Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2D73
DownloadVisualize
BU of 2d73 by Molmil
Crystal Structure Analysis of SusB
Descriptor: CALCIUM ION, alpha-glucosidase SusB
Authors:Kitamura, M, Yao, M.
Deposit date:2005-11-15
Release date:2007-02-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional analysis of a glycoside hydrolase family 97 enzyme from Bacteroides thetaiotaomicron.
J.Biol.Chem., 283, 2008
2ZQ0
DownloadVisualize
BU of 2zq0 by Molmil
Crystal structure of SusB complexed with acarbose
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-glucosidase (Alpha-glucosidase SusB), CALCIUM ION
Authors:Yao, M, Tanaka, I, Kitamura, M.
Deposit date:2008-07-31
Release date:2008-10-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional analysis of a glycoside hydrolase family 97 enzyme from Bacteroides thetaiotaomicron.
J.Biol.Chem., 283, 2008
8ITO
DownloadVisualize
BU of 8ito by Molmil
Crystal structure of FeRlp from Desulfovibrio vulgaris (Hildenborough)
Descriptor: FE (III) ION, PHOSPHATE ION, Rubredoxin
Authors:Nakatsuji, T, Ogata, H, Kitamura, M.
Deposit date:2023-03-22
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of FeRlp from Desulfovibrio vulgaris (Hildenborough)
To Be Published
2CVC
DownloadVisualize
BU of 2cvc by Molmil
Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Hildenborough)
Descriptor: HEME C, High-molecular-weight cytochrome c precursor
Authors:Suto, K, Sato, M, Shibata, N, Kitamura, M, Morimoto, Y, Takayama, Y, Ozawa, K, Akutsu, H, Higuchi, Y, Yasuoka, N.
Deposit date:2005-06-02
Release date:2006-06-06
Last modified:2019-10-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of High-Molecular Weight Cytochrome c
To be Published
1FLM
DownloadVisualize
BU of 1flm by Molmil
DIMER OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
Descriptor: FLAVIN MONONUCLEOTIDE, PROTEIN (FMN-BINDING PROTEIN)
Authors:Suto, K, Kawagoe, K, Shibata, N, Morimoto, K, Higuchi, Y, Kitamura, M, Nakaya, T, Yasuoka, N.
Deposit date:1999-03-10
Release date:2000-03-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:How do the x-ray structure and the NMR structure of FMN-binding protein differ?
Acta Crystallogr.,Sect.D, 56, 2000
5B37
DownloadVisualize
BU of 5b37 by Molmil
Crystal structure of L-tryptophan dehydrogenase from Nostoc punctiforme
Descriptor: Tryptophan dehydrogenase
Authors:Wakamatsu, T, Sakuraba, H, Kitamura, M, Hakumai, Y, Ohnishi, K, Ashiuchi, M, Ohshima, T.
Deposit date:2016-02-11
Release date:2016-11-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Insights into l-Tryptophan Dehydrogenase from a Photoautotrophic Cyanobacterium, Nostoc punctiforme.
Appl. Environ. Microbiol., 83, 2017
7EG5
DownloadVisualize
BU of 7eg5 by Molmil
FMN-bound form of YviC from Lactococcus lactis subsp. lactis Il1403
Descriptor: FLAVIN MONONUCLEOTIDE, FMN-binding protein
Authors:Sugiura, N, Nakanishi, T, Kitamura, M.
Deposit date:2021-03-24
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:FMN-bound form of YviC from Lactococcus lactis subsp. lactis Il1403
To Be Published
1WE5
DownloadVisualize
BU of 1we5 by Molmil
Crystal Structure of Alpha-Xylosidase from Escherichia coli
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Putative family 31 glucosidase yicI
Authors:Ose, T, Kitamura, M, Okuyama, M, Mori, H, Kimura, A, Watanabe, N, Yao, M, Tanaka, I.
Deposit date:2004-05-24
Release date:2005-02-15
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Alpha-Xylosidase from Escherichia coli
TO BE PUBLISHED
5B3K
DownloadVisualize
BU of 5b3k by Molmil
C101A mutant of Flavodoxin from Pseudomonas aeruginosa
Descriptor: SULFATE ION, Uncharacterized protein PA3435
Authors:Okada, D, Nakanishi, T, Kitamura, M.
Deposit date:2016-03-03
Release date:2017-03-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:C101A mutant of Flavodoxin from Pseudomonas aeruginosa
To Be Published
5B3L
DownloadVisualize
BU of 5b3l by Molmil
C101S mutant of Flavodoxin from Pseudomonas aeruginosa
Descriptor: SULFATE ION, Uncharacterized protein PA3435
Authors:Okada, D, Nakanishi, T, Kitamura, M.
Deposit date:2016-03-04
Release date:2017-03-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:C101S mutant of Flavodoxin from Pseudomonas aeruginosa
To Be Published
3W8Q
DownloadVisualize
BU of 3w8q by Molmil
Structure of the Human Mitogen-Activated Protein Kinase Kinase 1 (MEK1)
Descriptor: Dual specificity mitogen-activated protein kinase kinase 1, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Nakae, S, Kitamura, M, Shirai, T, Tada, T.
Deposit date:2013-03-20
Release date:2014-03-26
Last modified:2021-12-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of mitogen-activated protein kinase kinase 1 in the DFG-out conformation.
Acta Crystallogr.,Sect.F, 77, 2021
2E84
DownloadVisualize
BU of 2e84 by Molmil
Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Miyazaki F) in the presence of zinc ion
Descriptor: High-molecular-weight cytochrome c, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ...
Authors:Shibata, N, Suto, K, Sato, M, Morimoto, Y, Kitamura, M, Higuchi, Y.
Deposit date:2007-01-17
Release date:2008-01-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Miyazaki F)
To be Published
3A24
DownloadVisualize
BU of 3a24 by Molmil
Crystal structure of BT1871 retaining glycosidase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, alpha-galactosidase
Authors:Okuyama, M, Kitamura, M, Hondoh, H, Tanaka, I, Yao, M.
Deposit date:2009-04-28
Release date:2009-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Catalytic mechanism of retaining alpha-galactosidase belonging to glycoside hydrolase family 97.
J.Mol.Biol., 392, 2009
3VY5
DownloadVisualize
BU of 3vy5 by Molmil
N33Q mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, FMN-binding protein
Authors:Takagi, R, Nakanishi, T, Kitamura, M.
Deposit date:2012-09-21
Release date:2013-09-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of N33Q mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
To be Published
3VY2
DownloadVisualize
BU of 3vy2 by Molmil
N33D mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Descriptor: FLAVIN MONONUCLEOTIDE, FMN-binding protein
Authors:Takagi, R, Nakanishi, T, Kitamura, M.
Deposit date:2012-09-21
Release date:2013-09-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of N33D mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
To be Published
3VQT
DownloadVisualize
BU of 3vqt by Molmil
Crystal structure analysis of the translation factor RF3
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Peptide chain release factor 3
Authors:Kihira, K, Shomura, Y, Shibata, N, Kitamura, M, Higuchi, Y.
Deposit date:2012-03-30
Release date:2012-09-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure analysis of the translation factor RF3 (release factor 3)
Febs Lett., 586, 2012
3VR1
DownloadVisualize
BU of 3vr1 by Molmil
Crystal structure analysis of the translation factor RF3
Descriptor: GUANOSINE-5',3'-TETRAPHOSPHATE, Peptide chain release factor 3
Authors:Kihira, K, Shomura, Y, Shibata, N, Kitamura, M, Higuchi, Y.
Deposit date:2012-04-03
Release date:2012-09-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure analysis of the translation factor RF3 (release factor 3)
Febs Lett., 586, 2012
3VYA
DownloadVisualize
BU of 3vya by Molmil
W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Descriptor: FLAVIN MONONUCLEOTIDE, FMN-binding protein
Authors:Takagi, R, Nakanishi, T, Kitamura, M.
Deposit date:2012-09-22
Release date:2013-09-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
To be Published
3A6R
DownloadVisualize
BU of 3a6r by Molmil
E13Q mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, FMN-binding protein
Authors:Nakanishi, T, Haruyama, Y, Inoue, H, Kitamura, M.
Deposit date:2009-09-08
Release date:2010-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Effects of the disappearance of one charge on ultrafast fluorescence dynamics of the FMN binding protein.
J.Phys.Chem.B, 114, 2010
3A6Q
DownloadVisualize
BU of 3a6q by Molmil
E13T mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, FMN-binding protein
Authors:Nakanishi, T, Haruyama, Y, Inoue, H, Kitamura, M.
Deposit date:2009-09-08
Release date:2010-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Effects of the disappearance of one charge on ultrafast fluorescence dynamics of the FMN binding protein.
J.Phys.Chem.B, 114, 2010
3AMF
DownloadVisualize
BU of 3amf by Molmil
E13R mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, FMN-binding protein
Authors:Sato, S, Nakanishi, T, Inoue, H, Kitamura, M.
Deposit date:2010-08-19
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of E13R mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
To be Published
3AWH
DownloadVisualize
BU of 3awh by Molmil
E13K mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, FMN-binding protein
Authors:Sato, S, Nakanishi, T, Inoue, H, Kitamura, M.
Deposit date:2011-03-22
Release date:2012-04-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of E13K mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
To be Published
1WLK
DownloadVisualize
BU of 1wlk by Molmil
L122E mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Descriptor: FLAVIN MONONUCLEOTIDE, FMN-binding protein
Authors:Shibata, N, Higuchi, Y.
Deposit date:2004-06-28
Release date:2005-07-19
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Determination of the role of the Carboxyl-terminal leucine-122 in FMN-binding protein by mutational and structural analysis.
J.Biochem., 141, 2007
1WLI
DownloadVisualize
BU of 1wli by Molmil
L122Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Descriptor: FLAVIN MONONUCLEOTIDE, FMN-binding protein
Authors:Shibata, N, Higuchi, Y.
Deposit date:2004-06-28
Release date:2005-07-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Determination of the role of the Carboxyl-terminal leucine-122 in FMN-binding protein by mutational and structural analysis.
J.Biochem., 141, 2007
3A20
DownloadVisualize
BU of 3a20 by Molmil
L122K mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Descriptor: FLAVIN MONONUCLEOTIDE, FMN-binding protein
Authors:Shibata, N, Higuchi, Y.
Deposit date:2009-04-27
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Determination of the role of the Carboxyl-terminal leucine-122 in FMN-binding protein by mutational and structural analysis
J.Biochem., 141, 2007

 

12>

218196

PDB entries from 2024-04-10

PDB statisticsPDBj update infoContact PDBjnumon