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1A05
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BU of 1a05 by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF 3-ISOPROPYLMALATE DEHYDROGENASE FROM THIOBACILLUS FERROOXIDANS WITH 3-ISOPROPYLMALATE
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE, 3-ISOPROPYLMALIC ACID, MAGNESIUM ION
Authors:Imada, K, Inagaki, K, Matsunami, H, Kawaguchi, H, Tanaka, H, Tanaka, N, Namba, K.
Deposit date:1997-12-09
Release date:1998-06-17
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of 3-isopropylmalate dehydrogenase in complex with 3-isopropylmalate at 2.0 A resolution: the role of Glu88 in the unique substrate-recognition mechanism.
Structure, 6, 1998
5B0O
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BU of 5b0o by Molmil
Structure of the FliH-FliI complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Flagellar assembly protein FliH, Flagellum-specific ATP synthase
Authors:Imada, K, Uchida, Y, Kinoshita, M, Namba, K, Minamino, T.
Deposit date:2015-11-02
Release date:2016-03-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Insight into the flagella type III export revealed by the complex structure of the type III ATPase and its regulator
Proc.Natl.Acad.Sci.USA, 113, 2016
1IPD
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BU of 1ipd by Molmil
THREE-DIMENSIONAL STRUCTURE OF A HIGHLY THERMOSTABLE ENZYME, 3-ISOPROPYLMALATE DEHYDROGENASE OF THERMUS THERMOPHILUS AT 2.2 ANGSTROMS RESOLUTION
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE, SULFATE ION
Authors:Imada, K, Sato, M, Tanaka, N, Katsube, Y, Matsuura, Y, Oshima, T.
Deposit date:1992-01-29
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional structure of a highly thermostable enzyme, 3-isopropylmalate dehydrogenase of Thermus thermophilus at 2.2 A resolution.
J.Mol.Biol., 222, 1991
3A7M
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BU of 3a7m by Molmil
Structure of FliT, the flagellar type III chaperone for FliD
Descriptor: Flagellar protein fliT
Authors:Imada, K, Minamino, T, Kinoshita, M, Namba, K.
Deposit date:2009-09-29
Release date:2010-04-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insight into the regulatory mechanisms of interactions of the flagellar type III chaperone FliT with its binding partners.
Proc.Natl.Acad.Sci.USA, 107, 2010
2D4V
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BU of 2d4v by Molmil
Crystal structure of NAD dependent isocitrate dehydrogenase from Acidithiobacillus thiooxidans
Descriptor: CITRATE ANION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, isocitrate dehydrogenase
Authors:Imada, K, Tamura, T, Namba, K, Inagaki, K.
Deposit date:2005-10-24
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and quantum chemical analysis of NAD+-dependent isocitrate dehydrogenase: hydride transfer and co-factor specificity
Proteins, 70, 2008
2D4W
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BU of 2d4w by Molmil
Crystal structure of glycerol kinase from Cellulomonas sp. NT3060
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, glycerol kinase
Authors:Imada, K, Tamura, T, Namba, K, Inagaki, K.
Deposit date:2005-10-24
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of glycerol kinase from Cellulomonas sp. NT3060
To be Published
2D4Y
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BU of 2d4y by Molmil
Crystal structure of a 49K fragment of HAP1 (FlgK)
Descriptor: Flagellar hook-associated protein 1
Authors:Imada, K, Matsunami, H, Samatey, A.F, Nagashima, S, Namba, K.
Deposit date:2005-10-25
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the bacterial flagellar hook-filament junction
To be Published
2D4X
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BU of 2d4x by Molmil
Crystal structure of a 26K fragment of HAP3 (FlgL)
Descriptor: Flagellar hook-associated protein 3
Authors:Imada, K, Matsunami, H, Samatey, A.F, Nagashima, S, Namba, K.
Deposit date:2005-10-25
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the bacterial flagellar hook-filament junction
To be Published
2DPY
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BU of 2dpy by Molmil
Crystal structure of the flagellar type III ATPase FliI
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Flagellum-specific ATP synthase
Authors:Imada, K, Namba, K, Minamino, T.
Deposit date:2006-05-18
Release date:2006-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural similarity between the flagellar type III ATPase FliI and F1-ATPase subunits
Proc.Natl.Acad.Sci.Usa, 104, 2007
3AJW
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BU of 3ajw by Molmil
Structure of FliJ, a soluble component of flagellar type III export apparatus
Descriptor: Flagellar fliJ protein, MERCURY (II) ION
Authors:Imada, K, Ibuki, T, Minamino, T, Namba, K.
Deposit date:2010-06-23
Release date:2011-02-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Common architecture of the flagellar type III protein export apparatus and F- and V-type ATPases
Nat.Struct.Mol.Biol., 18, 2011
3A5I
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BU of 3a5i by Molmil
Structure of the cytoplasmic domain of FlhA
Descriptor: Flagellar biosynthesis protein flhA
Authors:Imada, K, Saijo-Hamano, Y, Shimada, M, Namba, K.
Deposit date:2009-08-07
Release date:2010-03-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the cytoplasmic domain of FlhA and implication for flagellar type III protein export
Mol.Microbiol., 76, 2010
3AJC
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BU of 3ajc by Molmil
Structure of the MC domain of FliG (PEV), a CW-biased mutant
Descriptor: Flagellar motor switch protein fliG
Authors:Imada, K, Minamino, T, Kinoshita, M, Namba, K.
Deposit date:2010-05-27
Release date:2011-05-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insight into the rotational switching mechanism of the bacterial flagellar motor
Plos Biol., 9, 2011
2ZVZ
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BU of 2zvz by Molmil
Structure of the periplasmic domain of MotB from Salmonella (crystal form III)
Descriptor: Chemotaxis protein motB
Authors:Imada, K, Kojima, S, Namba, K, Homma, S.
Deposit date:2008-11-26
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB
Mol.Microbiol., 73, 2009
2ZF8
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BU of 2zf8 by Molmil
Crystal structure of MotY
Descriptor: Component of sodium-driven polar flagellar motor
Authors:Imada, K, Kojima, S, Namba, K, Homma, M.
Deposit date:2007-12-25
Release date:2008-07-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Insights into the stator assembly of the Vibrio flagellar motor from the crystal structure of MotY
Proc.Natl.Acad.Sci.Usa, 105, 2008
2ZOV
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BU of 2zov by Molmil
Structure of the periplasmic domain of MotB from Salmonella (crystal form I)
Descriptor: Chemotaxis protein motB
Authors:Imada, K, Kojima, S, Namba, K, Homma, M.
Deposit date:2008-06-09
Release date:2009-06-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB
Mol.Microbiol., 73, 2009
3ADY
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BU of 3ady by Molmil
Crystal structure of DotD from Legionella
Descriptor: DotD
Authors:Imada, K, Nakano, N, Kubori, T, Kinoshita, M, Nagai, H.
Deposit date:2010-01-29
Release date:2010-11-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Legionella DotD: insights into the relationship between type IVB and type II/III secretion systems
Plos Pathog., 6, 2010
2D4U
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BU of 2d4u by Molmil
Crystal Structure of the ligand binding domain of the bacterial serine chemoreceptor Tsr
Descriptor: Methyl-accepting chemotaxis protein I
Authors:Imada, K, Tajima, H, Namba, K, Sakuma, M, Homma, M, Kawagishi, I.
Deposit date:2005-10-24
Release date:2006-11-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Ligand specificity determined by differentially arranged common ligand-binding residues in the bacterial amino acid chemoreceptors Tsr and Tar.
J.Biol.Chem., 2011
3W0E
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BU of 3w0e by Molmil
Structure of elastase inhibitor AFUEI (crystal form II)
Descriptor: Elastase inhibitor AFUEI
Authors:Imada, K, Sakuma, M, Okumura, Y, Ogawa, K, Nikai, T, Homma, M.
Deposit date:2012-10-29
Release date:2013-05-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray Structure Analysis and Characterization of AFUEI, an Elastase Inhibitor from Aspergillus fumigatus
J.Biol.Chem., 288, 2013
3W0D
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BU of 3w0d by Molmil
Structure of elastase inhibitor AFUEI (cyrstal form I)
Descriptor: Elastase inhibitor AFUEI
Authors:Imada, K, Sakuma, M, Okumura, Y, Ogawa, K, Nikai, T, Homma, M.
Deposit date:2012-10-29
Release date:2013-05-15
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray Structure Analysis and Characterization of AFUEI, an Elastase Inhibitor from Aspergillus fumigatus
J.Biol.Chem., 288, 2013
3W1D
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BU of 3w1d by Molmil
Structure of a pressure sensitive YFP variant YFP-G3
Descriptor: Green Fluorescent protein
Authors:Imada, K, Yoshizawa, K, Kinoshita, M, Watanabe, T.M.
Deposit date:2012-11-14
Release date:2013-10-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure.
Plos One, 8, 2013
3W1C
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BU of 3w1c by Molmil
Structure of a pressure sensitive YFP variant YFP-G1
Descriptor: Green Fluorescent protein
Authors:Imada, K, Yoshizawa, K, Kinoshita, M, Watanabe, T.M.
Deposit date:2012-11-14
Release date:2013-10-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure.
Plos One, 8, 2013
5H72
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BU of 5h72 by Molmil
Structure of the periplasmic domain of FliP
Descriptor: Flagellar biosynthetic protein FliP
Authors:Fukumura, T, Kawaguchi, T, Saijo-Hamano, Y, Namba, K, Minamino, T, Imada, K.
Deposit date:2016-11-16
Release date:2017-08-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Assembly and stoichiometry of the core structure of the bacterial flagellar type III export gate complex
PLoS Biol., 15, 2017
5AVE
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BU of 5ave by Molmil
The ligand binding domain of Mlp37 with serine
Descriptor: Methyl-accepting chemotaxis (MCP) signaling domain protein, SERINE
Authors:Takahashi, Y, Sumita, K, Uchida, Y, Nishiyama, S, Kawagishi, I, Imada, K.
Deposit date:2015-06-15
Release date:2016-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of a Vibrio cholerae chemoreceptor that senses taurine and amino acids as attractants
Sci Rep, 6, 2016
8GQY
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BU of 8gqy by Molmil
CryoEM structure of pentameric MotA from Aquifex aeolicus
Descriptor: Motility protein A
Authors:Nishikino, T, Takekawa, N, Kishikawa, J, Hirose, M, Onoe, S, Kato, T, Imada, K.
Deposit date:2022-08-31
Release date:2022-10-26
Last modified:2022-11-09
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of MotA, a flagellar stator protein, from hyperthermophile.
Biochem.Biophys.Res.Commun., 631, 2022
1VGL
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BU of 1vgl by Molmil
Crystal structure of tetrameric KaiB from T.elongatus BP-1
Descriptor: Circadian clock protein kaiB, MERCURY (II) ION
Authors:Iwase, R, Imada, K, Hayashi, F, Uzumaki, T, Namba, K, Ishiura, M.
Deposit date:2004-04-27
Release date:2005-08-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Functionally important substructures of circadian clock protein KaiB in a unique tetramer complex.
J.Biol.Chem., 280, 2005

 

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