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2DVY
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BU of 2dvy by Molmil
Crystal structure of restriction endonucleases PabI
Descriptor: Restriction endonuclease PabI
Authors:Miyazono, K, Watanabe, M, Kamo, M, Sawasaki, T, Nagata, K, Endo, Y, Tanokura, M, Kobayashi, I.
Deposit date:2006-08-01
Release date:2007-05-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Novel protein fold discovered in the PabI family of restriction enzymes
Nucleic Acids Res., 35, 2007
6IR4
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BU of 6ir4 by Molmil
Crystal structure of BioU from Synechocystis sp.PCC6803 (apo form)
Descriptor: Slr0355 protein
Authors:Sakaki, K, Oishi, K, Shimizu, T, Tomita, T, Kuzuyama, T, Nishiyama, M.
Deposit date:2018-11-10
Release date:2020-01-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:A suicide enzyme catalyzes multiple reactions for biotin biosynthesis in cyanobacteria.
Nat.Chem.Biol., 16, 2020
6ITD
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BU of 6itd by Molmil
Crystal structure of BioU (K124A) from Synechocystis sp.PCC6803 in complex with the analog of reaction intermediate, 3-(1-aminoethyl)-nonanedioic acid
Descriptor: 3-(1-AMINOETHYL)NONANEDIOIC ACID, Slr0355 protein
Authors:Sakaki, K, Tomita, T, Kuzuyama, T, Nishiyama, M.
Deposit date:2018-11-21
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:A suicide enzyme catalyzes multiple reactions for biotin biosynthesis in cyanobacteria.
Nat.Chem.Biol., 16, 2020
6K36
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BU of 6k36 by Molmil
Crystal structure of BioU from Synechocystis sp.PCC6803 conjugated with DAPA
Descriptor: (8S)-8-azanylnonanoic acid, Slr0355 protein
Authors:Sakaki, K, Tomita, T, Nishiyama, M.
Deposit date:2019-05-16
Release date:2020-02-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A suicide enzyme catalyzes multiple reactions for biotin biosynthesis in cyanobacteria.
Nat.Chem.Biol., 16, 2020
6K37
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BU of 6k37 by Molmil
Crystal structure of BioU (K124A) from Synechocystis sp.PCC6803 in complex with NAD+ and the analog of reaction intermediate, 3-(1-aminoethyl)-nonanedioic acid
Descriptor: (3R)-3-[(1R)-1-azanylethyl]nonanedioic acid, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Slr0355 protein
Authors:Sakaki, K, Tomita, T, Nishiyama, M.
Deposit date:2019-05-16
Release date:2020-02-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A suicide enzyme catalyzes multiple reactions for biotin biosynthesis in cyanobacteria.
Nat.Chem.Biol., 16, 2020
6K38
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BU of 6k38 by Molmil
Crystal structure of BioU (H233A) from Synechocystis sp.PCC6803 conjugated with DAPA
Descriptor: (8S)-8-azanylnonanoic acid, Slr0355 protein
Authors:Sakaki, K, Tomita, T, Nishiyama, M.
Deposit date:2019-05-16
Release date:2020-02-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:A suicide enzyme catalyzes multiple reactions for biotin biosynthesis in cyanobacteria.
Nat.Chem.Biol., 16, 2020
3WAZ
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BU of 3waz by Molmil
Crystal structure of a restriction enzyme PabI in complex with DNA
Descriptor: ADENINE, DNA (5'-D(*GP*CP*AP*TP*AP*GP*CP*TP*GP*TP*(ORP)P*CP*AP*GP*CP*TP*AP*TP*GP*C)-3'), Putative uncharacterized protein
Authors:Miyazono, K, Miyakawa, T, Ito, T, Tanokura, M.
Deposit date:2013-05-10
Release date:2014-01-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:A sequence-specific DNA glycosylase mediates restriction-modification in Pyrococcus abyssi.
Nat Commun, 5, 2014
2D4V
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BU of 2d4v by Molmil
Crystal structure of NAD dependent isocitrate dehydrogenase from Acidithiobacillus thiooxidans
Descriptor: CITRATE ANION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, isocitrate dehydrogenase
Authors:Imada, K, Tamura, T, Namba, K, Inagaki, K.
Deposit date:2005-10-24
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and quantum chemical analysis of NAD+-dependent isocitrate dehydrogenase: hydride transfer and co-factor specificity
Proteins, 70, 2008

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PDB entries from 2024-04-17

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