Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6IJP
DownloadVisualize
BU of 6ijp by Molmil
The structure of the ADAL-IMP complex
Descriptor: Adenosine/AMP deaminase family protein, INOSINIC ACID, ZINC ION
Authors:Xie, W, Jia, Q.
Deposit date:2018-10-11
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Alternative conformation induced by substrate binding for Arabidopsis thalianaN6-methyl-AMP deaminase.
Nucleic Acids Res., 47, 2019
6IJN
DownloadVisualize
BU of 6ijn by Molmil
The D295N mutant of the N6-methyl-AMP deaminase from Arabidopsis thaliana complexed with N6m-AMP
Descriptor: Adenosine/AMP deaminase family protein, N6-METHYLADENOSINE-5'-MONOPHOSPHATE
Authors:Xie, W, Jia, Q.
Deposit date:2018-10-10
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Alternative conformation induced by substrate binding for Arabidopsis thalianaN6-methyl-AMP deaminase.
Nucleic Acids Res., 47, 2019
6IJM
DownloadVisualize
BU of 6ijm by Molmil
Apo structure of the N6-methyl-AMP Deaminase from Arabidopsis thaliana
Descriptor: Adenosine/AMP deaminase family protein, ZINC ION
Authors:Xie, W, Jia, Q.
Deposit date:2018-10-10
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.016 Å)
Cite:Alternative conformation induced by substrate binding for Arabidopsis thalianaN6-methyl-AMP deaminase.
Nucleic Acids Res., 47, 2019
8IXJ
DownloadVisualize
BU of 8ixj by Molmil
Middle segment of the bacteriophage M13 mini variant
Descriptor: Capsid protein G8P
Authors:Xiang, Y, Jia, Q.
Deposit date:2023-04-01
Release date:2023-08-16
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structure of a bacteriophage M13 mini variant.
Nat Commun, 14, 2023
8JWT
DownloadVisualize
BU of 8jwt by Molmil
Asymmetric middle segment of the bacteriophage M13 mini variant
Descriptor: Capsid protein G8P
Authors:Xiang, Y, Jia, Q.
Deposit date:2023-06-29
Release date:2023-08-16
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structure of a bacteriophage M13 mini variant.
Nat Commun, 14, 2023
8IXL
DownloadVisualize
BU of 8ixl by Molmil
top segment of the bacteriophage M13 mini variant
Descriptor: Capsid protein G8P, Tail virion protein G7P, Tail virion protein G9P
Authors:Xiang, Y, Jia, Q.
Deposit date:2023-04-01
Release date:2023-09-13
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of a bacteriophage M13 mini variant.
Nat Commun, 14, 2023
8IXK
DownloadVisualize
BU of 8ixk by Molmil
bottom segment of the bacteriophage M13 mini variant
Descriptor: Attachment protein G3P, Capsid protein G8P, Head virion protein G6P
Authors:Xiang, Y, Jia, Q.
Deposit date:2023-04-01
Release date:2023-09-13
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of a bacteriophage M13 mini variant.
Nat Commun, 14, 2023
5Y9O
DownloadVisualize
BU of 5y9o by Molmil
The apo structure of Legionella pneumophila WipA
Descriptor: IODIDE ION, WipA
Authors:Xie, W, Jia, Q.
Deposit date:2017-08-26
Release date:2018-05-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.554 Å)
Cite:Legionella pneumophila effector WipA, a bacterial PPP protein phosphatase with PTP activity
Acta Biochim. Biophys. Sin. (Shanghai), 50, 2018
7DBF
DownloadVisualize
BU of 7dbf by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase
Descriptor: Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-10-20
Release date:2021-09-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The C-terminal loop of Arabidopsis thaliana guanosine deaminase is essential to catalysis.
Chem.Commun.(Camb.), 57, 2021
7DC9
DownloadVisualize
BU of 7dc9 by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase mutant E82Q complex with guanosine
Descriptor: GUANOSINE, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-10-23
Release date:2021-09-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The C-terminal loop of Arabidopsis thaliana guanosine deaminase is essential to catalysis.
Chem.Commun.(Camb.), 57, 2021
7DCA
DownloadVisualize
BU of 7dca by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase bound by xanthosine
Descriptor: 2,3-dihydroxanthosine, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-10-23
Release date:2021-09-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The C-terminal loop of Arabidopsis thaliana guanosine deaminase is essential to catalysis.
Chem.Commun.(Camb.), 57, 2021
7DCW
DownloadVisualize
BU of 7dcw by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase complexed with adenosine
Descriptor: ADENOSINE, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-10-27
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DCB
DownloadVisualize
BU of 7dcb by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase complexed with inosine
Descriptor: Guanosine deaminase, INOSINE, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-10-23
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DM5
DownloadVisualize
BU of 7dm5 by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase in reaction with guanosine
Descriptor: 2,3-dihydroxanthosine, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-12-02
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DM6
DownloadVisualize
BU of 7dm6 by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase complexed with crotonoside
Descriptor: 6-azanyl-9-[(2R,3R,4S,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1H-purin-2-one, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-12-02
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DGC
DownloadVisualize
BU of 7dgc by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase in reaction with 2'-O-Methylguanosine
Descriptor: 9-[(2R,3R,4R)-5-(hydroxymethyl)-3-methoxy-4-oxidanyl-oxolan-2-yl]-3H-purine-2,6-dione, Guanosine deaminase, SODIUM ION, ...
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-11-11
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DQN
DownloadVisualize
BU of 7dqn by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase mutant Y185F complexed with guanosine
Descriptor: GUANOSINE, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-12-24
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DH1
DownloadVisualize
BU of 7dh1 by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase in reaction with N2-Methylguanosine
Descriptor: 2,3-dihydroxanthosine, Guanosine deaminase, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2020-11-12
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7E8L
DownloadVisualize
BU of 7e8l by Molmil
The structure of Spodoptera litura chemosensory protein
Descriptor: Putative chemosensory protein CSP8
Authors:Xie, W, Jia, Q, Zeng, H, Xiao, N, Tang, J, Gao, S, Zhang, J.
Deposit date:2021-03-02
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Crystal Structure of the Spodoptera litura Chemosensory Protein CSP8.
Insects, 12, 2021
7W1Q
DownloadVisualize
BU of 7w1q by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase mutant E82Q complexed with 2'-O-methylguanosine
Descriptor: Guanosine deaminase, O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2021-11-19
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
1LZZ
DownloadVisualize
BU of 1lzz by Molmil
Rat neuronal NOS heme domain with N-isopropyl-N'-hydroxyguanidine bound
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, N-ISOPROPYL-N'-HYDROXYGUANIDINE, ...
Authors:Li, H, Shimizu, H, Flinspach, M, Jamal, J, Yang, W, Xian, M, Cai, T, Wen, E.Z, Jia, Q, Wang, P.G, Poulos, T.L.
Deposit date:2002-06-11
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The Novel Binding Mode of N-Alkyl-N'-Hydroxyguanidine to Neuronal Nitric Oxide Synthase Provides Mechanistic Insights into NO Biosynthesis
Biochemistry, 41, 2002
1LZX
DownloadVisualize
BU of 1lzx by Molmil
Rat neuronal NOS heme domain with NG-hydroxy-L-arginine bound
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, N-OMEGA-HYDROXY-L-ARGININE, ...
Authors:Li, H, Shimizu, H, Flinspach, M, Jamal, J, Yang, W, Xian, M, Cai, T, Wen, E.Z, Jia, Q, Wang, P.G, Poulos, T.L.
Deposit date:2002-06-11
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Novel Binding Mode of N-Alkyl-N'-Hydroxyguanidine to Neuronal Nitric Oxide Synthase Provides Mechanistic Insights into NO Biosynthesis
Biochemistry, 41, 2002
1M00
DownloadVisualize
BU of 1m00 by Molmil
Rat neuronal NOS heme domain with N-butyl-N'-hydroxyguanidine bound
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, N-BUTYL-N'-HYDROXYGUANIDINE, ...
Authors:Li, H, Shimizu, H, Flinspach, M, Jamal, J, Yang, W, Xian, M, Cai, T, Wen, E.Z, Jia, Q, Wang, P.G, Poulos, T.L.
Deposit date:2002-06-11
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The Novel Binding Mode of N-Alkyl-N'-Hydroxyguanidine to Neuronal Nitric Oxide Synthase Provides Mechanistic Insights into NO Biosynthesis
Biochemistry, 41, 2002
4RQF
DownloadVisualize
BU of 4rqf by Molmil
human Seryl-tRNA synthetase dimer complexed with one molecule of tRNAsec
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SERINE, Serine--tRNA ligase, ...
Authors:Xie, W, Wang, C, Guo, Y, Tian, Q, Jia, Q.
Deposit date:2014-11-03
Release date:2015-11-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.503 Å)
Cite:SerRS-tRNASec complex structures reveal mechanism of the first step in selenocysteine biosynthesis.
Nucleic Acids Res., 43, 2015
4RQE
DownloadVisualize
BU of 4rqe by Molmil
human Seryl-tRNA synthetase dimer complexed with two molecules of tRNAsec
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SERINE, Serine--tRNA ligase, ...
Authors:Xie, W, Wang, C, Guo, Y, Tian, Q, Jia, Q.
Deposit date:2014-11-03
Release date:2015-11-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (4 Å)
Cite:SerRS-tRNASec complex structures reveal mechanism of the first step in selenocysteine biosynthesis.
Nucleic Acids Res., 43, 2015

 

123>

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon