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1WM5
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BU of 1wm5 by Molmil
Crystal structure of the N-terminal TPR domain (1-203) of p67phox
Descriptor: Neutrophil cytosol factor 2, SULFATE ION
Authors:Inagaki, F, Suzuki, N.N.
Deposit date:2004-07-03
Release date:2005-10-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the N-terminal TPR domain (1-203) of p67phox
To be Published
1EPG
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BU of 1epg by Molmil
THREE-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE STRUCTURES OF MOUSE EPIDERMAL GROWTH FACTOR IN ACIDIC AND PHYSIOLOGICAL PH SOLUTIONS
Descriptor: EPIDERMAL GROWTH FACTOR
Authors:Kohda, D, Inagaki, F.
Deposit date:1992-03-24
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Three-dimensional nuclear magnetic resonance structures of mouse epidermal growth factor in acidic and physiological pH solutions.
Biochemistry, 31, 1992
1EPJ
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BU of 1epj by Molmil
THREE-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE STRUCTURES OF MOUSE EPIDERMAL GROWTH FACTOR IN ACIDIC AND PHYSIOLOGICAL PH SOLUTIONS
Descriptor: EPIDERMAL GROWTH FACTOR
Authors:Kohda, D, Inagaki, F.
Deposit date:1992-03-24
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Three-dimensional nuclear magnetic resonance structures of mouse epidermal growth factor in acidic and physiological pH solutions.
Biochemistry, 31, 1992
1EPH
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BU of 1eph by Molmil
THREE-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE STRUCTURES OF MOUSE EPIDERMAL GROWTH FACTOR IN ACIDIC AND PHYSIOLOGICAL PH SOLUTIONS
Descriptor: EPIDERMAL GROWTH FACTOR
Authors:Kohda, D, Inagaki, F.
Deposit date:1992-03-24
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Three-dimensional nuclear magnetic resonance structures of mouse epidermal growth factor in acidic and physiological pH solutions.
Biochemistry, 31, 1992
1EPI
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BU of 1epi by Molmil
THREE-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE STRUCTURES OF MOUSE EPIDERMAL GROWTH FACTOR IN ACIDIC AND PHYSIOLOGICAL PH SOLUTIONS
Descriptor: EPIDERMAL GROWTH FACTOR
Authors:Kohda, D, Inagaki, F.
Deposit date:1992-03-24
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Three-dimensional nuclear magnetic resonance structures of mouse epidermal growth factor in acidic and physiological pH solutions.
Biochemistry, 31, 1992
4DVY
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BU of 4dvy by Molmil
Crystal structure of the Helicobacter pylori CagA oncoprotein
Descriptor: Cytotoxicity-associated immunodominant antigen
Authors:Hayashi, T, Senda, M, Morohashi, H, Higashi, H, Horio, M, Kashiba, Y, Nagase, L, Sasaya, D, Shimizu, T, Venugopalan, N, Kumeta, H, Noda, N, Inagaki, F, Senda, T, Hatakeyama, M.
Deposit date:2012-02-23
Release date:2012-07-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Tertiary Structure-Function Analysis Reveals the Pathogenic Signaling Potentiation Mechanism of Helicobacter pylori Oncogenic Effector CagA
Cell Host Microbe, 12, 2012
4DVZ
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BU of 4dvz by Molmil
Crystal structure of the Helicobacter pylori CagA oncoprotein
Descriptor: Cytotoxicity-associated immunodominant antigen
Authors:Hayashi, T, Senda, M, Morohashi, H, Higashi, H, Horio, M, Kashiba, Y, Nagase, L, Sasaya, D, Shimizu, T, Venugopalan, N, Kumeta, H, Noda, N, Inagaki, F, Senda, T, Hatakeyama, M.
Deposit date:2012-02-23
Release date:2012-07-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Tertiary structure-function analysis reveals the pathogenic signaling potentiation mechanism of Helicobacter pylori oncogenic effector CagA
Cell Host Microbe, 12, 2012
5H9V
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BU of 5h9v by Molmil
Crystal structure of Regnase PIN domain, form I
Descriptor: Ribonuclease ZC3H12A, SODIUM ION
Authors:Yokogawa, M, Tsushima, T, Adachi, W, Noda, N.N, Inagaki, F.
Deposit date:2015-12-29
Release date:2016-03-16
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis for the regulation of enzymatic activity of Regnase-1 by domain-domain interactions
Sci Rep, 6, 2016
5H9W
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BU of 5h9w by Molmil
Crystal structure of Regnase PIN domain, form II
Descriptor: Ribonuclease ZC3H12A, SODIUM ION
Authors:Yokogawa, M, Tsushima, T, Adachi, W, Noda, N.N, Inagaki, F.
Deposit date:2015-12-29
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the regulation of enzymatic activity of Regnase-1 by domain-domain interactions
Sci Rep, 6, 2016
5JH9
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BU of 5jh9 by Molmil
Crystal structure of prApe1
Descriptor: CACODYLATE ION, Vacuolar aminopeptidase 1, ZINC ION
Authors:Noda, N.N, Adachi, W, Inagaki, F.
Deposit date:2016-04-20
Release date:2016-06-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for Receptor-Mediated Selective Autophagy of Aminopeptidase I Aggregates
Cell Rep, 16, 2016
5JGF
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BU of 5jgf by Molmil
Crystal structure of mApe1
Descriptor: Vacuolar aminopeptidase 1, ZINC ION
Authors:Noda, N.N, Adachi, W, Inagaki, F.
Deposit date:2016-04-20
Release date:2016-06-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural Basis for Receptor-Mediated Selective Autophagy of Aminopeptidase I Aggregates
Cell Rep, 16, 2016
2ZPN
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BU of 2zpn by Molmil
The crystal structure of Saccharomyces cerevisiae Atg8- Atg19(412-415) complex
Descriptor: Autophagy-related protein 8, SULFATE ION, Saccharomyces cerevisiae Atg19(412-415)
Authors:Noda, N.N, Inagaki, F.
Deposit date:2008-07-17
Release date:2008-12-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of target recognition by Atg8/LC3 during selective autophagy
Genes Cells, 13, 2008
3A7P
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BU of 3a7p by Molmil
The crystal structure of Saccharomyces cerevisiae Atg16
Descriptor: Autophagy protein 16
Authors:Fujioka, Y, Noda, N.N, Inagaki, F.
Deposit date:2009-10-01
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Dimeric coiled-coil structure of Saccharomyces cerevisiae Atg16 and its functional significance in autophagy.
J.Biol.Chem., 285, 2010
3A77
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BU of 3a77 by Molmil
The crystal structure of phosphorylated IRF-3
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, Interferon regulatory factor 3
Authors:Takahasi, K, Horiuchi, M, Noda, N.N, Inagaki, F.
Deposit date:2009-09-17
Release date:2010-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ser386 phosphorylation of transcription factor IRF-3 induces dimerization and association with CBP/p300 without overall conformational change.
Genes Cells, 15, 2010
3A7O
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BU of 3a7o by Molmil
The crystal structure of the coiled-coil domain of Saccharomyces cerevisiae Atg16
Descriptor: Autophagy protein 16
Authors:Fujioka, Y, Noda, N.N, Inagaki, F.
Deposit date:2009-10-01
Release date:2009-11-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Dimeric coiled-coil structure of Saccharomyces cerevisiae Atg16 and its functional significance in autophagy.
J.Biol.Chem., 285, 2010
2ZZP
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BU of 2zzp by Molmil
The crystal structure of human Atg4B(C74S)- LC3(1-124) complex
Descriptor: Cysteine protease ATG4B, Microtubule-associated proteins 1A/1B light chain 3B
Authors:Satoo, K, Noda, N.N, Inagaki, F.
Deposit date:2009-02-22
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Embo J., 28, 2009
1HSQ
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BU of 1hsq by Molmil
SOLUTION STRUCTURE OF THE SH3 DOMAIN OF PHOSPHOLIPASE CGAMMA
Descriptor: PHOSPHOLIPASE C-GAMMA (SH3 DOMAIN)
Authors:Kohda, D, Hatanaka, H, Odaka, M, Inagaki, F.
Deposit date:1994-06-13
Release date:1994-08-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain of phospholipase C-gamma.
Cell(Cambridge,Mass.), 72, 1993
1IO6
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BU of 1io6 by Molmil
GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 (GRB2) C-TERMINAL SH3 DOMAIN COMPLEXED WITH A LIGAND PEPTIDE (NMR, MINIMIZED MEAN STRUCTURE)
Descriptor: A LIGAND PEPTIDE, GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
Authors:Kawasaki, M, Ogura, K, Hatanaka, H, Inagaki, F.
Deposit date:2001-01-25
Release date:2001-02-14
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of the C-Terminal SH3 Domain of Grb2 Complexed with a Ligand Peptide: A Ligand Exchange Model of the SH3 Domain
To be Published
1MKC
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BU of 1mkc by Molmil
C-TERMINAL DOMAIN OF MIDKINE
Descriptor: PROTEIN (MIDKINE)
Authors:Iwasaki, W, Nagata, K, Hatanaka, H, Ogura, K, Inui, T, Kimura, T, Muramatsu, T, Yoshida, K, Tasumi, M, Inagaki, F.
Deposit date:1999-03-16
Release date:1999-03-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of midkine, a new heparin-binding growth factor.
EMBO J., 16, 1997
1MKN
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BU of 1mkn by Molmil
N-TERMINAL HALF OF MIDKINE
Descriptor: PROTEIN (MIDKINE)
Authors:Iwasaki, W, Nagata, K, Hatanaka, H, Ogura, K, Inui, T, Kimura, T, Muramatsu, T, Yoshida, K, Tasumi, M, Inagaki, F.
Deposit date:1999-03-16
Release date:1999-03-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of midkine, a new heparin-binding growth factor.
EMBO J., 16, 1997
1Q1O
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BU of 1q1o by Molmil
Solution Structure of the PB1 Domain of Cdc24p (Long Form)
Descriptor: Cell division control protein 24
Authors:Yoshinaga, S, Kohjima, M, Ogura, K, Yokochi, M, Takeya, R, Ito, T, Sumimoto, H, Inagaki, F.
Deposit date:2003-07-22
Release date:2003-10-14
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The PB1 domain and the PC motif-containing region are structurally similar protein binding modules
EMBO J., 22, 2003
1GFD
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BU of 1gfd by Molmil
SOLUTION STRUCTURE AND LIGAND-BINDING SITE OF THE C-TERMINAL SH3 DOMAIN OF GRB2
Descriptor: GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
Authors:Kohda, D, Terasawa, H, Hatanaka, H, Inagaki, F.
Deposit date:1994-06-13
Release date:1994-08-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure and ligand-binding site of the carboxy-terminal SH3 domain of GRB2.
Structure, 2, 1994
1GFC
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BU of 1gfc by Molmil
SOLUTION STRUCTURE AND LIGAND-BINDING SITE OF THE C-TERMINAL SH3 DOMAIN OF GRB2
Descriptor: GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
Authors:Kohda, D, Terasawa, H, Hatanaka, H, Inagaki, F.
Deposit date:1994-06-13
Release date:1994-08-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure and ligand-binding site of the carboxy-terminal SH3 domain of GRB2.
Structure, 2, 1994
1GCP
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BU of 1gcp by Molmil
CRYSTAL STRUCTURE OF VAV SH3 DOMAIN
Descriptor: VAV PROTO-ONCOGENE
Authors:Nishida, M, Nagata, K, Hachimori, Y, Ogura, K, Inagaki, F.
Deposit date:2000-08-08
Release date:2001-08-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Novel recognition mode between Vav and Grb2 SH3 domains.
EMBO J., 20, 2001
1HRE
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BU of 1hre by Molmil
SOLUTION STRUCTURE OF THE EPIDERMAL GROWTH FACTOR-LIKE DOMAIN OF HEREGULIN-ALPHA, A LIGAND FOR P180ERB4
Descriptor: HEREGULIN ALPHA
Authors:Nagata, K, Kohda, D, Hatanaka, H, Ichikawa, S, Inagaki, F.
Deposit date:1994-07-21
Release date:1994-10-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of the epidermal growth factor-like domain of heregulin-alpha, a ligand for p180erbB-4.
EMBO J., 13, 1994

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