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1ZMR
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BU of 1zmr by Molmil
Crystal Structure of the E. coli Phosphoglycerate Kinase
Descriptor: CALCIUM ION, Phosphoglycerate kinase
Authors:Marqusee, S.
Deposit date:2005-05-10
Release date:2006-05-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Comparison of proteolytic susceptibility in phosphoglycerate kinases from yeast and E. coli: modulation of conformational ensembles without altering structure or stability.
J.Mol.Biol., 368, 2007
1DOF
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BU of 1dof by Molmil
THE CRYSTAL STRUCTURE OF ADENYLOSUCCINATE LYASE FROM PYROBACULUM AEROPHILUM: INSIGHTS INTO THERMAL STABILITY AND HUMAN PATHOLOGY
Descriptor: ADENYLOSUCCINATE LYASE
Authors:Toth, E.A, Yeates, T.O, Goedken, E, Dixon, J.E, Marqusee, S.
Deposit date:1999-12-20
Release date:2001-01-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of adenylosuccinate lyase from Pyrobaculum aerophilum reveals an intracellular protein with three disulfide bonds.
J.Mol.Biol., 301, 2000
3H08
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BU of 3h08 by Molmil
Crystal structure of the Ribonuclease H1 from Chlorobium tepidum
Descriptor: MAGNESIUM ION, Rnh (Ribonuclease H)
Authors:Ratcliff, K, Corn, J, Marqusee, S.
Deposit date:2009-04-08
Release date:2009-05-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure, stability, and folding of ribonuclease H1 from the moderately thermophilic chlorobium tepidum: comparison with thermophilic and mesophilic homologues.
Biochemistry, 48, 2009
8TQO
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BU of 8tqo by Molmil
Eukaryotic translation initiation factor 2B tetramer
Descriptor: Translation initiation factor eIF-2B subunit beta, Translation initiation factor eIF-2B subunit delta, Translation initiation factor eIF-2B subunit epsilon, ...
Authors:Wang, L, Lawrence, R, Sangwan, S, Anand, A, Shoemaker, S, Deal, A, Marqusee, S, Watler, P.
Deposit date:2023-08-08
Release date:2023-12-06
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:A helical fulcrum in eIF2B coordinates allosteric regulation of stress signaling.
Nat.Chem.Biol., 20, 2024
8TQZ
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BU of 8tqz by Molmil
Eukaryotic translation initiation factor 2B with a mutation (L516A) in the delta subunit
Descriptor: Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, Translation initiation factor eIF-2B subunit delta, ...
Authors:Wang, L, Lawrence, R, Sangwan, S, Anand, A, Shoemaker, S, Deal, A, Marqusee, S, Watler, P.
Deposit date:2023-08-08
Release date:2023-12-06
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:A helical fulcrum in eIF2B coordinates allosteric regulation of stress signaling.
Nat.Chem.Biol., 20, 2024
4LY7
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BU of 4ly7 by Molmil
Ancestral RNase H
Descriptor: Ribonuclease H, SULFATE ION
Authors:Hart, K.M, Harms, M.J, Schmidt, B.H, Elya, C, Thornton, J.W, Marqusee, S.
Deposit date:2013-07-30
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Thermodynamic system drift in protein evolution.
Plos Biol., 12, 2014
7UI5
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BU of 7ui5 by Molmil
Evolution avoids a pathological stabilizing interaction in the immune protein S100A9
Descriptor: CALCIUM ION, Protein S100-A9
Authors:Reardon, P.N, Harman, J.L, Costello, S.M, Warren, G.D, Phillips, S.R, Connor, P.J, Marqusee, S, Harms, M.J.
Deposit date:2022-03-28
Release date:2022-10-26
Method:SOLUTION NMR
Cite:Evolution avoids a pathological stabilizing interaction in the immune protein S100A9.
Proc.Natl.Acad.Sci.USA, 119, 2022
1JXB
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BU of 1jxb by Molmil
I53A, a point mutant of the cysteine-free variant of E. coli Rnase HI
Descriptor: Ribonuclease HI
Authors:Spudich, G, Lorenz, S, Marqusee, S.
Deposit date:2001-09-06
Release date:2002-03-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Propagation of a single destabilizing mutation throughout the Escherichia coli ribonuclease HI native state.
Protein Sci., 11, 2002
1JL2
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BU of 1jl2 by Molmil
Crystal structure of TCEO RNase H-a chimera combining the folding core from T. thermophilus RNase H and the remaining region of E. coli RNase H
Descriptor: Chimera of Ribonuclease HI, Ribonuclease H
Authors:Robic, S, Berger, J.M, Marqusee, S.
Deposit date:2001-07-13
Release date:2002-01-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Contributions of folding cores to the thermostabilities of two ribonucleases H.
Protein Sci., 11, 2002
1F21
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BU of 1f21 by Molmil
DIVALENT METAL COFACTOR BINDING IN THE KINETIC FOLDING TRAJECTORY OF E. COLI RIBONUCLEASE HI
Descriptor: RIBONUCLEASE HI
Authors:Goedken, E.R, Keck, J.L, Berger, J.M, Marqusee, S.
Deposit date:2000-05-22
Release date:2000-12-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Divalent metal cofactor binding in the kinetic folding trajectory of Escherichia coli ribonuclease HI.
Protein Sci., 9, 2000
1G15
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BU of 1g15 by Molmil
CO-CRYSTAL OF E. COLI RNASE HI WITH TWO MN2+ IONS BOUND IN THE THE ACTIVE SITE
Descriptor: MANGANESE (II) ION, RIBONUCLEASE HI
Authors:Goedken, E.R, Marqusee, S.
Deposit date:2000-10-10
Release date:2001-03-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Co-crystal of Escherichia coli RNase HI with Mn2+ ions reveals two divalent metals bound in the active site.
J.Biol.Chem., 276, 2001
2II0
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BU of 2ii0 by Molmil
Crystal Structure of catalytic domain of Son of sevenless (Rem-Cdc25) in the absence of Ras
Descriptor: Son of sevenless homolog 1
Authors:Freedman, T.S, Sondermann, H, Friedland, G.D, Kortemme, T, Bar-Sagi, D, Marqusee, S, Kuriyan, J.
Deposit date:2006-09-27
Release date:2006-10-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:A Ras-induced conformational switch in the Ras activator Son of sevenless.
Proc.Natl.Acad.Sci.Usa, 103, 2006
1JL1
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BU of 1jl1 by Molmil
D10A E. coli ribonuclease HI
Descriptor: RIBONUCLEASE HI
Authors:Goedken, E.R, Marqusee, S.
Deposit date:2001-07-13
Release date:2002-02-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Native-state energetics of a thermostabilized variant of ribonuclease HI.
J.Mol.Biol., 314, 2001
2O79
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BU of 2o79 by Molmil
T4 lysozyme with C-terminal extension
Descriptor: CHLORIDE ION, GLYCEROL, Lysozyme, ...
Authors:Llinas, M, Crowder, S.M, Echols, N, Alber, T, Marqusee, S.
Deposit date:2006-12-10
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Exploring subdomain cooperativity in T4 lysozyme I: Structural and energetic studies of a circular permutant and protein fragment.
Protein Sci., 16, 2007
2O4W
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BU of 2o4w by Molmil
T4 lysozyme circular permutant
Descriptor: CHLORIDE ION, Lysozyme
Authors:Llinas, M, Crowder, S.M, Echols, N, Alber, T, Marqusee, S.
Deposit date:2006-12-05
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Exploring subdomain cooperativity in T4 lysozyme I: Structural and energetic studies of a circular permutant and protein fragment.
Protein Sci., 16, 2007
6XHZ
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BU of 6xhz by Molmil
Alpha-lytic protease homolog N4
Descriptor: N4: hypothetical protein, SULFATE ION
Authors:Nixon, C.F, Marqusee, S.M, Gee, C.L.
Deposit date:2020-06-19
Release date:2021-01-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Exploring the Evolutionary History of Kinetic Stability in the alpha-Lytic Protease Family.
Biochemistry, 60, 2021
6UEW
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BU of 6uew by Molmil
Rubisco / CsoS2 N-peptide complex responsible for alpha-carboxysome cargo loading
Descriptor: Ribulose bisphosphate carboxylase large chain, CsoS2 N-peptide fusion, Ribulose bisphosphate carboxylase small chain
Authors:Oltrogge, L.M, Savage, D.F.
Deposit date:2019-09-23
Release date:2019-10-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Multivalent interactions between CsoS2 and Rubisco mediate alpha-carboxysome formation.
Nat.Struct.Mol.Biol., 27, 2020
7SA7
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BU of 7sa7 by Molmil
Crystal structure of the apo SH2 domains of Syk
Descriptor: Tyrosine-protein kinase SYK
Authors:Hobbs, H.T, Badroos, J, Gee, C.L, Kuriyan, J.
Deposit date:2021-09-22
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Differences in the dynamics of the tandem-SH2 modules of the Syk and ZAP-70 tyrosine kinases.
Protein Sci., 30, 2021
8FU6
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BU of 8fu6 by Molmil
GCGR-Gs complex in the presence of RAMP2
Descriptor: Glucagon derivative ZP3780, Glucagon receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Krishna Kumar, K, O'Brien, E.S, Wang, H, Montabana, E, Kobilka, B.K.
Deposit date:2023-01-16
Release date:2023-04-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Negative allosteric modulation of the glucagon receptor by RAMP2.
Cell, 186, 2023
2O7A
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BU of 2o7a by Molmil
T4 lysozyme C-terminal fragment
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme
Authors:Echols, N, Kwon, E, Marqusee, S.M, Alber, T.
Deposit date:2006-12-10
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Exploring subdomain cooperativity in T4 lysozyme I: Structural and energetic studies of a circular permutant and protein fragment.
Protein Sci., 16, 2007
4Z0U
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BU of 4z0u by Molmil
RNase HI/SSB-Ct complex
Descriptor: Ribonuclease H, SSB-Ct Peptide
Authors:Petzold, C, Keck, J.L.
Deposit date:2015-03-26
Release date:2015-04-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Interaction with Single-stranded DNA-binding Protein Stimulates Escherichia coli Ribonuclease HI Enzymatic Activity.
J.Biol.Chem., 290, 2015
1F1O
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BU of 1f1o by Molmil
STRUCTURAL STUDIES OF ADENYLOSUCCINATE LYASES
Descriptor: ADENYLOSUCCINATE LYASE
Authors:Toth, E.A, Yeates, T.
Deposit date:2000-05-19
Release date:2001-01-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:The crystal structure of adenylosuccinate lyase from Pyrobaculum aerophilum reveals an intracellular protein with three disulfide bonds.
J.Mol.Biol., 301, 2000
2IJE
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BU of 2ije by Molmil
Crystal Structure of the Cdc25 domain of RasGRF1
Descriptor: GLYCEROL, Guanine nucleotide-releasing protein
Authors:Freedman, T.S, Kuriyan, J.
Deposit date:2006-09-29
Release date:2006-10-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Ras-induced conformational switch in the Ras activator Son of sevenless.
Proc.Natl.Acad.Sci.Usa, 103, 2006
8T8M
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BU of 8t8m by Molmil
Quis-bound intermediate mGlu5
Descriptor: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, Metabotropic glutamate receptor 5, Nb43
Authors:Krishna Kumar, K, Wang, H, Kobilka, B.K.
Deposit date:2023-06-22
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Step-wise activation of a Family C GPCR.
Biorxiv, 2023
8T6J
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BU of 8t6j by Molmil
CDPPB-bound inactive mGlu5
Descriptor: 3-cyano-N-(1,3-diphenyl-1H-pyrazol-5-yl)benzamide, Metabotropic glutamate receptor 5
Authors:Krishna Kumar, K, Wang, H, Kobilka, B.K.
Deposit date:2023-06-16
Release date:2023-10-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Step-wise activation of a Family C GPCR.
Biorxiv, 2023

 

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