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1CRY
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APPLICATION OF AN AUTOMATIC MOLECULAR REPLACEMENT PROCEDURE TO CRYSTAL STRUCTURE OF CYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor:CYTOCHROME C2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Miki, K., Sogabe, S.
Deposit date:1993-12-27
Release date:1994-04-30
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Application of an automatic molecular-replacement procedure to crystal structure analysis of cytochrome c2 from Rhodopseudomonas viridis.
Acta Crystallogr.,Sect.D, 50, 1994
1CO6
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CRYSTAL STRUCTURE OF FERROCYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor:PROTEIN (CYTOCHROME C2), PROTOPORPHYRIN IX CONTAINING FE
Authors:Miki, K., Sogabe, S.
Deposit date:1999-06-05
Release date:1999-06-18
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Refined crystal structure of ferrocytochrome c2 from Rhodopseudomonas viridis at 1.6 A resolution.
J.Mol.Biol., 252, 1995
1QNF
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STRUCTURE OF PHOTOLYASE
Descriptor:PHOTOLYASE, FLAVIN-ADENINE DINUCLEOTIDE, 8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE
Authors:Miki, K., Kitadokoro, K.
Deposit date:1997-07-04
Release date:1998-01-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of DNA photolyase from Anacystis nidulans
Nat.Struct.Biol., 4, 1997
1IO3
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CRYSTAL STRUCTURE OF FERRICYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor:CYTOCHROME C2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Miki, K., Sogabe, S.
Deposit date:2001-01-06
Release date:2001-04-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the oxidized cytochrome c(2) from Blastochloris viridis.
FEBS Lett., 491, 2001
2YQC
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CRYSTAL STRUCTURE OF URIDINE-DIPHOSPHO-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE FROM CANDIDA ALBICANS, IN THE APO-LIKE FORM
Descriptor:UDP-N-acetylglucosamine pyrophosphorylase, MAGNESIUM ION, GLYCEROL
Authors:Miki, K., Maruyama, D., Nishitani, Y., Nonaka, T., Kita, A.
Deposit date:2007-03-30
Release date:2007-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Uridine-diphospho-N-acetylglucosamine Pyrophosphorylase from Candida albicans and Catalytic Reaction Mechanism
J.Biol.Chem., 282, 2007
2YQH
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CRYSTAL STRUCTURE OF URIDINE-DIPHOSPHO-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE FROM CANDIDA ALBICANS, IN THE SUBSTRATE-BINDING FORM
Descriptor:UDP-N-acetylglucosamine pyrophosphorylase, 2-(ACETYLAMINO)-2-DEOXY-1-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE, SULFATE ION, ...
Authors:Miki, K., Maruyama, D., Nishitani, Y., Nonaka, T., Kita, A.
Deposit date:2007-03-30
Release date:2007-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Uridine-diphospho-N-acetylglucosamine Pyrophosphorylase from Candida albicans and Catalytic Reaction Mechanism
J.Biol.Chem., 282, 2007
2YQJ
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CRYSTAL STRUCTURE OF URIDINE-DIPHOSPHO-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE FROM CANDIDA ALBICANS, IN THE REACTION-COMPLETED FORM
Descriptor:UDP-N-acetylglucosamine pyrophosphorylase, SULFATE ION, MAGNESIUM ION, ...
Authors:Miki, K., Maruyama, D., Nishitani, Y., Nonaka, T., Kita, A.
Deposit date:2007-03-30
Release date:2007-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal Structure of Uridine-diphospho-N-acetylglucosamine Pyrophosphorylase from Candida albicans and Catalytic Reaction Mechanism
J.Biol.Chem., 282, 2007
2YQS
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CRYSTAL STRUCTURE OF URIDINE-DIPHOSPHO-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE FROM CANDIDA ALBICANS, IN THE PRODUCT-BINDING FORM
Descriptor:UDP-N-acetylglucosamine pyrophosphorylase, SULFATE ION, MAGNESIUM ION, ...
Authors:Miki, K., Maruyama, D., Nishitani, Y., Nonaka, T., Kita, A.
Deposit date:2007-03-30
Release date:2007-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Uridine-diphospho-N-acetylglucosamine Pyrophosphorylase from Candida albicans and Catalytic Reaction Mechanism
J.Biol.Chem., 282, 2007
2D05
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CHITOSANASE FROM BACILLUS CIRCULANS MUTANT K218P
Descriptor:Chitosanase, SULFATE ION
Authors:Fukamizo, T., Amano, S., Yamaguchi, K., Yoshikawa, T., Katsumi, T., Saito, J., Suzuki, M., Miki, K., Nagata, Y., Ando, A.
Deposit date:2005-07-25
Release date:2005-12-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bacillus circulans MH-K1 Chitosanase: Amino Acid Residues Responsible for Substrate Binding
J.Biochem.(Tokyo), 138, 2005
1IUA
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ULTRA-HIGH RESOLUTION STRUCTURE OF HIPIP FROM THERMOCHROMATIUM TEPIDUM
Descriptor:High-potential iron-sulfur protein, SULFATE ION, IRON/SULFUR CLUSTER
Authors:Liu, L., Nogi, T., Kobayashi, M., Nozawa, T., Miki, K.
Deposit date:2002-03-01
Release date:2002-03-20
Last modified:2019-01-23
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Ultrahigh-resolution structure of high-potential iron-sulfur protein from Thermochromatium tepidum.
Acta Crystallogr.,Sect.D, 58, 2002
1MPY
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STRUCTURE OF CATECHOL 2,3-DIOXYGENASE (METAPYROCATECHASE) FROM PSEUDOMONAS PUTIDA MT-2
Descriptor:CATECHOL 2,3-DIOXYGENASE, FE (II) ION, ACETONE
Authors:Kita, A., Kita, S., Fujisawa, I., Inaka, K., Ishida, T., Horiike, K., Nozaki, M., Miki, K.
Deposit date:1998-10-20
Release date:1999-05-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:An archetypical extradiol-cleaving catecholic dioxygenase: the crystal structure of catechol 2,3-dioxygenase (metapyrocatechase) from Ppseudomonas putida mt-2.
Structure Fold.Des., 7, 1999
1WMD
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CRYSTAL STRUCTURE OF ALKALINE SERINE PROTEASE KP-43 FROM BACILLUS SP. KSM-KP43 (1.30 ANGSTROM, 100 K)
Descriptor:protease, CALCIUM ION, SULFATE ION, ...
Authors:Nonaka, T., Fujihashi, M., Kita, A., Saeki, K., Ito, S., Horikoshi, K., Miki, K.
Deposit date:2004-07-08
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The Crystal Structure of an Oxidatively Stable Subtilisin-like Alkaline Serine Protease, KP-43, with a C-terminal {beta}-Barrel Domain
J.Biol.Chem., 279, 2004
1WME
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CRYSTAL STRUCTURE OF ALKALINE SERINE PROTEASE KP-43 FROM BACILLUS SP. KSM-KP43 (1.50 ANGSTROM, 293 K)
Descriptor:protease, CALCIUM ION
Authors:Nonaka, T., Fujihashi, M., Kita, A., Saeki, K., Ito, S., Horikoshi, K., Miki, K.
Deposit date:2004-07-08
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Crystal Structure of an Oxidatively Stable Subtilisin-like Alkaline Serine Protease, KP-43, with a C-terminal {beta}-Barrel Domain
J.Biol.Chem., 279, 2004
1WMF
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CRYSTAL STRUCTURE OF ALKALINE SERINE PROTEASE KP-43 FROM BACILLUS SP. KSM-KP43 (OXIDIZED FORM, 1.73 ANGSTROM)
Descriptor:protease, CALCIUM ION, 1,4-DIETHYLENE DIOXIDE, ...
Authors:Nonaka, T., Fujihashi, M., Kita, A., Saeki, K., Ito, S., Horikoshi, K., Miki, K.
Deposit date:2004-07-08
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The Crystal Structure of an Oxidatively Stable Subtilisin-like Alkaline Serine Protease, KP-43, with a C-terminal {beta}-Barrel Domain
J.Biol.Chem., 279, 2004
1GEH
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CRYSTAL STRUCTURE OF ARCHAEAL RUBISCO (RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE)
Descriptor:RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE, SULFATE ION
Authors:Kitano, K., Maeda, N., Fukui, T., Atomi, H., Imanaka, T., Miki, K.
Deposit date:2000-11-13
Release date:2001-12-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of a Novel-Type Archaeal Rubisco with Pentagonal Symmetry
Structure, 9, 2001
1HNL
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CRYSTAL STRUCTURE OF A GLUTATHIONYLATED HUMAN LYSOZYME: A FOLDING INTERMEDIATE MIMIC IN THE FORMATION OF A DISULFIDE BOND
Descriptor:HUMAN LYSOZYME, GLUTATHIONE
Authors:Inaka, K., Matsushima, M., Miki, K.
Deposit date:1994-12-22
Release date:1995-02-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a glutathionylated human lysozyme: a folding intermediate mimic in the formation of a disulfide bond.
Acta Crystallogr.,Sect.D, 51, 1995
1NDH
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CRYSTAL STRUCTURE OF NADH-CYTOCHROME B5 REDUCTASE FROM PIG LIVER AT 2.4 ANGSTROMS RESOLUTION
Descriptor:CYTOCHROME B5 REDUCTASE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Nishida, H., Miki, K.
Deposit date:1994-10-31
Release date:1995-02-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of NADH-cytochrome b5 reductase from pig liver at 2.4 A resolution.
Biochemistry, 34, 1995
1WE0
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CRYSTAL STRUCTURE OF PEROXIREDOXIN (AHPC) FROM AMPHIBACILLUS XYLANUS
Descriptor:alkyl hydroperoxide reductase C, AMMONIUM ION
Authors:Kitano, K., Kita, A., Hakoshima, T., Niimura, Y., Miki, K.
Deposit date:2004-05-21
Release date:2005-03-29
Last modified:2018-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of decameric peroxiredoxin (AhpC) from Amphibacillus xylanus
Proteins, 59, 2005
2YYG
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CRYSTAL STRUCTURE OF THE OXYGENASE COMPONENT (HPAB) OF 4-HYDROXYPHENYLACETATE 3-MONOOXYGENASE
Descriptor:4-hydroxyphenylacetate-3-hydroxylase, SULFATE ION
Authors:Kim, S.-H., Hisano, T., Takeda, K., Iwasaki, W., Ebihara, A., Miki, K.
Deposit date:2007-04-30
Release date:2007-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
2YYI
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CRYSTAL STRUCTURE OF THE OXYGENASE COMPONENT (HPAB) OF 4-HYDROXYPHENYLACETATE 3-MONOOXYGENASE COMPLEXED WITH FAD
Descriptor:4-hydroxyphenylacetate-3-hydroxylase, SULFATE ION, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kim, S.-H., Hisano, T., Takeda, K., Iwasaki, W., Ebihara, A., Miki, K.
Deposit date:2007-04-30
Release date:2007-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
2YYJ
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CRYSTAL STRUCTURE OF THE OXYGENASE COMPONENT (HPAB) OF 4-HYDROXYPHENYLACETATE 3-MONOOXYGENASE COMPLEXED WITH FAD AND 4-HYDROXYPHENYLACETATE
Descriptor:4-hydroxyphenylacetate-3-hydroxylase, SULFATE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Kim, S.-H., Hisano, T., Takeda, K., Iwasaki, W., Ebihara, A., Miki, K.
Deposit date:2007-04-30
Release date:2007-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
2YYK
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CRYSTAL STRUCTURE OF THE MUTANT OF HPAB (T198I, A276G, AND R466H)
Descriptor:4-hydroxyphenylacetate-3-hydroxylase, SODIUM ION, ACETIC ACID, ...
Authors:Kim, S.-H., Hisano, T., Takeda, K., Iwasaki, W., Ebihara, A., Miki, K.
Deposit date:2007-04-30
Release date:2007-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
2YYL
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CRYSTAL STRUCTURE OF THE MUTANT OF HPAB (T198I, A276G, AND R466H) COMPLEXED WITH FAD
Descriptor:4-hydroxyphenylacetate-3-hydroxylase, SULFATE ION, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kim, S.-H., Hisano, T., Takeda, K., Iwasaki, W., Ebihara, A., Miki, K.
Deposit date:2007-04-30
Release date:2007-09-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
2YYM
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CRYSTAL STRUCTURE OF THE MUTANT OF HPAB (T198I, A276G, AND R466H) COMPLEXED WITH FAD AND 4-HYDROXYPHENYLACETATE
Descriptor:4-hydroxyphenylacetate-3-hydroxylase, SULFATE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Kim, S.-H., Hisano, T., Takeda, K., Iwasaki, W., Ebihara, A., Miki, K.
Deposit date:2007-04-30
Release date:2007-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
1EYS
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CRYSTAL STRUCTURE OF PHOTOSYNTHETIC REACTION CENTER FROM A THERMOPHILIC BACTERIUM, THERMOCHROMATIUM TEPIDUM
Descriptor:PHOTOSYNTHETIC REACTION CENTER, PROTOPORPHYRIN IX CONTAINING FE, B-2-OCTYLGLUCOSIDE, ...
Authors:Nogi, T., Fathir, I., Kobayashi, M., Nozawa, T., Miki, K.
Deposit date:2000-05-08
Release date:2000-12-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of photosynthetic reaction center and high-potential iron-sulfur protein from Thermochromatium tepidum: thermostability and electron transfer.
Proc.Natl.Acad.Sci.USA, 97, 2000