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6GRB
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EUKARYOTIC JUNCTION-RESOLVING ENZYME GEN-1 BINDING WITH POTASSIUM
Descriptor:Nuclease-like protein, DNA (5'-D(*TP*GP*AP*GP*CP*GP*GP*TP*GP*GP*TP*TP*GP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*CP*CP*AP*CP*CP*AP*CP*CP*GP*CP*TP*CP*A)-3'), ...
Authors:Lilley, D.M.J., Liu, Y., Freeman, D.J.
Deposit date:2018-06-11
Release date:2018-09-26
Last modified:2018-11-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A monovalent ion in the DNA binding interface of the eukaryotic junction-resolving enzyme GEN1.
Nucleic Acids Res., 46, 2018
6GRC
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EUKARYOTIC JUNCTION-RESOLVING ENZYME GEN-1 BINDING WITH SODIUM
Descriptor:Nuclease-like protein, DNA (5'-D(*TP*GP*AP*GP*CP*GP*GP*TP*GP*GP*TP*TP*GP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*CP*CP*AP*CP*CP*AP*CP*CP*GP*CP*TP*CP*A)-3'), ...
Authors:Lilley, D.M.J., Liu, Y., Freeman, D.J.
Deposit date:2018-06-11
Release date:2018-09-26
Last modified:2019-02-13
Method:X-RAY DIFFRACTION (2.452 Å)
Cite:A monovalent ion in the DNA binding interface of the eukaryotic junction-resolving enzyme GEN1.
Nucleic Acids Res., 46, 2018
6GRD
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EUKARYOTIC JUNCTION-RESOLVING ENZYME GEN-1 BINDING WITH CESIUM
Descriptor:Nuclease-like protein, DNA (5'-D(*TP*GP*AP*GP*CP*GP*GP*TP*GP*GP*TP*TP*GP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*CP*CP*AP*CP*CP*AP*CP*CP*GP*CP*TP*CP*A)-3'), ...
Authors:Lilley, D.M.J., Liu, Y., Freeman, D.J.
Deposit date:2018-06-11
Release date:2018-09-26
Last modified:2018-11-28
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:A monovalent ion in the DNA binding interface of the eukaryotic junction-resolving enzyme GEN1.
Nucleic Acids Res., 46, 2018
2YDH
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CRYSTAL STRUCTURE OF THE SAM-I RIBOSWITCH A94G U34 G18U G19U VARIANT IN COMPLEX WITH SAM
Descriptor:SAM-I RIBOSWITCH, BARIUM ION, S-ADENOSYLMETHIONINE
Authors:Schroeder, K.T., Daldrop, P., Lilley, D.M.J.
Deposit date:2011-03-21
Release date:2011-09-07
Last modified:2016-09-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:RNA Tertiary Interactions in a Riboswitch Stabilize the Structure of a Kink Turn.
Structure, 19, 2011
4AOB
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SAM-I RIBOSWITCH CONTAINING THE T. SOLENOPSAE KT-23 IN COMPLEX WITH S- ADENOSYL METHIONINE
Descriptor:SAM-I RIBOSWITCH, BARIUM ION, POTASSIUM ION, ...
Authors:Schroeder, K.T., Daldrop, P., McPhee, S.A., Lilley, D.M.J.
Deposit date:2012-03-25
Release date:2012-05-09
Last modified:2012-05-30
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure and Folding of a Rare, Natural Kink Turn in RNA with an Aa Pair at the 2B2N Position.
RNA, 18, 2012
4B5R
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SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI K-T-7
Descriptor:SAM-I RIBOSWITCH, S-ADENOSYLMETHIONINE, BARIUM ION, ...
Authors:Daldrop, P., Lilley, D.M.J.
Deposit date:2012-08-07
Release date:2013-01-30
Last modified:2013-03-06
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The Plasticity of a Structural Motif in RNA: Structural Polymorphism of a Kink Turn as a Function of its Environment.
RNA, 19, 2013
4BW0
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THE MOLECULAR RECOGNITION OF KINK TURN STRUCTURE BY THE L7AE CLASS OF PROTEINS
Descriptor:HMKT-7, 50S RIBOSOMAL PROTEIN L7AE, SULFATE ION
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2013-06-29
Release date:2013-11-06
Last modified:2013-11-27
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:The Molecular Recognition of Kink-Turn Structure by the L7Ae Class of Proteins.
RNA, 19, 2013
4C40
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THE MOLECULAR RECOGNITION OF KINK TURN STRUCTURE BY THE L7AE CLASS OF PROTEINS
Descriptor:5'-(*GP*GP*CP*GP*AP*AP*GP*AP*AP*CP*CP*GP*GP*GP *GP*AP*GP*CP*C)-3'
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2013-08-28
Release date:2013-11-06
Last modified:2013-11-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Molecular Recognition of Kink-Turn Structure by the L7Ae Class of Proteins.
RNA, 19, 2013
4C4W
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STRUCTURE OF A RARE, NON-STANDARD SEQUENCE K-TURN BOUND BY L7AE PROTEIN
Descriptor:U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A, 50S RIBOSOMAL PROTEIN L7AE, TSKT-23, ...
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2013-09-09
Release date:2014-02-12
Last modified:2014-04-30
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of a Rare, Non-Standard Sequence K-Turn Bound by L7Ae Protein
Nucleic Acids Res., 42, 2014
4CS1
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CRYSTAL STRUCTURE OF A SIMPLE DUPLEX KINK TURN, HMKT-7 WITH 2 MG BOUND.
Descriptor:5'-(*GP*GP*CP*GP*AP*AP*GP*AP*AP*CP*CP*GP*GP*GP *GP*AP*GP*CP*CP)-3', MAGNESIUM ION
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2014-03-03
Release date:2014-11-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Critical Base Pair in K-Turns that Confers Folding Characteristics and Correlates with Biological Function.
Nat.Commun., 5, 2014
5FJ0
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STRUCTURE OF THE STANDARD KINK TURN HMKT-7 AS SIMPLE DUPLEX IN P4222 SPACE GROUP
Descriptor:HMKT-7, MAGNESIUM ION
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-05
Release date:2016-09-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FJ1
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STRUCTURE OF THE STANDARD KINK TURN HMKT-7 AS STEM LOOP IN P212121 SPACE GROUP
Descriptor:HMKT-7, MAGNESIUM ION, SODIUM ION
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-05
Release date:2016-05-25
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FJ4
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STRUCTURE OF THE STANDARD KINK TURN HMKT-7 AS STEM LOOP BOUND WITH U1A AND L7AE PROTEINS
Descriptor:U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A, 50S RIBOSOMAL PROTEIN L7AE, HMKT-7
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-06
Release date:2016-05-25
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FJC
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SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT C-2BU
Descriptor:SAM-I RIBOSWITCH, S-ADENOSYLMETHIONINE, BARIUM ION, ...
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-07
Release date:2016-05-25
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FK1
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SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS UG
Descriptor:SAM-I RIBOSWITCH, S-ADENOSYLMETHIONINE, BARIUM ION, ...
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-14
Release date:2016-05-25
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FK2
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SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS GG
Descriptor:SAM-I RIBOSWITCH, S-ADENOSYLMETHIONINE, BARIUM ION
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-14
Release date:2016-05-25
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FK3
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SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS CC
Descriptor:SAM-I RIBOSWITCH, S-ADENOSYLMETHIONINE, BARIUM ION, ...
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-14
Release date:2016-05-25
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FK4
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SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS UU
Descriptor:SAM-I RIBOSWITCH, S-ADENOSYLMETHIONINE, BARIUM ION
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-14
Release date:2016-05-25
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FK5
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SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS AA
Descriptor:SAM-I RIBOSWITCH, S-ADENOSYLMETHIONINE, BARIUM ION, ...
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-14
Release date:2016-05-25
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (3.315 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FK6
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SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS CA
Descriptor:SAM-I RIBOSWITCH, S-ADENOSYLMETHIONINE, BARIUM ION, ...
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-14
Release date:2016-05-25
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FKD
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SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS UA
Descriptor:SAM-I RIBOSWITCH, S-ADENOSYLMETHIONINE, BARIUM ION, ...
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-15
Release date:2016-05-25
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FKE
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SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS GU
Descriptor:SAM-I RIBOSWITCH, S-ADENOSYLMETHIONINE, BARIUM ION, ...
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-15
Release date:2016-05-25
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FKF
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SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS UC
Descriptor:SAM-I RIBOSWITCH, S-ADENOSYLMETHIONINE, BARIUM ION, ...
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-15
Release date:2016-05-25
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FKG
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SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS CG
Descriptor:SAM-I RIBOSWITCH, S-ADENOSYLMETHIONINE, BARIUM ION, ...
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-15
Release date:2016-05-25
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FKH
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SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS CU
Descriptor:SAM-I RIBOSWITCH, S-ADENOSYLMETHIONINE, BARIUM ION, ...
Authors:Huang, L., Lilley, D.M.J.
Deposit date:2015-10-15
Release date:2016-05-25
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
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