Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5L8R
DownloadVisualize
BU of 5l8r by Molmil
The structure of plant photosystem I super-complex at 2.6 angstrom resolution.
Descriptor: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Mazor, Y, Borovikova, A, Caspy, I, Nelson, N.
Deposit date:2016-06-08
Release date:2017-03-15
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the plant photosystem I supercomplex at 2.6 angstrom resolution.
Nat Plants, 3, 2017
4L6V
DownloadVisualize
BU of 4l6v by Molmil
Crystal structure of a virus like photosystem I from the cyanobacterium Synechocystis PCC 6803
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Mazor, Y, Nataf, D, Toporik, H, Nelson, N.
Deposit date:2013-06-13
Release date:2014-02-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Crystal structures of virus-like photosystem I complexes from the mesophilic cyanobacterium Synechocystis PCC 6803.
Elife, 3, 2014
4KT0
DownloadVisualize
BU of 4kt0 by Molmil
Crystal structure of a virus like photosystem I from the cyanobacterium Synechocystis PCC 6803
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Mazor, Y, Nataf, D, Toporik, H, Nelson, N.
Deposit date:2013-05-19
Release date:2014-02-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of virus-like photosystem I complexes from the mesophilic cyanobacterium Synechocystis PCC 6803.
Elife, 3, 2014
4RKU
DownloadVisualize
BU of 4rku by Molmil
Crystal structure of plant Photosystem I at 3 Angstrom resolution
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Mazor, Y, Borovikova, A, Greenberg, I, Nelson, N.
Deposit date:2014-10-14
Release date:2015-02-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of plant Photosystem I at 3.1 Angstrom resolution
To be Published
4Y28
DownloadVisualize
BU of 4y28 by Molmil
The structure of plant photosystem I super-complex at 2.8 angstrom resolution.
Descriptor: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Mazor, Y, Brovikov, A, Nelson, N.
Deposit date:2015-02-09
Release date:2015-08-19
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structure of plant photosystem I super-complex at 2.8 angstrom resolution.
Elife, 4, 2015
8FB9
DownloadVisualize
BU of 8fb9 by Molmil
LH2-LH3 antenna in anti parallel configuration embedded in a nanodisc
Descriptor: BACTERIOCHLOROPHYLL A, LYCOPENE, Light-harvesting protein B-800/850 alpha chain, ...
Authors:Toporik, H, Harris, D, Schlau-Cohen, G.S, Mazor, Y.
Deposit date:2022-11-29
Release date:2023-07-19
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Elucidating interprotein energy transfer dynamics within the antenna network from purple bacteria.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FBB
DownloadVisualize
BU of 8fbb by Molmil
LH2-LH3 antenna in parallel configuration embedded in a nanodisc
Descriptor: BACTERIOCHLOROPHYLL A, LYCOPENE, Light-harvesting protein B-800/850 alpha chain, ...
Authors:Toporik, H, Harris, D, Schlau-Cohen, G.S, Mazor, Y.
Deposit date:2022-11-29
Release date:2023-07-19
Method:ELECTRON MICROSCOPY (11.3 Å)
Cite:Elucidating interprotein energy transfer dynamics within the antenna network from purple bacteria.
Proc.Natl.Acad.Sci.USA, 120, 2023
6NWA
DownloadVisualize
BU of 6nwa by Molmil
The structure of the photosystem I IsiA super-complex
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Toporik, H, Li, J, Williams, D, Chiu, P.L, Mazor, Y.
Deposit date:2019-02-06
Release date:2019-05-29
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:The structure of the stress-induced photosystem I-IsiA antenna supercomplex.
Nat.Struct.Mol.Biol., 26, 2019
8TJF
DownloadVisualize
BU of 8tjf by Molmil
monovalent bispecific IgG antibodies through novel electrostatic steering mutations at the CH1-CL interface
Descriptor: Fab Lambda light chain, IgG1 Fab heavy chain
Authors:Oganesyan, V.Y, van Dyk, N, Mazor, Y, Chiang, C.
Deposit date:2023-07-21
Release date:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Robust production of monovalent bispecific IgG antibodies through novel electrostatic steering mutations at the C H 1-C lambda interface.
Mabs, 15, 2023
8TI4
DownloadVisualize
BU of 8ti4 by Molmil
monovalent bispecific IgG antibodies through novel electrostatic steering mutations at the CH1-CL interface
Descriptor: GLYCEROL, IgG1 Fab heavy chain, mutated to promote correct pairing, ...
Authors:Oganesyan, V.Y, van Dyk, N, Mazor, Y.
Deposit date:2023-07-19
Release date:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Robust production of monovalent bispecific IgG antibodies through novel electrostatic steering mutations at the C H 1-C lambda interface.
Mabs, 15, 2023
7TV3
DownloadVisualize
BU of 7tv3 by Molmil
LH2-LH3 antenna in parallel configuration embedded in a nanodisc
Descriptor: BACTERIOCHLOROPHYLL A, LYCOPENE, Light-harvesting protein B-800/850 alpha chain, ...
Authors:Toporik, H, Harris, D, Schlau-Cohen, G.S, Mazor, Y.
Deposit date:2022-02-03
Release date:2023-02-15
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (11.4 Å)
Cite:Elucidating interprotein energy transfer dynamics within the antenna network from purple bacteria.
Proc.Natl.Acad.Sci.USA, 120, 2023
7TUW
DownloadVisualize
BU of 7tuw by Molmil
LH2-LH3 antenna in anti parallel configuration embedded in a nanodisc
Descriptor: BACTERIOCHLOROPHYLL A, LYCOPENE, Light-harvesting protein B-800/850 alpha chain, ...
Authors:Toporik, H, Harris, D, Schlau-Cohen, G.S, Mazor, Y.
Deposit date:2022-02-03
Release date:2023-02-15
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Elucidating interprotein energy transfer dynamics within the antenna network from purple bacteria.
Proc.Natl.Acad.Sci.USA, 120, 2023
7KU5
DownloadVisualize
BU of 7ku5 by Molmil
The Structure of the moss PSI-LHCI reveals the evolution of the LHCI antenna
Descriptor: BETA-CAROTENE, CHLOROPHYLL A, PsaO
Authors:Riddle, R, Gorski, C, Toporik, H, Dobson, Z, Da, Z, Williams, D, Mazor, Y.
Deposit date:2020-11-24
Release date:2022-03-30
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:The structure of the Physcomitrium patens photosystem I reveals a unique Lhca2 paralogue replacing Lhca4.
Nat.Plants, 8, 2022
7KSQ
DownloadVisualize
BU of 7ksq by Molmil
The Structure of the moss PSI-LHCI reveals the evolution of the LHCI antenna
Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Riddle, R, Gorski, C, Toporik, H, Dobson, Z, Da, Z, Williams, D, Mazor, Y.
Deposit date:2020-11-23
Release date:2022-03-30
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:The structure of the Physcomitrium patens photosystem I reveals a unique Lhca2 paralogue replacing Lhca4.
Nat.Plants, 8, 2022
7KUX
DownloadVisualize
BU of 7kux by Molmil
The Structure of the moss PSI-LHCI reveals the evolution of the LHCI antenna
Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Riddle, R, Gorski, C, Toporik, H, Dobson, Z, Da, Z, Williams, D, Mazor, Y.
Deposit date:2020-11-25
Release date:2022-03-30
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:The structure of the Physcomitrium patens photosystem I reveals a unique Lhca2 paralogue replacing Lhca4.
Nat.Plants, 8, 2022
7PI0
DownloadVisualize
BU of 7pi0 by Molmil
Unstacked compact Dunaliella PSII
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate, ...
Authors:Caspy, I, Fadeeva, M, Mazor, Y, Nelson, N.
Deposit date:2021-08-19
Release date:2022-08-17
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:Structure of Dunaliella Photosystem II reveals conformational flexibility of stacked and unstacked supercomplexes.
Elife, 12, 2023
7PI5
DownloadVisualize
BU of 7pi5 by Molmil
Unstacked stretched Dunaliella PSII
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate, ...
Authors:Caspy, I, Fadeeva, M, Mazor, Y, Nelson, N.
Deposit date:2021-08-19
Release date:2022-08-17
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Structure of Dunaliella Photosystem II reveals conformational flexibility of stacked and unstacked supercomplexes.
Elife, 12, 2023
7PIN
DownloadVisualize
BU of 7pin by Molmil
Stacked compact Dunaliella PSII
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate, ...
Authors:Caspy, I, Fadeeva, M, Mazor, Y, Nelson, N.
Deposit date:2021-08-22
Release date:2022-08-17
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of Dunaliella Photosystem II reveals conformational flexibility of stacked and unstacked supercomplexes.
Elife, 12, 2023
7PIW
DownloadVisualize
BU of 7piw by Molmil
Stacked stretched Dunaliella PSII
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate, ...
Authors:Caspy, I, Fadeeva, M, Mazor, Y, Nelson, N.
Deposit date:2021-08-23
Release date:2022-08-17
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of Dunaliella Photosystem II reveals conformational flexibility of stacked and unstacked supercomplexes.
Elife, 12, 2023
7PNK
DownloadVisualize
BU of 7pnk by Molmil
Unstacked compact Dunaliella PSII
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate, ...
Authors:Caspy, I, Fadeeva, M, Mazor, Y, Nelson, N.
Deposit date:2021-09-07
Release date:2022-08-17
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:Structure of Dunaliella Photosystem II reveals conformational flexibility of stacked and unstacked supercomplexes.
Elife, 12, 2023
7UMH
DownloadVisualize
BU of 7umh by Molmil
Energetic robustness to large scale structural dynamics in a photosynthetic supercomplex
Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Harris, D, Toporik, H, Schlau-Cohen, G.S, Mazor, Y.
Deposit date:2022-04-07
Release date:2023-05-17
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Energetic robustness to large scale structural fluctuations in a photosynthetic supercomplex.
Nat Commun, 14, 2023
6UZV
DownloadVisualize
BU of 6uzv by Molmil
The structure of a red shifted photosystem I complex
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Toporik, H, Williams, D, Chiu, P.L, Mazor, Y.
Deposit date:2019-11-15
Release date:2020-09-16
Last modified:2020-11-04
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The structure of a red-shifted photosystem I reveals a red site in the core antenna.
Nat Commun, 11, 2020
6VPV
DownloadVisualize
BU of 6vpv by Molmil
Trimeric Photosystem I from the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Dobson, Z, Toporik, H, Vaughn, N, Lin, S, Williams, D, Fromme, P, Mazor, Y.
Deposit date:2020-02-04
Release date:2021-08-04
Last modified:2021-09-08
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:The structure of photosystem I from a high-light tolerant Cyanobacteria.
Elife, 10, 2021
4UB0
DownloadVisualize
BU of 4ub0 by Molmil
New design for monovalent bispecific IgG through cysteine engineering of the CH1-CL interface
Descriptor: IgG1, heavy chain, light chain
Authors:Oganesyan, V.Y, Dall'Acqua, W.F.
Deposit date:2014-08-11
Release date:2015-07-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Improving target cell specificity using a novel monovalent bispecific IgG design.
Mabs, 7, 2015
4ZNE
DownloadVisualize
BU of 4zne by Molmil
IgG1 Fc-FcgammaRI ecd complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Oganesyan, V.Y, Dall'Acqua, W.F.
Deposit date:2015-05-04
Release date:2015-11-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structural insights into the interaction of human IgG1 with Fc gamma RI: no direct role of glycans in binding.
Acta Crystallogr.,Sect.D, 71, 2015

 

12>

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon