Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1X02
DownloadVisualize
BU of 1x02 by Molmil
Solution structure of stereo array isotope labeled (SAIL) calmodulin
Descriptor: CALCIUM ION, calmodulin
Authors:Kainosho, M, Torizawa, T, Terauchi, T, Ono, A.M, Guntert, P.
Deposit date:2005-03-11
Release date:2006-03-07
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Optimal isotope labelling for NMR protein structure determinations.
Nature, 440, 2006
2D21
DownloadVisualize
BU of 2d21 by Molmil
NMR Structure of stereo-array isotope labelled (SAIL) maltodextrin-binding protein (MBP)
Descriptor: Maltose-binding periplasmic protein
Authors:Kainosho, M, Torizawa, T, Iwashita, Y, Terauchi, T, Ono, A.M, Guntert, P.
Deposit date:2005-09-02
Release date:2006-03-07
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Optimal isotope labelling for NMR protein structure determinations.
Nature, 440, 2006
1BXD
DownloadVisualize
BU of 1bxd by Molmil
NMR STRUCTURE OF THE HISTIDINE KINASE DOMAIN OF THE E. COLI OSMOSENSOR ENVZ
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PROTEIN (OSMOLARITY SENSOR PROTEIN (ENVZ))
Authors:Tanaka, T, Saha, S.K, Tomomori, C, Ishima, R, Liu, D, Tong, K.I, Park, H, Dutta, R, Qin, L, Swindells, M.B, Yamazaki, T, Ono, A.M, Kainosho, M, Inouye, M, Ikura, M.
Deposit date:1998-10-02
Release date:1999-10-02
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of the histidine kinase domain of the E. coli osmosensor EnvZ.
Nature, 396, 1998
1BHU
DownloadVisualize
BU of 1bhu by Molmil
THE 3D STRUCTURE OF THE STREPTOMYCES METALLOPROTEINASE INHIBITOR, SMPI, ISOLATED FROM STREPTOMYCES NIGRESCENS TK-23, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: METALLOPROTEINASE INHIBITOR
Authors:Tate, S, Ohno, A, Seeram, S.S, Hiraga, K, Oda, K, Kainosho, M.
Deposit date:1998-06-10
Release date:1999-01-06
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:NMR structure of the Streptomyces metalloproteinase inhibitor, SMPI, isolated from Streptomyces nigrescens TK-23: another example of an ancestral beta gamma-crystallin precursor structure.
J.Mol.Biol., 282, 1998
1C4L
DownloadVisualize
BU of 1c4l by Molmil
SOLUTION STRUCTURE OF AN RNA DUPLEX INCLUDING A C-U BASE-PAIR
Descriptor: RNA (5'-R(*CP*CP*UP*GP*CP*GP*UP*CP*G)-3'), RNA (5'-R(*CP*GP*AP*CP*UP*CP*AP*GP*G)-3')
Authors:Tanaka, Y, Kojima, C, Yamazaki, T, Kodama, T.S, Yasuno, K, Miyashita, S, Ono, A.M, Ono, A.S, Kainosho, M, Kyogoku, Y.
Deposit date:1999-08-30
Release date:2000-08-09
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of an RNA duplex including a C-U base pair.
Biochemistry, 39, 2000
2RS4
DownloadVisualize
BU of 2rs4 by Molmil
NMR structure of stereo-array isotope labelled (SAIL) peptidyl-prolyl cis-trans isomerase from E. coli (EPPIb)
Descriptor: Peptidyl-prolyl cis-trans isomerase B
Authors:Takeda, M, Jee, J, Ono, A.M, Okuma, K, Terauchi, T, Kainosho, M.
Deposit date:2011-07-16
Release date:2011-10-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Hydrogen exchange study on the hydroxyl groups of serine and threonine residues in proteins and structure refinement using NOE restraints with polar side-chain groups
J.Am.Chem.Soc., 133, 2011
2JZ4
DownloadVisualize
BU of 2jz4 by Molmil
Putative 32 kDa myrosinase binding protein At3g16450.1 from Arabidopsis thaliana
Descriptor: Jasmonate inducible protein isolog
Authors:Takeda, N, Sugimori, N, Torizawa, T, Terauchi, T, Ono, A.M, Yagi, H, Yamaguchi, Y, Kato, K, Ikeya, T, Guntert, P, Aceti, D.J, Markley, J.L, Kainosho, M, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-12-28
Release date:2008-02-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of the putative 32 kDa myrosinase-binding protein from Arabidopsis (At3g16450.1) determined by SAIL-NMR.
Febs J., 275, 2008
2JW8
DownloadVisualize
BU of 2jw8 by Molmil
Solution structure of stereo-array isotope labelled (SAIL) C-terminal dimerization domain of SARS coronavirus nucleocapsid protein
Descriptor: Nucleocapsid protein
Authors:Takeda, M, Chang, C, Ikeya, T, Guntert, P, Chang, Y, Hsu, Y, Huang, T, Kainosho, M.
Deposit date:2007-10-06
Release date:2008-08-26
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of the c-terminal dimerization domain of SARS coronavirus nucleocapsid protein solved by the SAIL-NMR method
J.Mol.Biol., 380, 2008
2L6X
DownloadVisualize
BU of 2l6x by Molmil
Solution NMR Structure of Proteorhodopsin.
Descriptor: Green-light absorbing proteorhodopsin, RETINAL
Authors:Reckel, S, Gottstein, D, Stehle, J, Loehr, F, Takeda, M, Silvers, R, Kainosho, M, Glaubitz, C, Bernhard, F, Schwalbe, H, Guntert, P, Doetsch, V, Membrane Protein Structures by Solution NMR (MPSbyNMR)
Deposit date:2010-11-29
Release date:2011-11-09
Last modified:2020-02-05
Method:SOLUTION NMR
Cite:Solution NMR structure of proteorhodopsin.
Angew.Chem.Int.Ed.Engl., 50, 2011
2BA3
DownloadVisualize
BU of 2ba3 by Molmil
NMR Structure of NikA N-terminal Fragment
Descriptor: NikA
Authors:Yoshida, H, Furuya, N, Lin, Y.J, Guntert, P, Komano, T, Kainosho, M.
Deposit date:2005-10-14
Release date:2006-10-03
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:NMR Structure of NikA N-teminal Fragment
To be Published
1IQ5
DownloadVisualize
BU of 1iq5 by Molmil
Calmodulin/nematode CA2+/Calmodulin dependent kinase kinase fragment
Descriptor: CA2+/CALMODULIN DEPENDENT KINASE KINASE, CALCIUM ION, CALMODULIN
Authors:Kurokawa, H, Osawa, M, Kurihara, H, Katayama, N, Tokumitsu, H, Swindells, M.B, Kainosho, M, Ikura, M.
Deposit date:2001-06-14
Release date:2001-09-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Target-induced conformational adaptation of calmodulin revealed by the crystal structure of a complex with nematode Ca(2+)/calmodulin-dependent kinase kinase peptide
J.Mol.Biol., 312, 2001
1J2N
DownloadVisualize
BU of 1j2n by Molmil
Solution structure of CPI-17(22-120) T38D
Descriptor: 17-kDa PKC-potentiated inhibitory protein of PP1
Authors:Ohki, S, Eto, M, Shimizu, M, Takada, R, Brautigan, D.L, Kainosho, M.
Deposit date:2003-01-07
Release date:2003-06-17
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Distinctive Solution Conformation of Phosphatase Inhibitor CPI-17 Substituted with Aspartate at the Phosphorylation-site Threonine Residue
J.Mol.Biol., 326, 2003
1J2M
DownloadVisualize
BU of 1j2m by Molmil
Solution structure of CPI-17(22-120)
Descriptor: 17-kDa PKC-potentiated inhibitory protein of PP1
Authors:Ohki, S, Eto, M, Takada, R, Shimizu, M, Brautigan, D.L, Kainosho, M.
Deposit date:2003-01-07
Release date:2003-06-17
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Distinctive Solution Conformation of Phosphatase Inhibitor CPI-17 Substituted with Aspartate at the Phosphorylation-site Threonine Residue
J.Mol.Biol., 326, 2003
1K5O
DownloadVisualize
BU of 1k5o by Molmil
CPI-17(35-120) deletion mutant
Descriptor: CPI-17
Authors:Ohki, S, Eto, M, Kariya, E, Hayano, T, Hayashi, Y, Yazawa, M, Brautigan, D, Kainosho, M.
Deposit date:2001-10-11
Release date:2002-10-11
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution NMR Structure of the Myosin Phosphatase Inhibitor Protein CPI-17 Shows Phosphorylation-induced Conformational Changes Responsible for Activation
J.Mol.Biol., 314, 2001
1MG8
DownloadVisualize
BU of 1mg8 by Molmil
NMR structure of ubiquitin-like domain in murine Parkin
Descriptor: Parkin
Authors:Tashiro, M, Okubo, S, Shimotakahara, S, Hatanaka, H, Yasuda, H, Kainosho, M, Yokoyama, S, Shindo, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-08-15
Release date:2003-04-08
Last modified:2022-12-21
Method:SOLUTION NMR
Cite:NMR structure of ubiquitin-like domain in PARKIN: Gene product of familial Parkinson's disease.
J.Biomol.NMR, 25, 2003
1CYU
DownloadVisualize
BU of 1cyu by Molmil
SOLUTION NMR STRUCTURE OF RECOMBINANT HUMAN CYSTATIN A UNDER THE CONDITION OF PH 3.8 AND 310K
Descriptor: CYSTATIN A
Authors:Tate, S, Tate, N.U, Ushioda, T, Samejima, T, Kainosho, M.
Deposit date:1995-08-24
Release date:1995-12-07
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Solution structure of a human cystatin A variant, cystatin A2-98 M65L, by NMR spectroscopy. A possible role of the interactions between the N- and C-termini to maintain the inhibitory active form of cystatin A.
Biochemistry, 34, 1995
1CYV
DownloadVisualize
BU of 1cyv by Molmil
SOLUTION NMR STRUCTURE OF RECOMBINANT HUMAN CYSTATIN A UNDER THE CONDITION OF PH 3.8 AND 310K
Descriptor: CYSTATIN A
Authors:Tate, S, Tate, N.U, Ushioda, T, Samejima, T, Kainosho, M.
Deposit date:1995-08-24
Release date:1995-12-07
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Solution structure of a human cystatin A variant, cystatin A2-98 M65L, by NMR spectroscopy. A possible role of the interactions between the N- and C-termini to maintain the inhibitory active form of cystatin A.
Biochemistry, 34, 1995
1DUF
DownloadVisualize
BU of 1duf by Molmil
THE NMR STRUCTURE OF DNA DODECAMER DETERMINED IN AQUEOUS DILUTE LIQUID CRYSTALLINE PHASE
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Tjandra, N, Tate, S, Ono, A, Kainosho, M, Bax, A.
Deposit date:2000-01-17
Release date:2000-07-14
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:The NMR Structure of a DNA Dodecamer in an Aqueous Dilute Liquid Crystalline Phase
J.Am.Chem.Soc., 122, 2000
1F53
DownloadVisualize
BU of 1f53 by Molmil
NMR STRUCTURE OF KILLER TOXIN-LIKE PROTEIN SKLP
Descriptor: YEAST KILLER TOXIN-LIKE PROTEIN
Authors:Ohki, S, Kariya, E, Hiraga, K, Wakamiya, A, Isobe, T, Oda, K, Kainosho, M.
Deposit date:2000-06-12
Release date:2000-12-27
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:NMR structure of Streptomyces killer toxin-like protein, SKLP: further evidence for the wide distribution of single-domain betagamma-crystallin superfamily proteins.
J.Mol.Biol., 305, 2001
1GD4
DownloadVisualize
BU of 1gd4 by Molmil
SOLUTION STRUCTURE OF P25S CYSTATIN A
Descriptor: CYSTATIN A
Authors:Shimba, N, Kariya, E, Tate, S, Kaji, H, Kainosho, M.
Deposit date:2000-09-08
Release date:2001-09-08
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structural comparison between wild-type and P25S human cystatin A by NMR spectroscopy. Does this mutation affect the a-helix conformation ?
J.STRUCT.FUNCT.GENOM., 1, 2000
1GD3
DownloadVisualize
BU of 1gd3 by Molmil
refined solution structure of human cystatin A
Descriptor: CYSTATIN A
Authors:Shimba, N, Kariya, E, Tate, S, Kaji, H, Kainosho, M.
Deposit date:2000-09-08
Release date:2001-09-08
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structural comparison between wild-type and P25S human cystatin A by NMR spectroscopy. Does this mutation affect the a-helix conformation ?
J.STRUCT.FUNCT.GENOM., 1, 2000
1JO7
DownloadVisualize
BU of 1jo7 by Molmil
Solution Structure of Influenza A Virus Promoter
Descriptor: Influenza A virus promoter RNA
Authors:Bae, S.-H, Cheong, H.-K, Lee, J.-H, Cheong, C, Kainosho, M, Choi, B.-S.
Deposit date:2001-07-27
Release date:2001-09-19
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structural features of an influenza virus promoter and their implications for viral RNA synthesis.
Proc.Natl.Acad.Sci.USA, 98, 2001
7WEM
DownloadVisualize
BU of 7wem by Molmil
Solid-state NMR Structure of TFo c-Subunit Ring
Descriptor: ATP synthase subunit c
Authors:Akutsu, H, Todokoro, Y, Kang, S.-J, Suzuki, T, Yoshida, M, Ikegami, T, Fujiwara, T.
Deposit date:2021-12-23
Release date:2022-08-10
Last modified:2022-08-24
Method:SOLID-STATE NMR
Cite:Chemical Conformation of the Essential Glutamate Site of the c -Ring within Thermophilic Bacillus F o F 1 -ATP Synthase Determined by Solid-State NMR Based on its Isolated c -Ring Structure.
J.Am.Chem.Soc., 144, 2022
5NJJ
DownloadVisualize
BU of 5njj by Molmil
PTB domain of human Numb isoform-1
Descriptor: ALA-TYR-ILE-GLY-PRO-PTR-LEU, Protein numb homolog, SULFATE ION
Authors:Mapelli, M, Di Fiore, P.P.
Deposit date:2017-03-29
Release date:2017-12-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Numb-Mdm2 fuzzy complex reveals an isoform-specific involvement of Numb in breast cancer.
J. Cell Biol., 217, 2018
5NJK
DownloadVisualize
BU of 5njk by Molmil
PTB domain of human Numb isoform-1
Descriptor: ALA-TYR-ILE-GLY-PRO-PTR-LEU, Protein numb homolog, SULFATE ION
Authors:Mapelli, M, Di Fiore, P.P.
Deposit date:2017-03-29
Release date:2017-12-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:A Numb-Mdm2 fuzzy complex reveals an isoform-specific involvement of Numb in breast cancer.
J. Cell Biol., 217, 2018

 

12>

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon