authors:Lancaster, C.R.D., Michel, H.
Deposit date:1997-07-31
Release date:1999-04-06
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Refined crystal structures of reaction centres from Rhodopseudomonas viridis in complexes with the herbicide atrazine and two chiral atrazine derivatives also lead to a new model of the bound carotenoid.
J.Mol.Biol., 286, 1999
7PRC
  • Download 7prc
  • View 7prc
Molmil generated image of 7prc
PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS (DG-420315 (TRIAZINE) COMPLEX)
Descriptor:PHOTOSYNTHETIC REACTION CENTER, PROTOPORPHYRIN IX CONTAINING FE, BACTERIOCHLOROPHYLL B, ...
Authors:Lancaster, C.R.D., Michel, H.
Deposit date:1997-08-01
Release date:1999-04-06
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Refined crystal structures of reaction centres from Rhodopseudomonas viridis in complexes with the herbicide atrazine and two chiral atrazine derivatives also lead to a new model of the bound carotenoid.
J.Mol.Biol., 286, 1999
1MPY
  • Download 1mpy
  • View 1mpy
Molmil generated image of 1mpy
STRUCTURE OF CATECHOL 2,3-DIOXYGENASE (METAPYROCATECHASE) FROM PSEUDOMONAS PUTIDA MT-2
Descriptor:CATECHOL 2,3-DIOXYGENASE, FE (II) ION, ACETONE
Authors:Kita, A., Kita, S., Fujisawa, I., Inaka, K., Ishida, T., Horiike, K., Nozaki, M., Miki, K.
Deposit date:1998-10-20
Release date:1999-05-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:An archetypical extradiol-cleaving catecholic dioxygenase: the crystal structure of catechol 2,3-dioxygenase (metapyrocatechase) from Ppseudomonas putida mt-2.
Structure Fold.Des., 7, 1999
1CO6
  • Download 1co6
  • View 1co6
Molmil generated image of 1co6
CRYSTAL STRUCTURE OF FERROCYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor:PROTEIN (CYTOCHROME C2), PROTOPORPHYRIN IX CONTAINING FE
Authors:Miki, K., Sogabe, S.
Deposit date:1999-06-05
Release date:1999-06-18
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Refined crystal structure of ferrocytochrome c2 from Rhodopseudomonas viridis at 1.6 A resolution.
J.Mol.Biol., 252, 1995
1QGI
  • Download 1qgi
  • View 1qgi
Molmil generated image of 1qgi
CHITOSANASE FROM BACILLUS CIRCULANS
Descriptor:PROTEIN (CHITOSANASE), D-GLUCOSAMINE, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Saito, J., Kita, A., Higuchi, Y., Nagata, Y., Ando, A., Miki, K.
Deposit date:1999-04-28
Release date:1999-10-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of chitosanase from Bacillus circulans MH-K1 at 1.6-A resolution and its substrate recognition mechanism.
J.Biol.Chem., 274, 1999
1H2R
  • Download 1h2r
  • View 1h2r
Molmil generated image of 1h2r
THREE-DIMENSIONAL STRUCTURE OF NI-FE HYDROGENASE FROM DESULFIVIBRIO VULGARIS MIYAZAKI F IN THE REDUCED FORM AT 1.4 A RESOLUTION
Descriptor:PROTEIN (PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT), PROTEIN (PERIPLASMIC [NIFE] HYDROGENASE LARGE SUBUNIT), IRON/SULFUR CLUSTER, ...
Authors:Higuchi, Y., Ogata, H.
Deposit date:1999-06-14
Release date:2000-01-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Removal of the bridging ligand atom at the Ni-Fe active site of [NiFe] hydrogenase upon reduction with H2, as revealed by X-ray structure analysis at 1.4 A resolution.
Structure Fold.Des., 7, 1999
1REP
  • Download 1rep
  • View 1rep
Molmil generated image of 1rep
CRYSTAL STRUCTURE OF REPLICATION INITIATOR PROTEIN REPE54 OF MINI-F PLASMID COMPLEXED WITH AN ITERON DNA
Descriptor:DNA (5'-D(*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*T)-3'), DNA (5'-D(*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*GP*T)-3'), PROTEIN (REPLICATION INITIATION PROTEIN), ...
Authors:Komori, H., Matsunaga, F., Higuchi, Y., Ishiai, M., Wada, C., Miki, K.
Deposit date:1999-04-29
Release date:2000-02-09
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a prokaryotic replication initiator protein bound to DNA at 2.6 A resolution.
EMBO J., 18, 1999
1EYS
  • Download 1eys
  • View 1eys
Molmil generated image of 1eys
CRYSTAL STRUCTURE OF PHOTOSYNTHETIC REACTION CENTER FROM A THERMOPHILIC BACTERIUM, THERMOCHROMATIUM TEPIDUM
Descriptor:PHOTOSYNTHETIC REACTION CENTER, PROTOPORPHYRIN IX CONTAINING FE, B-2-OCTYLGLUCOSIDE, ...
Authors:Nogi, T., Fathir, I., Kobayashi, M., Nozawa, T., Miki, K.
Deposit date:2000-05-08
Release date:2000-12-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of photosynthetic reaction center and high-potential iron-sulfur protein from Thermochromatium tepidum: thermostability and electron transfer.
Proc.Natl.Acad.Sci.USA, 97, 2000
1EYT
  • Download 1eyt
  • View 1eyt
Molmil generated image of 1eyt
CRYSTAL STRUCTURE OF HIGH-POTENTIAL IRON-SULFUR PROTEIN FROM THERMOCHROMATIUM TEPIDUM
Descriptor:HIGH-POTENTIAL IRON-SULFUR PROTEIN, IRON/SULFUR CLUSTER
Authors:Nogi, T., Fathir, I., Kobayashi, M., Nozawa, T., Miki, K.
Deposit date:2000-05-08
Release date:2000-12-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of photosynthetic reaction center and high-potential iron-sulfur protein from Thermochromatium tepidum: thermostability and electron transfer.
Proc.Natl.Acad.Sci.USA, 97, 2000
1HH7
  • Download 1hh7
  • View 1hh7
Molmil generated image of 1hh7
REFINED CRYSTAL STRUCTURE OF CYTOCHROME C2 FROM RHODOPSEUDOMONAS PALUSTRIS AT 1.4 ANGSTROM RESOLUTION
Descriptor:CYTOCHROME C2, HEME C, SULFATE ION, ...
Authors:Garau, G., Geremia, S.
Deposit date:2000-12-21
Release date:2001-01-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystallization and Preliminary X-Ray Analysis of Two Ph-Dependent Forms of Cytochrome C2 from Rhodopseudomonas Palustris
Acta Crystallogr.,Sect.D, 56, 2000
1DXR
  • Download 1dxr
  • View 1dxr
Molmil generated image of 1dxr
PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS - HIS L168 PHE MUTANT (TERBUTRYN COMPLEX)
Descriptor:PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT, PHOTOSYNTHETIC REACTION CENTER H SUBUNIT, PHOTOSYNTHETIC REACTION CENTER L SUBUNIT, ...
Authors:Lancaster, C.R.D., Bibikova, M., Sabatino, P., Oesterhelt, D., Michel, H.
Deposit date:2000-01-15
Release date:2001-01-12
Last modified:2018-11-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of the drastically increased initial electron transfer rate in the reaction center from a Rhodopseudomonas viridis mutant described at 2.00-A resolution.
J. Biol. Chem., 275, 2000
1F75
  • Download 1f75
  • View 1f75
Molmil generated image of 1f75
CRYSTAL STRUCTURE OF UNDECAPRENYL DIPHOSPHATE SYNTHASE FROM MICROCOCCUS LUTEUS B-P 26
Descriptor:UNDECAPRENYL PYROPHOSPHATE SYNTHETASE, SULFATE ION
Authors:Fujihashi, M., Zhang, Y.-W., Higuchi, Y., Li, X.-Y., Koyama, T., Miki, K.
Deposit date:2000-06-26
Release date:2001-03-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of cis-prenyl chain elongating enzyme, undecaprenyl diphosphate synthase.
Proc.Natl.Acad.Sci.USA, 98, 2001
1IO3
  • Download 1io3
  • View 1io3
Molmil generated image of 1io3
CRYSTAL STRUCTURE OF FERRICYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor:CYTOCHROME C2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Miki, K., Sogabe, S.
Deposit date:2001-01-06
Release date:2001-04-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the oxidized cytochrome c(2) from Blastochloris viridis.
FEBS Lett., 491, 2001
1QSW
  • Download 1qsw
  • View 1qsw
Molmil generated image of 1qsw
CRYSTAL STRUCTURE ANALYSIS OF A HUMAN LYSOZYME MUTANT W64C C65A
Descriptor:HUMAN LYSOZYME MUTANT
Authors:Inaka, K., Kanaya, E., Kikuchi, M., Miki, K.
Deposit date:1999-06-24
Release date:2001-08-08
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a mutant human lysozyme with a substituted disulfide bond.
Proteins, 43, 2001