Author results

1ATI
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CRYSTAL STRUCTURE OF GLYCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS
Descriptor:GLYCYL-TRNA SYNTHETASE, GLYCYL-tRNA SYNTHETASE
Authors:Logan, D.T., Mazauric, M.-H., Kern, D., Moras, D.
Deposit date:1996-04-23
Release date:1997-07-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of glycyl-tRNA synthetase from Thermus thermophilus.
EMBO J., 14, 1995
1BIQ
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RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN MUTANT E238A
Descriptor:PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE, FE (II) ION, FE (III) ION, ...
Authors:Logan, D.T., Demare, F., Persson, B.O., Slaby, A., Sjoberg, B.M., Nordlund, P.
Deposit date:1998-06-18
Release date:1999-01-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of two self-hydroxylating ribonucleotide reductase protein R2 mutants: structural basis for the oxygen-insertion step of hydroxylation reactions catalyzed by diiron proteins.
Biochemistry, 37, 1998
1PFR
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RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN
Descriptor:PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE, FE (III) ION, MERCURY (II) ION
Authors:Logan, D.T., Su, X.D., Aberg, A., Regnstrom, K., Hajdu, J., Eklund, H., Nordlund, P.
Deposit date:1996-12-03
Release date:1997-03-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of reduced protein R2 of ribonucleotide reductase: the structural basis for oxygen activation at a dinuclear iron site.
Structure, 4, 1996
1XIK
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RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN
Descriptor:PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE, FE (II) ION, MERCURY (II) ION
Authors:Logan, D.T., Su, X.-D., Aberg, A., Regnstrom, K., Hajdu, J., Eklund, H., Nordlund, P.
Deposit date:1996-08-06
Release date:1997-03-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of reduced protein R2 of ribonucleotide reductase: the structural basis for oxygen activation at a dinuclear iron site.
Structure, 4, 1996
1HK8
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STRUCTURAL BASIS FOR ALLOSTERIC SUBSTRATE SPECIFICITY REGULATION IN CLASS III RIBONUCLEOTIDE REDUCTASES: NRDD IN COMPLEX WITH DGTP
Descriptor:ANAEROBIC RIBONUCLEOTIDE-TRIPHOSPHATE REDUCTASE, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ZINC ION, ...
Authors:Larsson, K.-M., Andersson, J., Sjoeberg, B.-M., Nordlund, P., Logan, D.T.
Deposit date:2003-03-06
Release date:2003-03-27
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:A Metal-Binding Site in the Catalytic Subunit of Anaerobic Ribonucleotide Reductase.
Proc.Natl.Acad.Sci.USA, 100, 2003
4A6R
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CRYSTAL STRUCTURE OF THE OMEGA TRANSAMINASE FROM CHROMOBACTERIUM VIOLACEUM IN THE APO FORM, CRYSTALLISED FROM POLYACRYLIC ACID
Descriptor:OMEGA TRANSAMINASE, POLYACRYLIC ACID
Authors:Logan, D.T., Hakansson, M., Yengo, K., Svedendahl Humble, M., Engelmark Cassimjee, K., Walse, B., Abedi, V., Federsel, H.-J., Berglund, P.
Deposit date:2011-11-08
Release date:2012-01-25
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (1.349 Å)
Cite:Crystal Structures of the Chromobacterium Violaceum Omega-Transaminase Reveal Major Structural Rearrangements Upon Binding of Coenzyme Plp.
FEBS J., 279, 2012
4A6T
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CRYSTAL STRUCTURE OF THE OMEGA TRANSAMINASE FROM CHROMOBACTERIUM VIOLACEUM IN COMPLEX WITH PLP
Descriptor:OMEGA TRANSAMINASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Logan, D.T., Hakansson, M., Yengo, K., Svedendahl Humble, M., Engelmark Cassimjee, K., Walse, B., Abedi, V., Federsel, H.-J., Berglund, P.
Deposit date:2011-11-08
Release date:2012-01-25
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of the Chromobacterium Violaceum Omega-Transaminase Reveal Major Structural Rearrangements Upon Binding of Coenzyme Plp.
FEBS J., 279, 2012
4A6U
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CRYSTAL STRUCTURE OF THE OMEGA TRANSAMINASE FROM CHROMOBACTERIUM VIOLACEUM IN THE APO FORM, CRYSTALLISED FROM PEG 3350
Descriptor:OMEGA TRANSAMINASE, THIOCYANATE ION, SODIUM ION
Authors:Logan, D.T., Hakansson, M., Yengo, K., Svedendahl Humble, M., Engelmark Cassimjee, K., Walse, B., Abedi, V., Federsel, H.-J., Berglund, P.
Deposit date:2011-11-08
Release date:2012-01-25
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (1.687 Å)
Cite:Crystal Structures of the Chromobacterium Violaceum Omega-Transaminase Reveal Major Structural Rearrangements Upon Binding of Coenzyme Plp.
FEBS J., 279, 2012
4A72
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CRYSTAL STRUCTURE OF THE OMEGA TRANSAMINASE FROM CHROMOBACTERIUM VIOLACEUM IN A MIXTURE OF APO AND PLP-BOUND STATES
Descriptor:OMEGA TRANSAMINASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Logan, D.T., Hakansson, M., Yengo, K., Svedendahl Humble, M., Engelmark Cassimjee, K., Walse, B., Abedi, V., Federsel, H.-J., Berglund, P.
Deposit date:2011-11-10
Release date:2012-01-25
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of the Chromobacterium Violaceum Omega-Transaminase Reveal Major Structural Rearrangements Upon Binding of Coenzyme Plp.
FEBS J., 279, 2012
4TW1
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CRYSTAL STRUCTURE OF THE OCTAMERIC PORE COMPLEX OF THE STAPHYLOCOCCUS AUREUS BI-COMPONENT TOXIN LUKGH
Descriptor:Possible leukocidin subunit
Authors:LOGAN, D.T., HAKANSSON, M., SALINE, M., KIMBUNG, R., BADARAU, A., ROUHA, H., NAGY, E.
Deposit date:2014-06-29
Release date:2014-11-12
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-Function Analysis of Heterodimer Formation, Oligomerization, and Receptor Binding of the Staphylococcus aureus Bi-component Toxin LukGH.
J.Biol.Chem., 290, 2015
5M8B
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CRYSTAL STRUCTURE OF ALPHA-L-ARABINOFURANOSIDASE FROM LACTOBACILLUS BREVIS
Descriptor:Alpha-L-arabinofuranosidase II, MAGNESIUM ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Logan, D.T., Nordberg Karlsson, E., Linares-Pasten, J.A.
Deposit date:2016-10-28
Release date:2017-05-10
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of alpha-L-arabinofuranosidase from Lactobacillus brevis
To Be Published
4YWT
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CRYSTAL STRUCTURE OF FULL-LENGTH GLYPICAN-1 CORE PROTEIN AFTER CONTROLLED CRYSTAL DEHYDRATION TO 87% RELATIVE HUMIDITY
Descriptor:Glypican-1, N-ACETYL-D-GLUCOSAMINE, CALCIUM ION
Authors:Awad, W., Mani, K., Logan, D.T.
Deposit date:2015-03-21
Release date:2015-07-29
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structural Aspects of N-Glycosylations and the C-terminal Region in Human Glypican-1.
J.Biol.Chem., 290, 2015
2BV3
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CRYSTAL STRUCTURE OF A MUTANT ELONGATION FACTOR G TRAPPED WITH A GTP ANALOGUE
Descriptor:ELONGATION FACTOR G, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, MAGNESIUM ION
Authors:Hansson, S., Singh, R., Gudkov, A.T., Liljas, A., Logan, D.T.
Deposit date:2005-06-22
Release date:2005-08-10
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of a Mutant Elongation Factor G Trapped with a GTP Analogue.
FEBS Lett., 579, 2005
2J7K
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CRYSTAL STRUCTURE OF THE T84A MUTANT EF-G:GDPCP COMPLEX
Descriptor:ELONGATION FACTOR G, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, MAGNESIUM ION
Authors:Hansson, S., Logan, D.T.
Deposit date:2006-10-12
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:New Insights Into the Role of the P-Loop Lysine: Implications from the Crystal Structure of a Mutant EF-G:Gdpcp Complex
To be Published
2X40
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STRUCTURE OF BETA-GLUCOSIDASE 3B FROM THERMOTOGA NEAPOLITANA IN COMPLEX WITH GLYCEROL
Descriptor:BETA-GLUCOSIDASE, BROMIDE ION, GLYCEROL
Authors:Pozzo, T., Karlsson, E.N., Logan, D.T.
Deposit date:2010-01-28
Release date:2010-02-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.313 Å)
Cite:Structural and Functional Analysis of Beta-Glucosidase 3B from Thermotoga Neapolitana: A Thermostable 3-Domain Representative of Glycoside Hydrolase Family 3
J.Mol.Biol., 397, 2010
2X41
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STRUCTURE OF BETA-GLUCOSIDASE 3B FROM THERMOTOGA NEAPOLITANA IN COMPLEX WITH GLUCOSE
Descriptor:BETA-GLUCOSIDASE, BROMIDE ION, BETA-D-GLUCOSE
Authors:Pozzo, T., Karlsson, E.N., Logan, D.T.
Deposit date:2010-01-28
Release date:2010-02-09
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and Functional Analysis of Beta-Glucosidase 3B from Thermotoga Neapolitana: A Thermostable 3-Domain Representative of Glycoside Hydrolase Family 3
J.Mol.Biol., 397, 2010
2X42
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STRUCTURE OF BETA-GLUCOSIDASE 3B FROM THERMOTOGA NEAPOLITANA IN COMPLEX WITH ALPHA-D-GLUCOSE
Descriptor:BETA-GLUCOSIDASE, ALPHA-D-GLUCOSE, BROMIDE ION
Authors:Pozzo, T., Karlsson, E.N., Logan, D.T.
Deposit date:2010-01-28
Release date:2010-02-09
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Structural and Functional Analysis of Beta-Glucosidase 3B from Thermotoga Neapolitana: A Thermostable 3-Domain Representative of Glycoside Hydrolase Family 3
J.Mol.Biol., 397, 2010
2XJK
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MONOMERIC HUMAN CU,ZN SUPEROXIDE DISMUTASE
Descriptor:SUPEROXIDE DISMUTASE [CU-ZN], COPPER (II) ION, ZINC ION
Authors:Saraboji, K., Leinartaite, L., Nordlund, A., Oliveberg, M., Logan, D.T.
Deposit date:2010-07-07
Release date:2010-09-01
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Folding Catalysis by Transient Coordination of Zn2+ to the Cu Ligands of the Als-Associated Enzyme Cu/Zn Superoxide Dismutase 1.
J.Am.Chem.Soc., 132, 2010
2XJL
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MONOMERIC HUMAN CU,ZN SUPEROXIDE DISMUTASE WITHOUT CU LIGANDS
Descriptor:SUPEROXIDE DISMUTASE [CU-ZN], ZINC ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Saraboji, K., Leinartaite, L., Nordlund, A., Oliveberg, M., Logan, D.T.
Deposit date:2010-07-07
Release date:2010-09-01
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Folding Catalysis by Transient Coordination of Zn2+ to the Cu Ligands of the Als-Associated Enzyme Cu/Zn Superoxide Dismutase 1.
J.Am.Chem.Soc., 132, 2010
4BWE
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CRYSTAL STRUCTURE OF C-TERMINALLY TRUNCATED GLYPICAN-1 AFTER CONTROLLED DEHYDRATION TO 86 PERCENT RELATIVE HUMIDITY
Descriptor:Glypican-1, N-ACETYL-D-GLUCOSAMINE, CALCIUM ION
Authors:Awad, W., Svensson Birkedal, G., Thunnissen, M.M.G.M., Mani, K., Logan, D.T.
Deposit date:2013-07-01
Release date:2013-12-18
Last modified:2018-11-28
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Improvements in the order, isotropy and electron density of glypican-1 crystals by controlled dehydration.
Acta Crystallogr. D Biol. Crystallogr., 69, 2013
5LFN
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CRYSTAL STRUCTURE OF HUMAN CHONDROADHERIN
Descriptor:Chondroadherin, CHLORIDE ION
Authors:RAMISCH, S., PRAMHED, A., LOGAN, D.T.
Deposit date:2016-07-03
Release date:2016-12-28
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human chondroadherin: solving a difficult molecular-replacement problem using de novo models.
Acta Crystallogr D Struct Biol, 73, 2017
6EXY
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NEUTRON CRYSTAL STRUCTURE OF PERDEUTERATED GALECTIN-3C IN COMPLEX WITH GLYCEROL
Descriptor:Galectin-3, GLYCEROL
Authors:Manzoni, F., Schrader, T.E., Ostermann, A., Oksanen, E., Logan, D.T.
Deposit date:2017-11-10
Release date:2018-09-12
Method:X-RAY DIFFRACTION (1.1 Å), NEUTRON DIFFRACTION
Cite:Elucidation of Hydrogen Bonding Patterns in Ligand-Free, Lactose- and Glycerol-Bound Galectin-3C by Neutron Crystallography to Guide Drug Design.
J. Med. Chem., 61, 2018
6EYM
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NEUTRON CRYSTAL STRUCTURE OF PERDEUTERATED GALECTIN-3C IN COMPLEX WITH LACTOSE
Descriptor:Galectin-3, BETA-LACTOSE
Authors:Manzoni, F., Coates, L., Blakeley, M.P., Oksanen, E., Logan, D.T.
Deposit date:2017-11-13
Release date:2018-09-12
Last modified:2018-12-12
Method:X-RAY DIFFRACTION (1.7 Å), NEUTRON DIFFRACTION
Cite:Elucidation of Hydrogen Bonding Patterns in Ligand-Free, Lactose- and Glycerol-Bound Galectin-3C by Neutron Crystallography to Guide Drug Design.
J. Med. Chem., 61, 2018
6F2Q
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NEUTRON CRYSTAL STRUCTURE OF PERDEUTERATED GALECTIN-3C IN THE LIGAND-FREE FORM
Descriptor:Galectin-3
Authors:Manzoni, F., Blakeley, M.P., Oksanen, E., Logan, D.T.
Deposit date:2017-11-27
Release date:2018-05-02
Last modified:2018-06-06
Method:X-RAY DIFFRACTION (1.03 Å), NEUTRON DIFFRACTION
Cite:Elucidation of Hydrogen Bonding Patterns in Ligand-Free, Lactose- and Glycerol-Bound Galectin-3C by Neutron Crystallography to Guide Drug Design.
J. Med. Chem., 61, 2018
1H78
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STRUCTURAL BASIS FOR ALLOSTERIC SUBSTRATE SPECIFICITY REGULATION IN CLASS III RIBONUCLEOTIDE REDUCTASES: NRDD IN COMPLEX WITH DCTP.
Descriptor:ANAEROBIC RIBONUCLEOTIDE-TRIPHOSPHATE REDUCTASE LARGE CHAIN, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Larsson, K.-M., Andersson, J., Sjoeberg, B.-M., Nordlund, P., Logan, D.T.
Deposit date:2001-07-04
Release date:2002-07-04
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Allosteric Substrate Specificty Regulation in Anaerobic Ribonucleotide Reductase
Structure, 9, 2001