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6LHR
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BU of 6lhr by Molmil
Crystal structure of the complex between Vesicle Amine Transport-1 and NADP
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Synaptic vesicle membrane protein VAT-1 homolog
Authors:Hakoshima, T, Kim, S.-Y, Mori, T.
Deposit date:2019-12-09
Release date:2021-01-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structural insights into vesicle amine transport-1 (VAT-1) as a member of the NADPH-dependent quinone oxidoreductase family.
Sci Rep, 11, 2021
6LII
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BU of 6lii by Molmil
A quinone oxidoreductase
Descriptor: Synaptic vesicle membrane protein VAT-1 homolog
Authors:Hakoshima, T, Kim, S.-Y, Mori, T.
Deposit date:2019-12-11
Release date:2021-01-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into vesicle amine transport-1 (VAT-1) as a member of the NADPH-dependent quinone oxidoreductase family.
Sci Rep, 11, 2021
1A0B
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BU of 1a0b by Molmil
HISTIDINE-CONTAINING PHOSPHOTRANSFER DOMAIN OF ARCB FROM ESCHERICHIA COLI
Descriptor: AEROBIC RESPIRATION CONTROL SENSOR PROTEIN ARCB, ZINC ION
Authors:Kato, M, Mizuno, T, Shimizu, T, Hakoshima, T.
Deposit date:1997-11-27
Release date:1998-03-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Insights into multistep phosphorelay from the crystal structure of the C-terminal HPt domain of ArcB.
Cell(Cambridge,Mass.), 88, 1997
1BDJ
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BU of 1bdj by Molmil
COMPLEX STRUCTURE OF HPT DOMAIN AND CHEY
Descriptor: AEROBIC RESPIRATION CONTROL SENSOR PROTEIN ARCB, CHEY, SULFATE ION
Authors:Kato, M, Mizuno, T, Shimizu, T, Hakoshima, T.
Deposit date:1998-05-10
Release date:1999-05-11
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structure of the histidine-containing phosphotransfer (HPt) domain of the anaerobic sensor protein ArcB complexed with the chemotaxis response regulator CheY.
Acta Crystallogr.,Sect.D, 55, 1999
1A0A
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BU of 1a0a by Molmil
PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO4/DNA COMPLEX
Descriptor: DNA (5'-D(*CP*TP*AP*GP*TP*CP*CP*CP*AP*CP*GP*TP*GP*TP*GP*AP*G )-3'), DNA (5'-D(*CP*TP*CP*AP*CP*AP*CP*GP*TP*GP*GP*GP*AP*CP*TP*AP*G )-3'), PROTEIN (PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO4)
Authors:Shimizu, T, Toumoto, A, Ihara, K, Shimizu, M, Kyogoku, Y, Ogawa, N, Oshima, Y, Hakoshima, T.
Deposit date:1997-11-27
Release date:1998-03-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of PHO4 bHLH domain-DNA complex: flanking base recognition.
EMBO J., 16, 1997
1A2B
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BU of 1a2b by Molmil
HUMAN RHOA COMPLEXED WITH GTP ANALOGUE
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, TRANSFORMING PROTEIN RHOA
Authors:Ihara, K, Muraguchi, S, Kato, M, Shimizu, T, Shirakawa, M, Kuroda, S, Kaibuchi, K, Hakoshima, T.
Deposit date:1997-12-26
Release date:1998-06-17
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of human RhoA in a dominantly active form complexed with a GTP analogue.
J.Biol.Chem., 273, 1998
4ZKF
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BU of 4zkf by Molmil
Crystal structure of human phosphodiesterase 12
Descriptor: 2',5'-phosphodiesterase 12, MAGNESIUM ION
Authors:Kim, S.Y, Kohno, T, Mori, T, Kitano, K, Hakoshima, T.
Deposit date:2015-04-30
Release date:2015-06-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of human phosphodiesterase
To Be Published
4P9T
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BU of 4p9t by Molmil
Structure of the free form of the N-terminal VH1 domain of monomeric alpha-catenin
Descriptor: 1,2-ETHANEDIOL, Catenin alpha-2, DI(HYDROXYETHYL)ETHER, ...
Authors:Shibahara, T, Hirano, Y, Hakoshima, T.
Deposit date:2014-04-04
Release date:2015-04-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the free form of the N-terminal VH1 domain of monomeric alpha-catenin.
Febs Lett., 589, 2015
1NPM
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BU of 1npm by Molmil
NEUROPSIN, A SERINE PROTEASE EXPRESSED IN THE LIMBIC SYSTEM OF MOUSE BRAIN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, NEUROPSIN
Authors:Kishi, T, Kato, M, Shimizu, T, Kato, K, Matsumoto, K, Yoshida, S, Shiosaka, S, Hakoshima, T.
Deposit date:1998-01-07
Release date:1999-03-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of neuropsin, a hippocampal protease involved in kindling epileptogenesis.
J.Biol.Chem., 274, 1999
2YVC
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BU of 2yvc by Molmil
Crystal structure of the Radixin FERM domain complexed with the NEP cytoplasmic tail
Descriptor: Neprilysin, Radixin
Authors:Terawaki, S, Kitano, K, Hakoshima, T.
Deposit date:2007-04-11
Release date:2007-04-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for type II membrane protein binding by ERM proteins revealed by the radixin-neutral endopeptidase 24.11 (NEP) complex
J.Biol.Chem., 282, 2007
1GD2
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BU of 1gd2 by Molmil
CRYSTAL STRUCTURE OF BZIP TRANSCRIPTION FACTOR PAP1 BOUND TO DNA
Descriptor: DNA (5'-D(*AP*GP*GP*TP*TP*AP*CP*GP*TP*AP*AP*CP*C)-3'), TRANSCRIPTION FACTOR PAP1
Authors:Fujii, Y, Shimizu, T, Toda, T, Yanagida, M, Hakoshima, T.
Deposit date:2000-08-25
Release date:2000-10-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the diversity of DNA recognition by bZIP transcription factors.
Nat.Struct.Biol., 7, 2000
1GC7
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BU of 1gc7 by Molmil
CRYSTAL STRUCTURE OF THE RADIXIN FERM DOMAIN
Descriptor: RADIXIN
Authors:Hamada, K, Shimizu, T, Matsui, T, Tsukita, S, Tsukita, S, Hakoshima, T.
Deposit date:2000-07-21
Release date:2000-09-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of the membrane-targeting and unmasking mechanisms of the radixin FERM domain.
EMBO J., 19, 2000
1GC6
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BU of 1gc6 by Molmil
CRYSTAL STRUCTURE OF THE RADIXIN FERM DOMAIN COMPLEXED WITH INOSITOL-(1,4,5)-TRIPHOSPHATE
Descriptor: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, RADIXIN
Authors:Hamada, K, Shimizu, T, Matsui, T, Tsukita, S, Tsukita, S, Hakoshima, T.
Deposit date:2000-07-21
Release date:2000-09-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of the membrane-targeting and unmasking mechanisms of the radixin FERM domain.
EMBO J., 19, 2000
1J19
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BU of 1j19 by Molmil
Crystal structure of the radxin FERM domain complexed with the ICAM-2 cytoplasmic peptide
Descriptor: 16-mer peptide from Intercellular adhesion molecule-2, radixin
Authors:Hamada, K, Shimizu, T, Yonemura, S, Tsukita, S, Tsukita, S, Hakoshima, T.
Deposit date:2002-12-02
Release date:2003-03-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of adhesion-molecule recognition by ERM proteins revealed by the crystal structure of the radixin-ICAM-2 complex
EMBO J., 22, 2003
1CXZ
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BU of 1cxz by Molmil
CRYSTAL STRUCTURE OF HUMAN RHOA COMPLEXED WITH THE EFFECTOR DOMAIN OF THE PROTEIN KINASE PKN/PRK1
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, PROTEIN (HIS-TAGGED TRANSFORMING PROTEIN RHOA(0-181)), ...
Authors:Maesaki, R, Ihara, K, Shimizu, T, Kuroda, S, Kaibuchi, K, Hakoshima, T.
Deposit date:1999-08-31
Release date:1999-10-08
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structural basis of Rho effector recognition revealed by the crystal structure of human RhoA complexed with the effector domain of PKN/PRK1.
Mol.Cell, 4, 1999
2RRD
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BU of 2rrd by Molmil
Structure of HRDC domain from human Bloom syndrome protein, BLM
Descriptor: HRDC domain from Bloom syndrome protein
Authors:Sato, A, Mishima, M, Nagai, A, Kim, S.Y, Ito, Y, Hakoshima, T, Jee, J.G, Kitano, K.
Deposit date:2010-07-19
Release date:2010-09-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the HRDC domain of human Bloom syndrome protein BLM
J.Biochem., 148, 2010
2IRF
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BU of 2irf by Molmil
CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX.
Descriptor: DNA (5'-D(*TP*TP*CP*AP*CP*TP*TP*TP*CP*AP*CP*(5IU)P*T)-3'), DNA (5'-D(P*AP*AP*GP*TP*GP*AP*AP*AP*GP*(5IU)P*GP*A)-3'), INTERFERON REGULATORY FACTOR 2, ...
Authors:Fujii, Y, Shimizu, T, Kusumoto, M, Kyogoku, Y, Taniguchi, T, Hakoshima, T.
Deposit date:1999-05-30
Release date:1999-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of an IRF-DNA complex reveals novel DNA recognition and cooperative binding to a tandem repeat of core sequences.
EMBO J., 18, 1999
1QQ2
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BU of 1qq2 by Molmil
CRYSTAL STRUCTURE OF A MAMMALIAN 2-CYS PEROXIREDOXIN, HBP23.
Descriptor: CHLORIDE ION, THIOREDOXIN PEROXIDASE 2
Authors:Hirotsu, S, Abe, Y, Okada, K, Nagahara, N, Hori, H, Nishino, T, Hakoshima, T.
Deposit date:1999-06-10
Release date:1999-10-29
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a multifunctional 2-Cys peroxiredoxin heme-binding protein 23 kDa/proliferation-associated gene product.
Proc.Natl.Acad.Sci.USA, 96, 1999
1DPF
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BU of 1dpf by Molmil
CRYSTAL STRUCTURE OF A MG-FREE FORM OF RHOA COMPLEXED WITH GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, RHOA
Authors:Shimizu, T, Ihara, K, Maesaki, R, Kuroda, S, Kaibuchi, K, Hakoshima, T.
Deposit date:1999-12-27
Release date:2000-06-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:An open conformation of switch I revealed by the crystal structure of a Mg2+-free form of RHOA complexed with GDP. Implications for the GDP/GTP exchange mechanism.
J.Biol.Chem., 275, 2000
1ISN
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BU of 1isn by Molmil
Crystal structure of merlin FERM domain
Descriptor: merlin
Authors:Shimizu, T, Seto, A, Maita, N, Hamada, K, Tsukita, S, Tsukita, S, Hakoshima, T.
Deposit date:2001-12-13
Release date:2002-04-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for neurofibromatosis type 2. Crystal structure of the merlin FERM domain.
J.Biol.Chem., 277, 2002
5B5V
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BU of 5b5v by Molmil
Structure of full-length MOB1b
Descriptor: CHLORIDE ION, MOB kinase activator 1B, ZINC ION
Authors:KIM, S.-Y, Tachioka, Y, Mori, T, Hakoshima, T.
Deposit date:2016-05-24
Release date:2016-07-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.193 Å)
Cite:Structural basis for autoinhibition and its relief of MOB1 in the Hippo pathway
Sci Rep, 6, 2016
5B3H
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BU of 5b3h by Molmil
The crystal structure of the JACKDAW/IDD10 bound to the heterodimeric SHR-SCR complex
Descriptor: Protein SCARECROW, Protein SHORT-ROOT, ZINC ION, ...
Authors:Hirano, Y, Suyama, T, Nakagawa, M, Hakoshima, T.
Deposit date:2016-02-29
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD
Nat Plants, 3, 2017
5B5W
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BU of 5b5w by Molmil
Crystal structure of MOB1-LATS1 NTR domain complex
Descriptor: MOB kinase activator 1B, Serine/threonine-protein kinase LATS1, ZINC ION
Authors:KIM, S.-Y, Tachioka, Y, Mori, T, Hakoshima, T.
Deposit date:2016-05-24
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.957 Å)
Cite:Structural basis for autoinhibition and its relief of MOB1 in the Hippo pathway
Sci Rep, 6, 2016
5B6B
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BU of 5b6b by Molmil
Complex of LATS1 and phosphomimetic MOB1b
Descriptor: CHLORIDE ION, MOB kinase activator 1B, Serine/threonine-protein kinase LATS1, ...
Authors:KIM, S.-Y, Tachioka, Y, Mori, T, Hakoshima, T.
Deposit date:2016-05-26
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.536 Å)
Cite:Structural basis for autoinhibition and its relief of MOB1 in the Hippo pathway
Sci Rep, 6, 2016
5B3G
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BU of 5b3g by Molmil
The crystal structure of the heterodimer of SHORT-ROOT and SCARECROW GRAS domains
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
Authors:Hirano, Y, Nakagawa, M, Hakoshima, T.
Deposit date:2016-02-29
Release date:2017-03-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD
Nat Plants, 3, 2017

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