Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1EEK
DownloadVisualize
BU of 1eek by Molmil
SOLUTION STRUCTURE OF A NONPOLAR, NON HYDROGEN BONDED BASE PAIR SURROGATE IN DNA.
Descriptor: 5'-D(*CP*GP*CP*AP*TP*(DFT)P*GP*TP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*AP*CP*(MBZ)P*AP*TP*GP*CP*G)-3'
Authors:Kool, E.T, Krugh, T.R, Guckian, K.M.
Deposit date:2000-02-01
Release date:2000-02-16
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution Structure of a Nonpolar, Non-Hydrogen-Bonded Base Pair Surrogate in DNA
J.Am.Chem.Soc., 122, 2000
2XHB
DownloadVisualize
BU of 2xhb by Molmil
Crystal structure of DNA polymerase from Thermococcus gorgonarius in complex with hypoxanthine-containing DNA
Descriptor: 5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*A)-3', DNA POLYMERASE, HYPOXANTHINE-CONTAINING DNA, ...
Authors:Killelea, T, Ghosh, S, Tan, S.S, Heslop, P, Firbank, S.J, Kool, E.T, Connolly, B.A.
Deposit date:2010-06-14
Release date:2010-07-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Probing the Interaction of Archaeal DNA Polymerases with Deaminated Bases Using X-Ray Crystallography and Non-Hydrogen Bonding Isosteric Base Analogues.
Biochemistry, 49, 2010
1BW7
DownloadVisualize
BU of 1bw7 by Molmil
SOLUTION STRUCTURE OF A DNA DUPLEX CONTAINING A REPLICABLE DIFLUOROTOLUENE-ADENINE PAIR
Descriptor: DNA (5'-D(*CP*GP*CP*AP*TP*(DFT)P*GP*TP*TP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*AP*AP*CP*AP*AP*TP*GP*CP*G)-3')
Authors:Guckian, K.M, Krugh, T.R, Kool, E.T.
Deposit date:1998-09-30
Release date:1998-10-07
Last modified:2011-12-28
Method:SOLUTION NMR
Cite:Solution structure of a DNA duplex containing a replicable difluorotoluene-adenine pair.
Nat.Struct.Biol., 5, 1998
1FZL
DownloadVisualize
BU of 1fzl by Molmil
DNA WITH PYRENE PAIRED AT ABASIC SITES
Descriptor: 5'-D(*CP*AP*CP*AP*AP*AP*CP*AP*(PYP)P*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*(3DR)P*TP*GP*TP*TP*TP*GP*TP*G)-3'
Authors:Smirnov, S, Matray, T.J, Kool, E.T, de los Santos, C.
Deposit date:2000-10-03
Release date:2000-10-18
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Integrity of duplex structures without hydrogen bonding: DNA with pyrene paired at abasic sites
Nucleic Acids Res., 30, 2002
1FZS
DownloadVisualize
BU of 1fzs by Molmil
DNA WITH PYRENE PAIRED AT ABASIC SITE
Descriptor: 5'-D(*CP*AP*CP*AP*AP*AP*CP*AP*(PYP))-3', 5'-D(*GP*TP*GP*CP*(3DR)P*TP*GP*TP*TP*TP*GP*TP*G)-3'
Authors:Smirnov, S, Matray, T.J, Kool, E.T, de los Santos, C.
Deposit date:2000-10-04
Release date:2000-10-18
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Integrity of duplex structures without hydrogen bonding: DNA with pyrene paired at abasic sites
Nucleic Acids Res., 30, 2002
2MVY
DownloadVisualize
BU of 2mvy by Molmil
Structure and Stability of RNAs Containing N6-Methyl-adenosine
Descriptor: RNA
Authors:Lynch, S.R, Kool, E.T.
Deposit date:2014-10-20
Release date:2015-09-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and thermodynamics of N6-methyladenosine in RNA: a spring-loaded base modification.
J.Am.Chem.Soc., 137, 2015
2MVS
DownloadVisualize
BU of 2mvs by Molmil
N6-Methyladenosine RNA
Descriptor: N-6_Methyl_Adenosine_RNA
Authors:Lynch, S.R, Kool, E.
Deposit date:2014-10-10
Release date:2015-09-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and thermodynamics of N6-methyladenosine in RNA: a spring-loaded base modification.
J.Am.Chem.Soc., 137, 2015
2ICZ
DownloadVisualize
BU of 2icz by Molmil
NMR Structures of the Expanded DNA 10bp xTGxTAxCxGCxAxGT:xACTxGCGxTAxCA
Descriptor: 5'-D(*(XAE)P*CP*TP*(XGA)P*CP*GP*(XTY)P*AP*(XCS)P*A)-3', 5'-D(*(XTY)P*GP*(XTY)P*AP*(XCS)P*(XGA)P*CP*(XAE)P*(XGA)P*T)-3'
Authors:Lynch, S.R.
Deposit date:2006-09-13
Release date:2006-11-21
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Toward a Designed, Functioning Genetic System with Expanded-Size Base Pairs: Solution Structure of the Eight-Base xDNA Double Helix.
J.Am.Chem.Soc., 128, 2006

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon