Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5O6Y
DownloadVisualize
BU of 5o6y by Molmil
Crystal structure of the Bc1960 peptidoglycan N-acetylglucosamine deacetylase in complex with 4-naphthalen-1-yl-~{N}-oxidanyl-benzamide
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, 4-naphthalen-1-yl-~{N}-oxidanyl-benzamide, ...
Authors:Fadouloglou, V.E, Kotsifaki, D, Kokkinidis, M.
Deposit date:2017-06-07
Release date:2018-06-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Crystal structure of the Bc1960 peptidoglycan N-acetylglucosamine deacetylase in complex with 4-naphthalen-1-yl-~{N}-oxidanyl-benzamide
To Be Published
6G2U
DownloadVisualize
BU of 6g2u by Molmil
Crystal structure of the human glutamate dehydrogenase 2 (hGDH2)
Descriptor: CHLORIDE ION, Glutamate dehydrogenase 2, mitochondrial, ...
Authors:Fadouloglou, V.F, Dimovasili, C, Providaki, M, Kotsifaki, D, Sarrou, I, Plaitakis, A, Zaganas, I, Kokkinidis, M.
Deposit date:2018-03-23
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.934287 Å)
Cite:Crystal structure of glutamate dehydrogenase 2, a positively selected novel human enzyme involved in brain biology and cancer pathophysiology.
J.Neurochem., 2021
7QW6
DownloadVisualize
BU of 7qw6 by Molmil
Adenine-specific DNA methyltransferase M.BseCI complexed with AdoHcy and cognate hemimethylated DNA duplex
Descriptor: Hemimethylated DNA duplex, Modification methylase BseCI, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Mitsikas, D.A, Kouyianou, K, Kotsifaki, D, Providaki, M, Bouriotis, V, Glykos, N.M, Kokkinidis, M.
Deposit date:2022-01-24
Release date:2023-01-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of M.BseCI DNA methyltransferase from Geobacillus stearothermophilus.
To Be Published
7QW8
DownloadVisualize
BU of 7qw8 by Molmil
Adenine-specific DNA methyltransferase M.BseCI
Descriptor: Modification methylase BseCI
Authors:Mitsikas, D.A, Kouyianou, K, Kotsifaki, D, Providaki, M, Bouriotis, V, Glykos, N.M, Kokkinidis, M.
Deposit date:2022-01-24
Release date:2023-01-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of M.BseCI DNA methyltransferase from Geobacillus stearothermophilus.
To Be Published
7QW5
DownloadVisualize
BU of 7qw5 by Molmil
Adenine-specific DNA methyltransferase M.BseCI complexed with AdoHcy and cognate unmethylated DNA duplex
Descriptor: Modification methylase BseCI, S-ADENOSYL-L-HOMOCYSTEINE, Unmethylated DNA duplex
Authors:Mitsikas, D.A, Kouyianou, K, Kotsifaki, D, Providaki, M, Bouriotis, V, Glykos, N.M, Kokkinidis, M.
Deposit date:2022-01-24
Release date:2023-01-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of M.BseCI DNA methyltransferase from Geobacillus stearothermophilus.
To Be Published
7QW7
DownloadVisualize
BU of 7qw7 by Molmil
Adenine-specific DNA methyltransferase M.BseCI complexed with AdoHcy and cognate fully methylated DNA duplex
Descriptor: Fully methylated DNA duplex, Modification methylase BseCI, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Mitsikas, D.A, Kouyianou, K, Kotsifaki, D, Providaki, M, Bouriotis, V, Glykos, N.M, Kokkinidis, M.
Deposit date:2022-01-24
Release date:2023-01-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of M.BseCI DNA methyltransferase from Geobacillus stearothermophilus.
To Be Published
1NI0
DownloadVisualize
BU of 1ni0 by Molmil
Structure of the Y94F mutant of the restriction endonuclease PvuII
Descriptor: Type II restriction enzyme PvuII
Authors:Tucker, P.A, Kokkinidis, M, Nicolaki, S, Kotsifaki, D.
Deposit date:2002-12-20
Release date:2003-02-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Y94F mutant of the restriction endonuclease PvuII
To be Published
1QX8
DownloadVisualize
BU of 1qx8 by Molmil
Crystal structure of a five-residue deletion mutant of the Rop protein
Descriptor: Regulatory protein ROP
Authors:Glykos, N.M, Vlassi, M, Papanikolaou, Y, Kotsifaki, D, Cesareni, G, Kokkinidis, M.
Deposit date:2003-09-04
Release date:2004-09-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Loopless Rop: structure and dynamics of an engineered homotetrameric variant of the repressor of primer protein.
Biochemistry, 45, 2006
4DO2
DownloadVisualize
BU of 4do2 by Molmil
Crystal Structure of the Rop protein mutant D30P/A31G at resolution 1.4 resolution.
Descriptor: Regulatory protein rop
Authors:Amprazi, M, Kapetaniou, E.G, Kokkinidis, M.
Deposit date:2012-02-09
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Structural plasticity of 4-alpha-helical bundles exemplified by the puzzle-like molecular assembly of the Rop protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
4L1G
DownloadVisualize
BU of 4l1g by Molmil
Crystal structure of the Bc1960 peptidoglycan N-acetylglucosamine deacetylase from Bacillus cereus
Descriptor: ACETATE ION, Peptidoglycan N-acetylglucosamine deacetylase, SULFATE ION
Authors:Tsalafouta, A, Fadouloglou, V.E, Kokkinidis, M.
Deposit date:2013-06-03
Release date:2014-06-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.336 Å)
Cite:Unusual alpha-Carbon Hydroxylation of Proline Promotes Active-Site Maturation.
J.Am.Chem.Soc., 139, 2017
1PVU
DownloadVisualize
BU of 1pvu by Molmil
THE CRYSTAL STRUCTURE OF PVUII ENDONUCLEASE REVEALS EXTENSIVE STRUCTURAL HOMOLOGIES TO ECORV
Descriptor: Pvu II
Authors:Vlassi, M, Athanasiadis, A.
Deposit date:1995-03-09
Release date:1995-03-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of PvuII endonuclease reveals extensive structural homologies to EcoRV.
Nat.Struct.Biol., 1, 1994
1H56
DownloadVisualize
BU of 1h56 by Molmil
Structural and biochemical characterization of a new magnesium ion binding site near Tyr94 in the restriction endonuclease PvuII
Descriptor: MAGNESIUM ION, TYPE II RESTRICTION ENZYME PVUII
Authors:Spyrida, A, Matzen, C, Lanio, T, Jeltsch, A, Simoncsits, A, Athanasiadis, A, Scheuring-Vanamee, E, Kokkinidis, M, Pingoud, A.
Deposit date:2001-05-20
Release date:2003-08-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and Biochemical Characterization of a New Mg(2+) Binding Site Near Tyr94 in the Restriction Endonuclease PvuII.
J.Mol.Biol., 331, 2003
1K0Z
DownloadVisualize
BU of 1k0z by Molmil
Crystal Structure of the PvuII endonuclease with Pr3+ and SO4 ions bound in the active site at 2.05A.
Descriptor: PRASEODYMIUM ION, SULFATE ION, Type II restriction enzyme PvuII
Authors:Spyridaki, A, Athanasiadis, A, Matzen, C, Lanio, T, Jeltsch, A, Simoncsits, A, Scheuring-Vanamee, E, Kokkinidis, M, Pingoud, A.
Deposit date:2001-09-21
Release date:2003-06-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:

1RPO
DownloadVisualize
BU of 1rpo by Molmil
RESTORED HEPTAD PATTERN CONTINUITY DOES NOT ALTER THE FOLDING OF A 4-ALPHA-HELICAL BUNDLE
Descriptor: ROP PROTEIN
Authors:Vlassi, M, Kokkinidis, M.
Deposit date:1994-08-25
Release date:1995-02-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Restored heptad pattern continuity does not alter the folding of a four-alpha-helix bundle.
Nat.Struct.Biol., 1, 1994
2IXD
DownloadVisualize
BU of 2ixd by Molmil
Crystal structure of the putative deacetylase BC1534 from Bacillus cereus
Descriptor: ACETATE ION, LMBE-RELATED PROTEIN, ZINC ION
Authors:Fadouloglou, V.E, Bouriotis, V, Kokkinidis, M.
Deposit date:2006-07-07
Release date:2007-07-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Bczbp, a Zinc-Binding Protein from Bacillus Cereus
FEBS J., 274, 2007
1NKD
DownloadVisualize
BU of 1nkd by Molmil
ATOMIC RESOLUTION (1.07 ANGSTROMS) STRUCTURE OF THE ROP MUTANT <2AA>
Descriptor: ROP
Authors:Vlassi, M, Kokkinidis, M.
Deposit date:1997-09-23
Release date:1999-03-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Structural parameters for proteins derived from the atomic resolution (1.09 A) structure of a designed variant of the ColE1 ROP protein.
Acta Crystallogr.,Sect.D, 54, 1998
3KSK
DownloadVisualize
BU of 3ksk by Molmil
Crystal Structure of single chain PvuII
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, ...
Authors:Meramveliotaki, C, Hountas, A, Eliopoulos, E, Kokkinidis, M.
Deposit date:2009-11-23
Release date:2010-04-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structure of single chain PvuII
To be Published
1PD5
DownloadVisualize
BU of 1pd5 by Molmil
Crystal structure of E.coli chloramphenicol acetyltransferase type I at 2.5 Angstrom resolution
Descriptor: Chloramphenicol acetyltransferase
Authors:Roidis, A, Kokkinidis, M.
Deposit date:2003-05-19
Release date:2004-06-01
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of E.coli chloramphenicol acetyltransferase type I at 2.5 Angstrom resolution
To be Published

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon