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1WR6
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CRYSTAL STRUCTURE OF GGA3 GAT DOMAIN IN COMPLEX WITH UBIQUITIN
Descriptor:ADP-ribosylation factor binding protein GGA3, ubiquitin
Authors:Kawasaki, M., Shiba, T., Shiba, Y., Yamaguchi, Y., Matsugaki, N., Igarashi, N., Suzuki, M., Kato, R., Kato, K., Nakayama, K., Wakatsuki, S.
Deposit date:2004-10-12
Release date:2005-06-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular mechanism of ubiquitin recognition by GGA3 GAT domain.
Genes Cells, 10, 2005
1IO6
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GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 (GRB2) C-TERMINAL SH3 DOMAIN COMPLEXED WITH A LIGAND PEPTIDE (NMR, MINIMIZED MEAN STRUCTURE)
Descriptor:GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2, A LIGAND PEPTIDE
Authors:Kawasaki, M., Ogura, K., Hatanaka, H., Inagaki, F.
Deposit date:2001-01-25
Release date:2001-02-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution Structure of the C-Terminal SH3 Domain of Grb2 Complexed with a Ligand Peptide: A Ligand Exchange Model of the SH3 Domain
To be Published
1IU1
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CRYSTAL STRUCTURE OF HUMAN GAMMA1-ADAPTIN EAR DOMAIN
Descriptor:gamma1-adaptin
Authors:Nogi, T., Shiba, Y., Kawasaki, M., Shiba, T., Matsugaki, N., Igarashi, N., Suzuki, M., Kato, R., Takatsu, H., Nakayama, K., Wakatsuki, S.
Deposit date:2002-02-19
Release date:2002-07-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the accessory protein recruitment by the gamma-adaptin ear domain.
Nat.Struct.Biol., 9, 2002
1J2J
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CRYSTAL STRUCTURE OF GGA1 GAT N-TERMINAL REGION IN COMPLEX WITH ARF1 GTP FORM
Descriptor:ADP-ribosylation factor 1, ADP-ribosylation factor binding protein GGA1, MAGNESIUM ION, ...
Authors:Shiba, T., Kawasaki, M., Takatsu, H., Nogi, T., Matsugaki, N., Igarashi, N., Suzuki, M., Kato, R., Nakayama, K., Wakatsuki, S.
Deposit date:2003-01-05
Release date:2003-05-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular mechanism of membrane recruitment of GGA by ARF in lysosomal protein transport
NAT.STRUCT.BIOL., 10, 2003
1JWF
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CRYSTAL STRUCTURE OF HUMAN GGA1 VHS DOMAIN.
Descriptor:ADP-ribosylation factor binding protein GGA1
Authors:Shiba, T., Takatsu, H., Nogi, T., Matsugaki, N., Kawasaki, M., Igarashi, N., Suzuki, M., Kato, R., Earnest, T., Nakayama, K., Wakatsuki, S.
Deposit date:2001-09-04
Release date:2002-03-06
Last modified:2018-06-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for recognition of acidic-cluster dileucine sequence by GGA1.
Nature, 415, 2002
1JWG
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VHS DOMAIN OF HUMAN GGA1 COMPLEXED WITH CATION-INDEPENDENT M6PR C-TERMINAL PEPTIDE
Descriptor:ADP-ribosylation factor binding protein GGA1, Cation-independent mannose-6-phosphate receptor, IODIDE ION
Authors:Shiba, T., Takatsu, H., Nogi, T., Matsugaki, N., Kawasaki, M., Igarashi, N., Suzuki, M., Kato, R., Earnest, T., Nakayama, K., Wakatsuki, S.
Deposit date:2001-09-04
Release date:2002-03-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for recognition of acidic-cluster dileucine sequence by GGA1.
Nature, 415, 2002
1O3X
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CRYSTAL STRUCTURE OF HUMAN GGA1 GAT DOMAIN
Descriptor:ADP-ribosylation factor binding protein GGA1
Authors:Shiba, T., Kawasaki, M., Takatsu, H., Nogi, T., Matsugaki, N., Igarashi, N., Suzuki, M., Kato, R., Nakayama, K., Wakatsuki, S.
Deposit date:2003-05-08
Release date:2003-05-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular Mechanism of Membrane Recruitment of Gga by Arf in Lysosomal Protein Transport
Nat.Struct.Biol., 10, 2003
1O3Y
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CRYSTAL STRUCTURE OF MOUSE ARF1 (DELTA17-Q71L), GTP FORM
Descriptor:ADP-ribosylation factor 1, MAGNESIUM ION, GUANOSINE-5'-TRIPHOSPHATE
Authors:Shiba, T., Kawasaki, M., Takatsu, H., Nogi, T., Matsugaki, N., Igarashi, N., Suzuki, M., Kato, R., Nakayama, K., Wakatsuki, S.
Deposit date:2003-05-08
Release date:2003-05-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular mechanism of membrane recruitment of GGA by ARF in lysosomal protein transport
Nat.Struct.Biol., 10, 2003
1UJJ
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VHS DOMAIN OF HUMAN GGA1 COMPLEXED WITH C-TERMINAL PEPTIDE FROM BACE
Descriptor:ADP-ribosylation factor binding protein GGA1, C-terminal peptide from Beta-secretase
Authors:Shiba, T., Kametaka, S., Kawasaki, M., Shibata, M., Waguri, S., Uchiyama, Y., Wakatsuki, S.
Deposit date:2003-08-05
Release date:2004-05-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into the Phosphoregulation of beta-Secretase Sorting Signal by the VHS Domain of GGA1
TRAFFIC, 5, 2004
1UJK
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VHS DOMAIN OF HUMAN GGA1 COMPLEXED WITH C-TERMINAL PHOSPHOPEPTIDE FROM BACE
Descriptor:ADP-ribosylation factor binding protein GGA1, C-terminal peptide from Beta-secretase, IODIDE ION
Authors:Shiba, T., Kametaka, S., Kawasaki, M., Shibata, M., Waguri, S., Uchiyama, Y., Wakatsuki, S.
Deposit date:2003-08-05
Release date:2004-05-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into the Phosphoregulation of beta-Secretase Sorting Signal by the VHS Domain of GGA1
TRAFFIC, 5, 2004
1WRD
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CRYSTAL STRUCTURE OF TOM1 GAT DOMAIN IN COMPLEX WITH UBIQUITIN
Descriptor:Target of Myb protein 1, Ubiquitin
Authors:Akutsu, M., Kawasaki, M., Katoh, Y., Shiba, T., Yamaguchi, Y., Kato, R., Kato, K., Nakayama, K., Wakatsuki, S.
Deposit date:2004-10-14
Release date:2005-10-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for recognition of ubiquitinated cargo by Tom1-GAT domain.
Febs Lett., 579, 2005
2DWX
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CO-CRYSTAL STRUCTURE ANALYSIS OF GGA1-GAE WITH THE WNSF MOTIF
Descriptor:ADP-ribosylation factor-binding protein GGA1, hinge peptide from ADP-ribosylation factor binding protein GGA1
Authors:Inoue, M., Shiba, T., Yamada, Y., Ihara, K., Kawasaki, M., Kato, R., Nakayama, K., Wakatsuki, S.
Deposit date:2006-08-21
Release date:2007-04-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Molecular Basis for Autoregulatory Interaction Between GAE Domain and Hinge Region of GGA1
Traffic, 8, 2007
2DWY
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CRYSTAL STRUCTURE ANALYSIS OF GGA1-GAE
Descriptor:ADP-RIBOSYLATION FACTOR BINDING PROTEIN GGA1
Authors:Inoue, M., Shiba, T., Yamada, Y., Ihara, K., Kawasaki, M., Kato, R., Nakayama, K., Wakatsuki, S.
Deposit date:2006-08-21
Release date:2007-04-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular Basis for Autoregulatory Interaction Between GAE Domain and Hinge Region of GGA1
Traffic, 8, 2007
2IEY
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CRYSTAL STRUCTURE OF MOUSE RAB27B BOUND TO GDP IN HEXAGONAL SPACE GROUP
Descriptor:Ras-related protein Rab-27B, GUANOSINE-5'-DIPHOSPHATE
Authors:Chavas, L.M.G., Torii, S., Kamikubo, H., Kawasaki, M., Ihara, K., Kato, R., Kataoka, M., Izumi, T., Wakatsuki, S.
Deposit date:2006-09-19
Release date:2007-05-01
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Structure of the small GTPase Rab27b shows an unexpected swapped dimer
Acta Crystallogr.,Sect.D, 63, 2007
2IEZ
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CRYSTAL STRUCTURE OF MOUSE RAB27B BOUND TO GDP IN MONOCLINIC SPACE GROUP
Descriptor:Ras-related protein Rab-27B, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE
Authors:Chavas, L.M.G., Torii, S., Kamikubo, H., Kawasaki, M., Ihara, K., Kato, R., Kataoka, M., Izumi, T., Wakatsuki, S.
Deposit date:2006-09-19
Release date:2007-05-01
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the small GTPase Rab27b shows an unexpected swapped dimer
Acta Crystallogr.,Sect.D, 63, 2007
2IF0
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CRYSTAL STRUCTURE OF MOUSE RAB27B BOUND TO GDP IN MONOCLINIC SPACE GROUP
Descriptor:Ras-related protein Rab-27B, MAGNESIUM ION, GUANOSINE-5'-DIPHOSPHATE
Authors:Chavas, L.M.G., Torii, S., Kamikubo, H., Kawasaki, M., Ihara, K., Kato, R., Kataoka, M., Izumi, T., Wakatsuki, S.
Deposit date:2006-09-19
Release date:2007-05-01
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the small GTPase Rab27b shows an unexpected swapped dimer
Acta Crystallogr.,Sect.D, 63, 2007
2ZAM
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CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B APO-FORM
Descriptor:Vacuolar protein sorting-associating protein 4B
Authors:Inoue, M., Kawasaki, M., Kamikubo, H., Kataoka, M., Kato, R., Yoshimori, T., Wakatsuki, S.
Deposit date:2007-10-08
Release date:2008-10-07
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Nucleotide-dependent conformational changes and assembly of the AAA ATPase SKD1/VPS4B
Traffic, 9, 2008
2ZAN
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CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B ATP-FORM
Descriptor:Vacuolar protein sorting-associating protein 4B, MAGNESIUM ION, ADENOSINE-5'-TRIPHOSPHATE
Authors:Inoue, M., Kawasaki, M., Kamikubo, H., Kataoka, M., Kato, R., Yoshimori, T., Wakatsuki, S.
Deposit date:2007-10-08
Release date:2008-10-07
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Nucleotide-dependent conformational changes and assembly of the AAA ATPase SKD1/VPS4B
Traffic, 9, 2008
2ZAO
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CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B ADP-FORM
Descriptor:Vacuolar protein sorting-associating protein 4B, ADENOSINE-5'-DIPHOSPHATE
Authors:Inoue, M., Kawasaki, M., Kamikubo, H., Kataoka, M., Kato, R., Yoshimori, T., Wakatsuki, S.
Deposit date:2007-10-08
Release date:2008-10-07
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Nucleotide-dependent conformational changes and assembly of the AAA ATPase SKD1/VPS4B
Traffic, 9, 2008
2ZN8
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CRYSTAL STRUCTURE OF ZN2+-BOUND FORM OF ALG-2
Descriptor:Programmed cell death protein 6, ZINC ION, SODIUM ION
Authors:Suzuki, H., Kawasaki, M., Inuzuka, T., Kakiuchi, T., Shibata, H., Wakatsuki, S., Maki, M.
Deposit date:2008-04-22
Release date:2008-09-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism
Structure, 16, 2008
2ZN9
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CRYSTAL STRUCTURE OF CA2+-BOUND FORM OF DES3-20ALG-2
Descriptor:Programmed cell death protein 6, CALCIUM ION, NONAETHYLENE GLYCOL, ...
Authors:Suzuki, H., Kawasaki, M., Inuzuka, T., Kakiuchi, T., Shibata, H., Wakatsuki, S., Maki, M.
Deposit date:2008-04-22
Release date:2008-09-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism
Structure, 16, 2008
2ZND
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CRYSTAL STRUCTURE OF CA2+-FREE FORM OF DES3-20ALG-2
Descriptor:Programmed cell death protein 6, (4R)-2-METHYLPENTANE-2,4-DIOL, PHOSPHATE ION, ...
Authors:Suzuki, H., Kawasaki, M., Inuzuka, T., Kakiuchi, T., Shibata, H., Wakatsuki, S., Maki, M.
Deposit date:2008-04-22
Release date:2008-09-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism
Structure, 16, 2008
2ZNE
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CRYSTAL STRUCTURE OF ZN2+-BOUND FORM OF DES3-23ALG-2 COMPLEXED WITH ALIX ABS PEPTIDE
Descriptor:Programmed cell death protein 6, 16-meric peptide from Programmed cell death 6-interacting protein, ZINC ION, ...
Authors:Suzuki, H., Kawasaki, M., Inuzuka, T., Kakiuchi, T., Shibata, H., Wakatsuki, S., Maki, M.
Deposit date:2008-04-22
Release date:2008-09-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism
Structure, 16, 2008
2ZRS
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CRYSTAL STRUCTURE OF CA2+-BOUND FORM OF DES3-23ALG-2
Descriptor:Programmed cell death protein 6, CALCIUM ION
Authors:Suzuki, H., Kawasaki, M., Kakiuchi, T., Shibata, H., Wakatsuki, S., Maki, M.
Deposit date:2008-09-01
Release date:2008-11-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystallization and X-ray diffraction analysis of N-terminally truncated human ALG-2
ACTA CRYSTALLOGR.,SECT.F, 64, 2008
2ZRT
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CRYSTAL STRUCTURE OF ZN2+-BOUND FORM OF DES3-23ALG-2
Descriptor:Programmed cell death protein 6, ZINC ION
Authors:Suzuki, H., Kawasaki, M., Kakiuchi, T., Shibata, H., Wakatsuki, S., Maki, M.
Deposit date:2008-09-01
Release date:2008-11-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystallization and X-ray diffraction analysis of N-terminally truncated human ALG-2
ACTA CRYSTALLOGR.,SECT.F, 64, 2008
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