Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2R96
DownloadVisualize
BU of 2r96 by Molmil
Crystal structure of E. coli WrbA in complex with FMN
Descriptor: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, Flavoprotein WrbA
Authors:Kuta Smatanova, I, Wolfova, J, Brynda, J, Mesters, J.R, Grandori, R, Carey, J.
Deposit date:2007-09-12
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural organization of WrbA in apo- and holoprotein crystals.
Biochim.Biophys.Acta, 1794, 2009
2R97
DownloadVisualize
BU of 2r97 by Molmil
Crystal structure of E. coli WrbA in complex with FMN
Descriptor: FLAVIN MONONUCLEOTIDE, Flavoprotein WrbA
Authors:Kuta Smatanova, I, Wolfova, J, Brynda, J, Mesters, J.R, Grandori, R, Carey, J.
Deposit date:2007-09-12
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural organization of WrbA in apo- and holoprotein crystals.
Biochim.Biophys.Acta, 1794, 2009
6F9O
DownloadVisualize
BU of 6f9o by Molmil
Crystal structure of cold-adapted haloalkane dehalogenase DpcA from Psychrobacter cryohalolentis K5
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Haloalkane dehalogenase, ...
Authors:Tratsiak, K, Prudnikova, T, Drienovska, I, Damborsky, J, Brynda, J, Pachl, P, Kuty, M, Chaloupkova, R, Kuta Smatanova, I, Rezacova, P.
Deposit date:2017-12-15
Release date:2019-02-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Crystal structure of the cold-adapted haloalkane dehalogenase DpcA from Psychrobacter cryohalolentis K5.
Acta Crystallogr.,Sect.F, 75, 2019
8AND
DownloadVisualize
BU of 8and by Molmil
Domain swapped dimer of smolstatin (stefin) from Sphaerospora molnari
Descriptor: 1,2-ETHANEDIOL, Smolstatin
Authors:Havlickova, P, Bartosova-Sojkova, P, Sojka, D, Kascakova, B, Gavira, J.A, Kuta Smatanova, I.
Deposit date:2022-08-05
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:Domain swapped dimer of smolstatin (stefin) from Sphaerospora molnari
To Be Published
3FWH
DownloadVisualize
BU of 3fwh by Molmil
Structure of haloalkane dehalogenase mutant Dha15 (I135F/C176Y) from Rhodococcus rhodochrous
Descriptor: ACETATE ION, CHLORIDE ION, Haloalkane dehalogenase, ...
Authors:Gavira, J.A, Stsiapanava, A, Kuty, M, Dohnalek, J, Lapkouski, M, Kuta Smatanova, I.
Deposit date:2009-01-18
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Atomic resolution studies of haloalkane dehalogenases DhaA04, DhaA14 and DhaA15 with engineered access tunnels.
Acta Crystallogr.,Sect.D, 66, 2010
3G9X
DownloadVisualize
BU of 3g9x by Molmil
Structure of haloalkane dehalogenase DhaA14 mutant I135F from Rhodococcus rhodochrous
Descriptor: ACETATE ION, CHLORIDE ION, Haloalkane dehalogenase, ...
Authors:Gavira, J.A, Stsiapanava, A, Kuty, M, Lapkouski, M, Dohnalek, J, Kuta Smatanova, I.
Deposit date:2009-02-15
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Atomic resolution studies of haloalkane dehalogenases DhaA04, DhaA14 and DhaA15 with engineered access tunnels.
Acta Crystallogr.,Sect.D, 66, 2010
4PAC
DownloadVisualize
BU of 4pac by Molmil
Crystal Structure of Histidine-containing Phosphotransfer Protein AHP2 from Arabidopsis thaliana
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Histidine-containing phosphotransfer protein 2, IMIDAZOLE
Authors:Degtjarik, O, Dopitova, R, Puehringer, S, Weiss, M.S, Janda, L, Hejatko, J, Kuta-Smatanova, I.
Deposit date:2014-04-08
Release date:2015-05-20
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Crystal structure of AHP2 from Arabidopsis thaliana
To Be Published
6XY9
DownloadVisualize
BU of 6xy9 by Molmil
Crystal structure of haloalkane dehalogenase DbeA-M1 loop variant from Bradyrhizobium elkanii
Descriptor: ACETATE ION, CHLORIDE ION, Haloalkane dehalogenase
Authors:Prudnikova, T, Rezacova, P, Kuta Smatanova, I, Chaloupkova, R, Damborsky, J.
Deposit date:2020-01-29
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and catalytic effects of surface loop-helix transplantation within haloalkane dehalogenase family.
Comput Struct Biotechnol J, 18, 2020
4YQE
DownloadVisualize
BU of 4yqe by Molmil
Crystal structure of E. coli WrbA in complex with benzoquinone
Descriptor: 1,4-benzoquinone, FLAVIN MONONUCLEOTIDE, NAD(P)H dehydrogenase (quinone)
Authors:Degtjarik, O, Brynda, J, Ettrichova, O, Carey, J, Kuta Smatanova, I, Ettrich, R.
Deposit date:2015-03-13
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Quantum Calculations Indicate Effective Electron Transfer between FMN and Benzoquinone in a New Crystal Structure of Escherichia coli WrbA.
J.Phys.Chem.B, 120, 2016
2VU4
DownloadVisualize
BU of 2vu4 by Molmil
Structure of PsbP protein from Spinacia oleracea at 1.98 A resolution
Descriptor: OXYGEN-EVOLVING ENHANCER PROTEIN 2, ZINC ION
Authors:Lapkouski, M, Ristvejova, R, Arellano, J.B, Revuelta, J.L, Kuta Smatanova, I, Ettrich, R.
Deposit date:2008-05-21
Release date:2009-07-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Raman Spectroscopy Adds Complementary Detail to the High-Resolution X-Ray Crystal Structure of Photosynthetic Psbp from Spinacia Oleracea.
Plos One, 7, 2012
3RK4
DownloadVisualize
BU of 3rk4 by Molmil
Structure of Rhodococcus rhodochrous haloalkane dehalogenase mutant DhaA31
Descriptor: CHLORIDE ION, Haloalkane dehalogenase
Authors:Lahoda, M, Stsiapanava, A, Mesters, J, Chaloupkova, R, Damborsky, J, Kuta Smatanova, I.
Deposit date:2011-04-17
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Crystallographic analysis of 1,2,3-trichloropropane biodegradation by the haloalkane dehalogenase DhaA31.
Acta Crystallogr.,Sect.D, 70, 2014
7QTZ
DownloadVisualize
BU of 7qtz by Molmil
Crystal structure of Iripin-1 serpin from tick Ixodes ricinus
Descriptor: MAGNESIUM ION, Putative salivary serpin
Authors:Kascakova, B, Kuta Smatanova, I, Chmelar, J, Prudnikova, T.
Deposit date:2022-01-17
Release date:2023-01-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Iripin-1, a new anti-inflammatory tick serpin, inhibits leukocyte recruitment in vivo while altering the levels of chemokines and adhesion molecules.
Front Immunol, 14, 2023
5EDF
DownloadVisualize
BU of 5edf by Molmil
Crystal structure of the selenomethionine-substituted iron-regulated protein FrpD from Neisseria meningitidis
Descriptor: AZIDE ION, FrpC operon protein, HEXAETHYLENE GLYCOL, ...
Authors:Sviridova, E, Bumba, L, Rezacova, P, Sebo, P, Kuta Smatanova, I.
Deposit date:2015-10-21
Release date:2017-02-01
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural basis of the interaction between the putative adhesion-involved and iron-regulated FrpD and FrpC proteins of Neisseria meningitidis.
Sci Rep, 7, 2017
5EDJ
DownloadVisualize
BU of 5edj by Molmil
Crystal structure of the Neisseria meningitidis iron-regulated outer membrane lipoprotein FrpD
Descriptor: FrpC operon protein
Authors:Sviridova, E, Bumba, L, Rezacova, P, Sebo, P, Kuta Smatanova, I.
Deposit date:2015-10-21
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of the interaction between the putative adhesion-involved and iron-regulated FrpD and FrpC proteins of Neisseria meningitidis.
Sci Rep, 7, 2017
5J77
DownloadVisualize
BU of 5j77 by Molmil
Mutant glyceraldehyde dehydrogenase (F34M+S405N) from Thermoplasma acidophilum
Descriptor: D-glyceraldehyde dehydrogenase (NADP(+))
Authors:Iermak, I, Mesters, J.R, Kuta Smatanova, I.
Deposit date:2016-04-06
Release date:2017-05-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of wild-type glyceraldehyde dehydrogenase from Thermoplasma acidophilum in complex with NADP
To Be Published
5IZD
DownloadVisualize
BU of 5izd by Molmil
Wild-type glyceraldehyde dehydrogenase from Thermoplasma acidophilum in complex with NADP
Descriptor: D-glyceraldehyde dehydrogenase (NADP(+)), NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Iermak, I, Mesters, J.R, Kuta Smatanova, I.
Deposit date:2016-03-25
Release date:2017-04-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of wild-type glyceraldehyde dehydrogenase from Thermoplasma acidophilum in complex with NADP
To Be Published
7ZAS
DownloadVisualize
BU of 7zas by Molmil
Crystal structure of cleaved Iripin-4 serpin from tick Ixodes ricinus
Descriptor: CHLORIDE ION, Iripin-4 serpin
Authors:Kascakova, B, Kuta Smatanova, I, Chmelar, J, Prudnikova, T.
Deposit date:2022-03-22
Release date:2023-03-29
Last modified:2023-05-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational transition of the Ixodes ricinus salivary serpin Iripin-4.
Acta Crystallogr D Struct Biol, 79, 2023
7ZBF
DownloadVisualize
BU of 7zbf by Molmil
Crystal structure of native Iripin-4 serpin from tick Ixodes ricinus
Descriptor: Iripin-4 serpin, NICKEL (II) ION
Authors:Kascakova, B, Kuta Smatanova, I, Chmelar, J, Prudnikova, T.
Deposit date:2022-03-23
Release date:2023-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Conformational transition of the Ixodes ricinus salivary serpin Iripin-4.
Acta Crystallogr D Struct Biol, 79, 2023
6S06
DownloadVisualize
BU of 6s06 by Molmil
Crystal structure of haloalkane dehalogenase LinB D147C+L177C mutant (LinB73) from Sphingobium japonicum UT26
Descriptor: CHLORIDE ION, Haloalkane dehalogenase, MAGNESIUM ION
Authors:Iermak, I, Mesters, J.R, Degtjarik, O, Chaloupkova, R, Kuta Smatanova, I.
Deposit date:2019-06-14
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Description of Transport Tunnel in Haloalkane Dehalogenase Variant LinB D147C+L177C from Sphingobium japonicum
Catalysts, 2021
7O3O
DownloadVisualize
BU of 7o3o by Molmil
Structure of haloalkane dehalogenase mutant DhaA80(T148L, G171Q, A172V, C176F) from Rhodococcus rhodochrous with ionic liquid
Descriptor: CHLORIDE ION, ETHANOLAMINE, Haloalkane dehalogenase
Authors:Shaposhnikova, A, Prudnikova, T, Kuta Smatanova, I.
Deposit date:2021-04-02
Release date:2021-09-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Stabilization of Haloalkane Dehalogenase Structure by Interfacial Interaction with Ionic Liquids
Crystals, 11, 2021
7O8B
DownloadVisualize
BU of 7o8b by Molmil
Structure of haloalkane dehalogenase variant DhaA80 from Rhodococcus rhodochrous
Descriptor: Haloalkane dehalogenase, methyl sulfate
Authors:Shaposhnikova, A, Prudnikova, T, Kuta Smatanova, I.
Deposit date:2021-04-15
Release date:2021-09-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Stabilization of Haloalkane Dehalogenase Structure by Interfacial Interaction with Ionic Liquids
Crystals, 11, 2021
1G42
DownloadVisualize
BU of 1g42 by Molmil
STRUCTURE OF 1,3,4,6-TETRACHLORO-1,4-CYCLOHEXADIENE HYDROLASE (LINB) FROM SPHINGOMONAS PAUCIMOBILIS COMPLEXED WITH 1,2-DICHLOROPROPANE
Descriptor: 1,2-DICHLORO-PROPANE, 1,3,4,6-TETRACHLORO-1,4-CYCLOHEXADIENE HYDROLASE, ACETATE ION, ...
Authors:Oakley, A.J, Prokop, Z, Bohac, M, Kmunicek, J, Jedlicka, T, Monincova, M, Kuta-Smatanova, I, Nagata, Y, Damborsky, J, Wilce, M.C.J.
Deposit date:2000-10-26
Release date:2001-10-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Exploring the structure and activity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26: evidence for product- and water-mediated inhibition.
Biochemistry, 41, 2002
1G4H
DownloadVisualize
BU of 1g4h by Molmil
LINB COMPLEXED WITH BUTAN-1-OL
Descriptor: 1,3,4,6-TETRACHLORO-1,4-CYCLOHEXADIENE HYDROLASE, 1-BUTANOL, CALCIUM ION, ...
Authors:Oakley, A.J, Prokop, Z, Bohac, M, Kmunicek, J, Jedlicka, T, Monincova, M, Kuta-Smatanova, I, Nagata, Y, Damborsky, J, Wilce, M.C.J.
Deposit date:2000-10-27
Release date:2001-10-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Exploring the structure and activity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26: evidence for product- and water-mediated inhibition.
Biochemistry, 41, 2002
1G5F
DownloadVisualize
BU of 1g5f by Molmil
STRUCTURE OF LINB COMPLEXED WITH 1,2-DICHLOROETHANE
Descriptor: 1,2-DICHLOROETHANE, 1,3,4,6-TETRACHLORO-1,4-CYCLOHEXADIENE HYDROLASE, CALCIUM ION, ...
Authors:Oakley, A.J, Prokop, Z, Bohac, M, Kmunicek, J, Jedlicka, T, Monincova, M, Kuta-Smatanova, I, Nagata, Y, Damborsky, J, Wilce, M.C.J.
Deposit date:2000-11-01
Release date:2001-11-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Exploring the structure and activity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26: evidence for product- and water-mediated inhibition.
Biochemistry, 41, 2002
5LKA
DownloadVisualize
BU of 5lka by Molmil
Crystal structure of haloalkane dehalogenase LinB 140A+143L+177W+211L mutant (LinB86) from Sphingobium japonicum UT26 at 1.3 A resolution
Descriptor: Haloalkane dehalogenase, THIOCYANATE ION
Authors:Degtjarik, O, Rezacova, P, Iermak, I, Chaloupkova, R, Damborsky, J, Kuta Smatanova, I.
Deposit date:2016-07-21
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.298 Å)
Cite:Engineering a de novo transport tunnel.
Acs Catalysis, 2016

 

123>

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon