Author results

1GCM
  • Download 1gcm
  • View 1gcm
Molmil generated image of 1gcm
GCN4 LEUCINE ZIPPER CORE MUTANT P-LI
Descriptor:GCN4P-II
Authors:Harbury, P.B., Kim, P.S., Alber, T.
Deposit date:1995-04-25
Release date:1996-01-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of an isoleucine-zipper trimer.
Nature, 371, 1994
1GCL
  • Download 1gcl
  • View 1gcl
Molmil generated image of 1gcl
GCN4 LEUCINE ZIPPER CORE MUTANT P-LI
Descriptor:GCN4
Authors:Harbury, P.B., Zhang, T., Kim, P.S., Alber, T.
Deposit date:1993-10-20
Release date:1995-06-03
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants.
Science, 262, 1993
1IJ1
  • Download 1ij1
  • View 1ij1
Molmil generated image of 1ij1
GCN4-PVLT COILED-COIL TRIMER WITH THREONINE AT THE D(12) POSITION
Descriptor:GENERAL CONTROL PROTEIN GCN4, ZINC ION
Authors:Akey, D.L., Malashkevich, V.N., Kim, P.S.
Deposit date:2001-04-24
Release date:2001-08-08
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Buried polar residues in coiled-coil interfaces.
Biochemistry, 40, 2001
1JEK
  • Download 1jek
  • View 1jek
Molmil generated image of 1jek
VISNA TM CORE STRUCTURE
Descriptor:ENV POLYPROTEIN
Authors:Malashkevich, V.N., Singh, M., Kim, P.S.
Deposit date:2001-06-18
Release date:2001-07-25
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The trimer-of-hairpins motif in membrane fusion: Visna virus.
Proc.Natl.Acad.Sci.USA, 98, 2001
1TGG
  • Download 1tgg
  • View 1tgg
Molmil generated image of 1tgg
RH3 DESIGNED RIGHT-HANDED COILED COIL TRIMER
Descriptor:right-handed coiled coil trimer, NICKEL (II) ION, CHLORIDE ION
Authors:Plecs, J.J., Harbury, P.B., Kim, P.S., Alber, T.
Deposit date:2004-05-28
Release date:2004-10-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural test of the parameterized-backbone method for protein design
J.Mol.Biol., 342, 2004
2EBO
  • Download 2ebo
  • View 2ebo
Molmil generated image of 2ebo
CORE STRUCTURE OF GP2 FROM EBOLA VIRUS
Descriptor:EBOLA VIRUS ENVELOPE GLYCOPROTEIN, CHLORIDE ION
Authors:Malashkevich, V.N., Schneider, B.J., Mcnally, M.L., Milhollen, M.A., Pang, J.X., Kim, P.S.
Deposit date:1998-12-24
Release date:1999-05-18
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Core structure of the envelope glycoprotein GP2 from Ebola virus at 1.9-A resolution.
Proc.Natl.Acad.Sci.USA, 96, 1999
2Q3I
  • Download 2q3i
  • View 2q3i
Molmil generated image of 2q3i
CRYSTAL STRUCTURE OF THE D10-P3/IQN17 COMPLEX: A D-PEPTIDE INHIBITOR OF HIV-1 ENTRY BOUND TO THE GP41 COILED-COIL POCKET
Descriptor:Fusion protein between the Coiled-Coil pocket of HIV GP41 and gcn4-PIQI, D-peptide, CHLORIDE ION
Authors:Malashkevich, V.N., Eckert, D.M., Hong, L.H., Carr, P.A., Kim, P.S.
Deposit date:2007-05-30
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Inhibiting HIV Entry: Discovery of D-Peptide Inhibitors that Target the Gp41 Coiled-Coil Pocket
Cell(Cambridge,Mass.), 99, 1999
2Q5U
  • Download 2q5u
  • View 2q5u
Molmil generated image of 2q5u
CRYSTAL STRUCTURE OF IQN17
Descriptor:Fusion protein between yeast variant GCN4 and HIVgp41, CHLORIDE ION
Authors:Malashkevich, V.N., Eckert, D.M., Hong, L.H., Kim, P.S.
Deposit date:2007-06-01
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Inhibiting HIV Entry: Discovery of D-Peptide Inhibitors that Target the Gp41 Coiled-Coil Pocket
Cell(Cambridge,Mass.), 99, 1999
2Q7C
  • Download 2q7c
  • View 2q7c
Molmil generated image of 2q7c
CRYSTAL STRUCTURE OF IQN17
Descriptor:fusion protein between yeast variant GCN4 and HIVgp41, CHLORIDE ION
Authors:Malashkevich, V.N., Eckert, D.M., Hong, L.H., Kim, P.S.
Deposit date:2007-06-06
Release date:2007-06-19
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inhibiting HIV Entry: Discovery of D-Peptide Inhibitors that Target the Gp41 Coiled-Coil Pocket
Cell(Cambridge,Mass.), 99, 1999
2ZTA
  • Download 2zta
  • View 2zta
Molmil generated image of 2zta
X-RAY STRUCTURE OF THE GCN4 LEUCINE ZIPPER, A TWO-STRANDED, PARALLEL COILED COIL
Descriptor:GCN4 LEUCINE ZIPPER
Authors:O'Shea, E.K., Klemm, J.D., Kim, P.S., Alber, T.
Deposit date:1991-07-05
Release date:1992-10-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil.
Science, 254, 1991
1AJJ
  • Download 1ajj
  • View 1ajj
Molmil generated image of 1ajj
LDL RECEPTOR LIGAND-BINDING MODULE 5, CALCIUM-COORDINATING
Descriptor:LOW-DENSITY LIPOPROTEIN RECEPTOR, SULFATE ION, CALCIUM ION
Authors:Fass, D., Blacklow, S.C., Kim, P.S., Berger, J.M.
Deposit date:1997-05-04
Release date:1997-07-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular basis of familial hypercholesterolaemia from structure of LDL receptor module.
Nature, 388, 1997
1RH4
  • Download 1rh4
  • View 1rh4
Molmil generated image of 1rh4
RH4 DESIGNED RIGHT-HANDED COILED COIL TETRAMER
Descriptor:RIGHT-HANDED COILED COIL TETRAMER, ISOPROPYL ALCOHOL
Authors:Harbury, P.B., Plecs, J.J., Tidor, B., Alber, T., Kim, P.S.
Deposit date:1998-10-07
Release date:1998-12-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High-resolution protein design with backbone freedom.
Science, 282, 1998
2SIV
  • Download 2siv
  • View 2siv
Molmil generated image of 2siv
SIV GP41 CORE STRUCTURE
Descriptor:SIV GP41 GLYCOPROTEIN
Authors:Malashkevich, V.N., Chan, D.C., Chutkowski, C.T., Kim, P.S.
Deposit date:1998-06-17
Release date:1998-08-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the simian immunodeficiency virus (SIV) gp41 core: conserved helical interactions underlie the broad inhibitory activity of gp41 peptides.
Proc.Natl.Acad.Sci.USA, 95, 1998
1AIK
  • Download 1aik
  • View 1aik
Molmil generated image of 1aik
HIV GP41 CORE STRUCTURE
Descriptor:HIV-1 GP41 GLYCOPROTEIN
Authors:Chan, D.C., Fass, D., Berger, J.M., Kim, P.S.
Deposit date:1997-04-20
Release date:1997-06-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Core structure of gp41 from the HIV envelope glycoprotein.
Cell(Cambridge,Mass.), 89, 1997
1AOL
  • Download 1aol
  • View 1aol
Molmil generated image of 1aol
FRIEND MURINE LEUKEMIA VIRUS RECEPTOR-BINDING DOMAIN
Descriptor:GP70, N-ACETYL-D-GLUCOSAMINE, ZINC ION
Authors:Fass, D., Davey, R.A., Hamson, C.A., Kim, P.S., Cunningham, J.M., Berger, J.M.
Deposit date:1997-07-08
Release date:1997-10-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a murine leukemia virus receptor-binding glycoprotein at 2.0 angstrom resolution.
Science, 277, 1997
1CZQ
  • Download 1czq
  • View 1czq
Molmil generated image of 1czq
CRYSTAL STRUCTURE OF THE D10-P1/IQN17 COMPLEX: A D-PEPTIDE INHIBITOR OF HIV-1 ENTRY BOUND TO THE GP41 COILED-COIL POCKET.
Descriptor:FUSION PROTEIN BETWEEN THE HYDROPHOBIC POCKET OF HIV GP41 AND GCN4-PIQI, D-PEPTIDE INHIBITOR, CHLORIDE ION
Authors:Eckert, D.M., Malashkevich, V.N., Hong, L.H., Carr, P.A., Kim, P.S.
Deposit date:1999-09-06
Release date:1999-10-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Inhibiting HIV-1 entry: discovery of D-peptide inhibitors that target the gp41 coiled-coil pocket.
Cell(Cambridge,Mass.), 99, 1999
1G2C
  • Download 1g2c
  • View 1g2c
Molmil generated image of 1g2c
HUMAN RESPIRATORY SYNCYTIAL VIRUS FUSION PROTEIN CORE
Descriptor:FUSION PROTEIN (F)
Authors:Zhao, X., Singh, M., Malashkevich, V.N., Kim, P.S.
Deposit date:2000-10-18
Release date:2001-01-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural characterization of the human respiratory syncytial virus fusion protein core.
Proc.Natl.Acad.Sci.USA, 97, 2000
1GZL
  • Download 1gzl
  • View 1gzl
Molmil generated image of 1gzl
CRYSTAL STRUCTURE OF C14LINKMID/IQN17: A CROSS-LINKED INHIBITOR OF HIV-1 ENTRY BOUND TO THE GP41 HYDROPHOBIC POCKET
Descriptor:FUSION PROTEIN BETWEEN THE HYDROPHOBIC POCKET OF HIV GP41 AND GENERAL CONTROL PROTEIN GCN4-PIQI, ENVELOPE GLYCOPROTEIN GP41, CHLORIDE ION, ...
Authors:Sia, S.K., Carr, P.A., Cochran, A.G., Malashkevich, V.M., Kim, P.S.
Deposit date:2002-05-23
Release date:2002-10-10
Last modified:2015-12-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Short Constrained Peptides that Inhibit HIV-1 Entry
Proc.Natl.Acad.Sci.USA, 99, 2002
1IJ0
  • Download 1ij0
  • View 1ij0
Molmil generated image of 1ij0
COILED COIL TRIMER GCN4-PVLS SER AT BURIED D POSITION
Descriptor:GENERAL CONTROL PROTEIN GCN4, ZINC ION
Authors:Akey, D.L., Malashkevich, V.N., Kim, P.S.
Deposit date:2001-04-24
Release date:2001-08-08
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Buried polar residues in coiled-coil interfaces.
Biochemistry, 40, 2001
1IJ2
  • Download 1ij2
  • View 1ij2
Molmil generated image of 1ij2
GCN4-PVTL COILED-COIL TRIMER WITH THREONINE AT THE A(16) POSITION
Descriptor:GENERAL CONTROL PROTEIN GCN4, CADMIUM ION
Authors:Akey, D.L., Malashkevich, V.N., Kim, P.S.
Deposit date:2001-04-24
Release date:2001-08-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Buried polar residues in coiled-coil interfaces.
Biochemistry, 40, 2001
1IJ3
  • Download 1ij3
  • View 1ij3
Molmil generated image of 1ij3
GCN4-PVSL COILED-COIL TRIMER WITH SERINE AT THE A(16) POSITION
Descriptor:general control protein GCN4
Authors:Akey, D.L., Malashkevich, V.N., Kim, P.S.
Deposit date:2001-04-24
Release date:2001-08-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Buried polar residues in coiled-coil interfaces.
Biochemistry, 40, 2001
1K1F
  • Download 1k1f
  • View 1k1f
Molmil generated image of 1k1f
STRUCTURE OF THE BCR-ABL ONCOPROTEIN OLIGOMERIZATION DOMAIN
Descriptor:BREAKPOINT CLUSTER REGION PROTEIN
Authors:Zhao, X., Ghaffari, S., Lodish, H., Malashkevich, V.N., Kim, P.S.
Deposit date:2001-09-25
Release date:2002-02-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the Bcr-Abl oncoprotein oligomerization domain.
Nat.Struct.Biol., 9, 2002
1KD8
  • Download 1kd8
  • View 1kd8
Molmil generated image of 1kd8
X-RAY STRUCTURE OF THE COILED COIL GCN4 ACID BASE HETERODIMER ACID-D12IA16V BASE-D12LA16L
Descriptor:GCN4 ACID BASE HETERODIMER ACID-d12Ia16V, GCN4 ACID BASE HETERODIMER BASE-d12La16L
Authors:Keating, A.E., Malashkevich, V.N., Tidor, B., Kim, P.S.
Deposit date:2001-11-12
Release date:2001-11-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils.
Proc.Natl.Acad.Sci.USA, 98, 2001
1KD9
  • Download 1kd9
  • View 1kd9
Molmil generated image of 1kd9
X-RAY STRUCTURE OF THE COILED COIL GCN4 ACID BASE HETERODIMER ACID-D12LA16L BASE-D12LA16L
Descriptor:GCN4 ACID BASE HETERODIMER ACID-d12La16L, GCN4 ACID BASE HETERODIMER BASE-d12La16L
Authors:Keating, A.E., Malashkevich, V.N., Tidor, B., Kim, P.S.
Deposit date:2001-11-12
Release date:2001-11-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils.
Proc.Natl.Acad.Sci.USA, 98, 2001
1KDD
  • Download 1kdd
  • View 1kdd
Molmil generated image of 1kdd
X-RAY STRUCTURE OF THE COILED COIL GCN4 ACID BASE HETERODIMER ACID-D12LA16I BASE-D12LA16L
Descriptor:GCN4 ACID BASE HETERODIMER BASE-d12La16L, GCN4 ACID BASE HETERODIMER ACID-d12La16I
Authors:Keating, A.E., Malashkevich, V.N., Tidor, B., Kim, P.S.
Deposit date:2001-11-12
Release date:2001-11-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils.
Proc.Natl.Acad.Sci.USA, 98, 2001
<12>