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2Q7H
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BU of 2q7h by Molmil
Pyrrolysyl-tRNA synthetase bound to adenylated pyrrolysine and pyrophosphate
Descriptor: (2R)-2-AMINO-6-({[(2S,3R)-3-METHYLPYRROLIDIN-2-YL]CARBONYL}AMINO)HEXANOYL [(2S,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL HYDROGEN (R)-PHOSPHATE, 1,2-ETHANEDIOL, PYROPHOSPHATE 2-, ...
Authors:Kavran, J.M, Steitz, T.A.
Deposit date:2007-06-06
Release date:2007-07-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2Q7E
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BU of 2q7e by Molmil
The structure of pyrrolysyl-tRNA synthetase bound to an ATP analogue
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Kavran, J.M, Steitz, T.A.
Deposit date:2007-06-06
Release date:2007-07-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2Q7G
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BU of 2q7g by Molmil
Pyrrolysine tRNA Synthetase bound to a pyrrolysine analogue (cyc) and ATP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Kavran, J.M, Steitz, T.A.
Deposit date:2007-06-06
Release date:2007-07-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3N1Q
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BU of 3n1q by Molmil
Crystal Structure of DhhN bound to CDOFn3
Descriptor: CALCIUM ION, Cell adhesion molecule-related/down-regulated by oncogenes, Desert hedgehog protein, ...
Authors:Kavran, J.M, Leahy, D.J.
Deposit date:2010-05-16
Release date:2010-06-02
Last modified:2023-07-26
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:All mammalian Hedgehog proteins interact with cell adhesion molecule, down-regulated by oncogenes (CDO) and brother of CDO (BOC) in a conserved manner.
J.Biol.Chem., 285, 2010
3N1F
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BU of 3n1f by Molmil
Crystal Structure of IhhN bound to CDOFn3
Descriptor: CALCIUM ION, Cell adhesion molecule-related/down-regulated by oncogenes, Indian hedgehog protein, ...
Authors:Kavran, J.M, Leahy, D.J.
Deposit date:2010-05-15
Release date:2010-06-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:All mammalian Hedgehog proteins interact with cell adhesion molecule, down-regulated by oncogenes (CDO) and brother of CDO (BOC) in a conserved manner.
J.Biol.Chem., 285, 2010
3N1M
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BU of 3n1m by Molmil
Crystal Structure of IhhN bound to BOCFn3
Descriptor: Brother of CDO, CALCIUM ION, Indian hedgehog protein, ...
Authors:Kavran, J.M, Leahy, D.J.
Deposit date:2010-05-15
Release date:2010-06-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:All mammalian Hedgehog proteins interact with cell adhesion molecule, down-regulated by oncogenes (CDO) and brother of CDO (BOC) in a conserved manner.
J.Biol.Chem., 285, 2010
3N1O
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BU of 3n1o by Molmil
Crystal structure of IhhN
Descriptor: CALCIUM ION, Indian hedgehog protein, ZINC ION
Authors:Kavran, J.M, Leahy, D.J.
Deposit date:2010-05-16
Release date:2010-06-02
Last modified:2023-07-26
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:All mammalian Hedgehog proteins interact with cell adhesion molecule, down-regulated by oncogenes (CDO) and brother of CDO (BOC) in a conserved manner.
J.Biol.Chem., 285, 2010
3N1G
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BU of 3n1g by Molmil
Crystal structure of DhhN bound to BOCFn3
Descriptor: Brother of CDO, CALCIUM ION, Desert hedgehog protein, ...
Authors:Kavran, J.M, Leahy, D.J.
Deposit date:2010-05-15
Release date:2010-06-02
Last modified:2023-07-26
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:All mammalian Hedgehog proteins interact with cell adhesion molecule, down-regulated by oncogenes (CDO) and brother of CDO (BOC) in a conserved manner.
J.Biol.Chem., 285, 2010
3N1R
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BU of 3n1r by Molmil
Crystal Structure of ShhN
Descriptor: CALCIUM ION, Sonic hedgehog protein, ZINC ION
Authors:Kavran, J.M, Leahy, D.J.
Deposit date:2010-05-16
Release date:2010-06-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal Structure of ShhN
TO BE PUBLISHED
3N1P
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BU of 3n1p by Molmil
Crystal Structure of IhhN bound to BOCFn3
Descriptor: Brother of CDO, CALCIUM ION, Indian hedgehog protein, ...
Authors:Kavran, J.M, Leahy, D.J.
Deposit date:2010-05-16
Release date:2010-06-02
Last modified:2023-07-26
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:All mammalian Hedgehog proteins interact with cell adhesion molecule, down-regulated by oncogenes (CDO) and brother of CDO (BOC) in a conserved manner.
J.Biol.Chem., 285, 2010
2ZIM
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BU of 2zim by Molmil
Pyrrolysyl-tRNA synthetase bound to adenylated pyrrolysine and pyrophosphate
Descriptor: (2R)-2-AMINO-6-({[(2S,3R)-3-METHYLPYRROLIDIN-2-YL]CARBONYL}AMINO)HEXANOYL [(2S,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL HYDROGEN (R)-PHOSPHATE, 1,2-ETHANEDIOL, PYROPHOSPHATE 2-, ...
Authors:Steitz, T.A, Kavran, J.M.
Deposit date:2008-02-19
Release date:2008-03-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation.
Proc.Natl.Acad.Sci.Usa, 104, 2007
4PFJ
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BU of 4pfj by Molmil
The structure of bi-acetylated SAHH
Descriptor: ADENOSINE, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Kavran, J.M, Wang, Y, Cole, P.A, Leahy, D.J.
Deposit date:2014-04-29
Release date:2014-10-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Regulation of s-adenosylhomocysteine hydrolase by lysine acetylation.
J.Biol.Chem., 289, 2014
4PGF
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BU of 4pgf by Molmil
The structure of mono-acetylated SAHH
Descriptor: ADENOSINE, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Kavran, J.M, Wang, Y, Cole, P.A, Leahy, D.J.
Deposit date:2014-05-01
Release date:2014-10-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Regulation of s-adenosylhomocysteine hydrolase by lysine acetylation.
J.Biol.Chem., 289, 2014
2QA4
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BU of 2qa4 by Molmil
A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit
Descriptor: 23S RIBOSOMAL RNA, 50S RIBOSOMAL PROTEIN L31E, 50S ribosomal protein L10e, ...
Authors:Steitz, T.A, Kavran, J.M.
Deposit date:2007-06-14
Release date:2008-04-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the base of the L7/L12 stalk of the Haloarcula marismortui large ribosomal subunit: Analysis of L11 movements
J.Mol.Biol., 371, 2007
6Q1L
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BU of 6q1l by Molmil
Crystal structure of oxidized iodotyrosine deiodinase (IYD) bound to FMN and 3-iodo-L-tyrosine
Descriptor: 3-IODO-TYROSINE, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Sun, Z, Kavran, J.M, Rokita, S.E.
Deposit date:2019-08-05
Release date:2021-04-07
Last modified:2022-04-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The minimal structure for iodotyrosine deiodinase function is defined by an outlier protein from the thermophilic bacterium Thermotoga neapolitana.
J.Biol.Chem., 297, 2021
6TYK
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BU of 6tyk by Molmil
Crystal structure of iodotyrosine deiodinase (IYD) in the semiquinone form bound to FMN and 3-iodo-L-tyrosine
Descriptor: 3-IODO-TYROSINE, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Sun, Z, Kavran, J.M, Rokita, S.E.
Deposit date:2019-08-09
Release date:2021-04-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of Tn IYD bound in the semiquinone form bound to FMN and 3-iodo-L-tyrosine
To Be Published
6BN1
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BU of 6bn1 by Molmil
Salvador Hippo SARAH domain complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, NICKEL (II) ION, Scaffold protein salvador, ...
Authors:Cairns, L, Kavran, J.M.
Deposit date:2017-11-15
Release date:2018-03-14
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Salvador has an extended SARAH domain that mediates binding to Hippo kinase.
J. Biol. Chem., 293, 2018
6Q1B
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BU of 6q1b by Molmil
Crystal structure of oxidized iodotyrosine deiodinase (IYD) bound to FMN and 3-fluoro-L-tyrosine
Descriptor: 3-FLUOROTYROSINE, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Sun, Z, Kavran, J.M, Rokita, S.E.
Deposit date:2019-08-03
Release date:2021-02-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.596 Å)
Cite:Crystal structure of oxidized Tn IYD bound to FMN and 3-fluoro-L-tyrosine
To Be Published
6PZ0
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BU of 6pz0 by Molmil
Crystal structure of oxidized iodotyrosine deiodinase (IYD) bound to FMN and L-Tyrosine
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, TYROSINE, ...
Authors:Sun, Z, Kavran, J.M, Rokita, S.E.
Deposit date:2019-07-31
Release date:2021-02-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The minimal structure for iodotyrosine deiodinase function is defined by an outlier protein from the thermophilic bacterium Thermotoga neapolitana.
J.Biol.Chem., 297, 2021
4Y6C
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BU of 4y6c by Molmil
Q17M crystal structure of Podosopora anserina putative kinesin light chain nearly identical TPR-like repeats
Descriptor: ANSERINA PUTATIVE KINESIN LIGHT chain, SULFATE ION
Authors:Marold, J.D, Kavran, J.M, Bowman, G.D, Barrick, D.
Deposit date:2015-02-12
Release date:2015-10-07
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.772 Å)
Cite:A Naturally Occurring Repeat Protein with High Internal Sequence Identity Defines a New Class of TPR-like Proteins.
Structure, 23, 2015
4Y6W
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BU of 4y6w by Molmil
Crystal structure of Podosopora anserina putative kinesin light chain nearly identical TPR-like repeats
Descriptor: NaB(AB)3ACb - light chain TPR-like repeats
Authors:Marold, J.D, Kavran, J.M, Bowman, G.D, Barrick, D.
Deposit date:2015-02-13
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.587 Å)
Cite:A Naturally Occurring Repeat Protein with High Internal Sequence Identity Defines a New Class of TPR-like Proteins.
Structure, 23, 2015
5KRD
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BU of 5krd by Molmil
Crystal structure of haliscomenobacter hydrossis iodotyrosine deiodinase (IYD) bound to FMN and 2-iodophenol (2IP)
Descriptor: 2-iodanylphenol, FLAVIN MONONUCLEOTIDE, Nitroreductase
Authors:Ingavat, N, Kavran, J.M, Sun, Z, Rokita, S.
Deposit date:2016-07-07
Release date:2017-02-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Active Site Binding Is Not Sufficient for Reductive Deiodination by Iodotyrosine Deiodinase.
Biochemistry, 56, 2017
5KO8
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BU of 5ko8 by Molmil
Crystal structure of haliscomenobacter hydrossis iodotyrosine deiodinase (IYD) bound to FMN and mono-iodotyrosine (I-Tyr)
Descriptor: 3-IODO-TYROSINE, FLAVIN MONONUCLEOTIDE, Nitroreductase
Authors:Ingavat, N, Kavran, J.M, Sun, Z, Rokita, S.E.
Deposit date:2016-06-29
Release date:2017-02-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Active Site Binding Is Not Sufficient for Reductive Deiodination by Iodotyrosine Deiodinase.
Biochemistry, 56, 2017
5KO7
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BU of 5ko7 by Molmil
Crystal structure of haliscomenobacter hydrossis iodotyrosine deiodinase (IYD) bound to FMN
Descriptor: FLAVIN MONONUCLEOTIDE, Nitroreductase
Authors:Ingavat, N, Kavran, J.M, Sun, Z, Rokita, S.
Deposit date:2016-06-29
Release date:2017-02-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.248 Å)
Cite:Active Site Binding Is Not Sufficient for Reductive Deiodination by Iodotyrosine Deiodinase.
Biochemistry, 56, 2017
1FAO
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BU of 1fao by Molmil
STRUCTURE OF THE PLECKSTRIN HOMOLOGY DOMAIN FROM DAPP1/PHISH IN COMPLEX WITH INOSITOL 1,3,4,5-TETRAKISPHOSPHATE
Descriptor: DUAL ADAPTOR OF PHOSPHOTYROSINE AND 3-PHOSPHOINOSITIDES, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
Authors:Ferguson, K.M, Kavran, J.M, Sankaran, V.G, Fournier, E, Isakoff, S.J, Skolnik, E.Y, Lemmon, M.A.
Deposit date:2000-07-13
Release date:2000-07-20
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for discrimination of 3-phosphoinositides by pleckstrin homology domains.
Mol.Cell, 6, 2000

 

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