Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1ATJ
DownloadVisualize
BU of 1atj by Molmil
RECOMBINANT HORSERADISH PEROXIDASE C1A
Descriptor: CALCIUM ION, PEROXIDASE C1A, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gajhede, M, Schuller, D.J, Henriksen, A, Smith, A.T, Poulos, T.L.
Deposit date:1997-08-14
Release date:1998-02-04
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of horseradish peroxidase C at 2.15 A resolution.
Nat.Struct.Biol., 4, 1997
1PSP
DownloadVisualize
BU of 1psp by Molmil
PANCREATIC SPASMOLYTIC POLYPEPTIDE: FIRST THREE-DIMENSIONAL STRUCTURE OF A MEMBER OF THE MAMMALIAN TREFOIL FAMILY OF PEPTIDES
Descriptor: PANCREATIC SPASMOLYTIC POLYPEPTIDE
Authors:Gajhede, M, Petersen, T.N, Henriksen, A, Petersen, J.F.W, Dauter, Z, Wilson, K.S, Thim, L.
Deposit date:1994-01-05
Release date:1994-04-30
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Pancreatic spasmolytic polypeptide: first three-dimensional structure of a member of the mammalian trefoil family of peptides.
Structure, 1, 1993
1BV1
DownloadVisualize
BU of 1bv1 by Molmil
BIRCH POLLEN ALLERGEN BET V 1
Descriptor: BET V 1
Authors:Gajhede, M, Osmark, P, Poulsen, F.M, Ipsen, H, Larson, J.N, Joostvan, R.J, Schou, C, Lowenstein, H, Spangfort, M.D.
Deposit date:1997-07-08
Release date:1997-09-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray and NMR structure of Bet v 1, the origin of birch pollen allergy.
Nat.Struct.Biol., 3, 1996
1BTV
DownloadVisualize
BU of 1btv by Molmil
STRUCTURE OF BET V 1, NMR, 20 STRUCTURES
Descriptor: BET V 1
Authors:Osmark, P, Poulsen, F.M, Gajhede, M, Larsen, J.N, Spangfort, M.D.
Deposit date:1997-01-30
Release date:1997-08-12
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:X-ray and NMR structure of Bet v 1, the origin of birch pollen allergy.
Nat.Struct.Biol., 3, 1996
6ATJ
DownloadVisualize
BU of 6atj by Molmil
RECOMBINANT HORSERADISH PEROXIDASE C COMPLEX WITH FERULIC ACID
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, CALCIUM ION, PEROXIDASE C1A, ...
Authors:Henriksen, A, Smith, A.T, Gajhede, M.
Deposit date:1999-04-23
Release date:2000-01-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structures of the horseradish peroxidase C-ferulic acid complex and the ternary complex with cyanide suggest how peroxidases oxidize small phenolic substrates.
J.Biol.Chem., 274, 1999
8A7E
DownloadVisualize
BU of 8a7e by Molmil
PAPP-A dimer in complex with its inhibitor STC2
Descriptor: CALCIUM ION, Pappalysin-1, Stanniocalcin-2, ...
Authors:Kobbero, S.D, Gajhede, M, Mirza, O.A, Boesen, T, Oxvig, C.
Deposit date:2022-06-20
Release date:2022-11-02
Method:ELECTRON MICROSCOPY (5.02 Å)
Cite:Structure of the proteolytic enzyme PAPP-A with the endogenous inhibitor stanniocalcin-2 reveals its inhibitory mechanism.
Nat Commun, 13, 2022
8A7D
DownloadVisualize
BU of 8a7d by Molmil
Partial dimer complex of PAPP-A and its inhibitor STC2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Pappalysin-1, ...
Authors:Kobbero, S.D, Gajhede, M, Mirza, O.A, Boesen, T, Oxvig, C.
Deposit date:2022-06-20
Release date:2022-11-02
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Structure of the proteolytic enzyme PAPP-A with the endogenous inhibitor stanniocalcin-2 reveals its inhibitory mechanism.
Nat Commun, 13, 2022
6RUQ
DownloadVisualize
BU of 6ruq by Molmil
Structure of GluA2cryst in complex the antagonist ZK200775 and the negative allosteric modulator GYKI53655 at 4.65 A resolution
Descriptor: (8R)-5-(4-aminophenyl)-N,8-dimethyl-8,9-dihydro-2H,7H-[1,3]dioxolo[4,5-h][2,3]benzodiazepine-7-carboxamide, Glutamate receptor 2, beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Krintel, C, Venskutonyte, R, Mirza, O.A, Gajhede, M, Kastrup, J.S.
Deposit date:2019-05-28
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (4.65 Å)
Cite:Binding of a negative allosteric modulator and competitive antagonist can occur simultaneously at the ionotropic glutamate receptor GluA2.
Febs J., 288, 2021
6F6D
DownloadVisualize
BU of 6f6d by Molmil
The catalytic domain of KDM6B in complex with H3(17-33)K18IA21M peptide
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, Histone 3 peptide H3(17-33)K18IA21M, ...
Authors:Jones, S.E, Olsen, L, Gajhede, M.
Deposit date:2017-12-05
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.81810677 Å)
Cite:Structural Basis of Histone Demethylase KDM6B Histone 3 Lysine 27 Specificity.
Biochemistry, 57, 2018
1ZS2
DownloadVisualize
BU of 1zs2 by Molmil
Amylosucrase Mutant E328Q in a ternary complex with sucrose and maltoheptaose
Descriptor: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, amylosucrase, ...
Authors:Skov, L.K, Mirza, O, Sprogoe, D, van der Veen, B.A, Remaud-Simeon, M, Albenne, C, Monsan, P, Gajhede, M.
Deposit date:2005-05-23
Release date:2006-05-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of the Glu328Gln mutant of Neisseria polysaccharea amylosucrase in complex with sucrose and maltoheptaose
BIOCATAL.BIOTRANSFOR., 24, 2006
5OY3
DownloadVisualize
BU of 5oy3 by Molmil
The structural basis of the histone demethylase KDM6B histone 3 lysine 27 specificity
Descriptor: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, FE (III) ION, ...
Authors:Jones, S.E, Olsen, L, Gajhede, M.
Deposit date:2017-09-07
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.136 Å)
Cite:Structural Basis of Histone Demethylase KDM6B Histone 3 Lysine 27 Specificity.
Biochemistry, 57, 2018
2ATJ
DownloadVisualize
BU of 2atj by Molmil
RECOMBINANT HORSERADISH PEROXIDASE COMPLEX WITH BENZHYDROXAMIC ACID
Descriptor: BENZHYDROXAMIC ACID, CALCIUM ION, PEROXIDASE C1A, ...
Authors:Henriksen, A, Schuller, D.J, Gajhede, M.
Deposit date:1997-08-19
Release date:1998-01-28
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural interactions between horseradish peroxidase C and the substrate benzhydroxamic acid determined by X-ray crystallography.
Biochemistry, 37, 1998
4ATJ
DownloadVisualize
BU of 4atj by Molmil
DISTAL HEME POCKET MUTANT (H42E) OF RECOMBINANT HORSERADISH PEROXIDASE IN COMPLEX WITH BENZHYDROXAMIC ACID
Descriptor: BENZHYDROXAMIC ACID, CALCIUM ION, PROTEIN (PEROXIDASE C1A), ...
Authors:Meno, K, Jennings, S, Smith, A.T, Henriksen, A, Gajhede, M.
Deposit date:1999-04-19
Release date:2002-10-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis of the two horseradish peroxidase catalytic residue variants H42E and R38S/H42E: implications for the catalytic cycle.
Acta Crystallogr.,Sect.D, 58, 2002
1GW2
DownloadVisualize
BU of 1gw2 by Molmil
RECOMBINANT HORSERADISH PEROXIDASE C1A THR171SER IN COMPLEX WITH FERULIC ACID
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, CALCIUM ION, PEROXIDASE C1A, ...
Authors:Henriksen, A, Meno, K, Brissett, N, Gajhede, M.
Deposit date:2002-03-03
Release date:2003-03-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Hrpc Heme Crevice Architecture
To be Published
3GBA
DownloadVisualize
BU of 3gba by Molmil
X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with dysiherbaine at 1.35A resolution
Descriptor: (2R,3aR,6S,7R,7aR)-2-[(2S)-2-amino-2-carboxyethyl]-6-hydroxy-7-(methylamino)hexahydro-2H-furo[3,2-b]pyran-2-carboxylic acid, CHLORIDE ION, GLYCEROL, ...
Authors:Frydenvang, K, Naur, P, Gajhede, M, Kastrup, J.S.
Deposit date:2009-02-19
Release date:2009-03-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Full Domain Closure of the Ligand-binding Core of the Ionotropic Glutamate Receptor iGluR5 Induced by the High Affinity Agonist Dysiherbaine and the Functional Antagonist 8,9-Dideoxyneodysiherbaine
J.Biol.Chem., 284, 2009
3GBB
DownloadVisualize
BU of 3gbb by Molmil
X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with MSVIII-19 at 2.10A resolution
Descriptor: (2R,3aR,7aR)-2-[(2S)-2-amino-3-hydroxy-3-oxo-propyl]-3,3a,5,6,7,7a-hexahydrofuro[4,5-b]pyran-2-carboxylic acid, Glutamate receptor, ionotropic kainate 1
Authors:Frydenvang, K, Naur, P, Gajhede, M, Kastrup, J.S.
Deposit date:2009-02-19
Release date:2009-03-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Full Domain Closure of the Ligand-binding Core of the Ionotropic Glutamate Receptor iGluR5 Induced by the High Affinity Agonist Dysiherbaine and the Functional Antagonist 8,9-Dideoxyneodysiherbaine
J.Biol.Chem., 284, 2009
1GWU
DownloadVisualize
BU of 1gwu by Molmil
RECOMBINANT HORSERADISH PEROXIDASE C1A ALA140GLY
Descriptor: ACETATE ION, CALCIUM ION, PEROXIDASE C1A, ...
Authors:Henriksen, A, Brissett, N, Gajhede, M.
Deposit date:2002-03-25
Release date:2003-03-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Hrpc Heme Crevice Architecture
To be Published
5CC2
DownloadVisualize
BU of 5cc2 by Molmil
STRUCTURE OF THE LIGAND-BINDING DOMAIN OF THE IONOTROPIC GLUTAMATE RECEPTOR-LIKE GLUD2 IN COMPLEX WITH 7-CKA
Descriptor: 7-Chlorokynurenic acid, CHLORIDE ION, GLYCEROL, ...
Authors:Naur, P, Gajhede, M, Kastrup, J.S.
Deposit date:2015-07-01
Release date:2015-12-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Pharmacology and Structural Analysis of Ligand Binding to the Orthosteric Site of Glutamate-Like GluD2 Receptors.
Mol.Pharmacol., 89, 2016
2ANJ
DownloadVisualize
BU of 2anj by Molmil
Crystal Structure of the Glur2 Ligand Binding Core (S1S2J-Y450W) Mutant in Complex With the Partial Agonist Kainic Acid at 2.1 A Resolution
Descriptor: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, Glutamate receptor 2
Authors:Holm, M.M, Naur, P, Vestergaard, B, Geballe, M.T, Gajhede, M, Kastrup, J.S, Traynelis, S.F, Egebjerg, J.
Deposit date:2005-08-11
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Binding Site Tyrosine Shapes Desensitization Kinetics and Agonist Potency at GluR2: a mutagenic, kinetic, and crystallographic study
J.Biol.Chem., 280, 2005
4ZG1
DownloadVisualize
BU of 4zg1 by Molmil
Crystal structure of a nanobody raised against KDM5B
Descriptor: NB17
Authors:Wiuf, A, Kristensen, O, Gajhede, M.
Deposit date:2015-04-22
Release date:2015-05-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and binding properties of a cameloid nanobody raised against KDM5B.
Acta Crystallogr.,Sect.F, 71, 2015
3ATJ
DownloadVisualize
BU of 3atj by Molmil
HEME LIGAND MUTANT OF RECOMBINANT HORSERADISH PEROXIDASE IN COMPLEX WITH BENZHYDROXAMIC ACID
Descriptor: BENZHYDROXAMIC ACID, CALCIUM ION, PROTEIN (HORSERADISH PEROXIDASE C1A), ...
Authors:Meno, K, White, C.G, Smith, A.T, Gajhede, M.
Deposit date:1998-12-16
Release date:1999-04-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and Catalytical Implications of a F221M Mutation in the Proximal Pocket of Horseradish Peroxidase C (HRP C)
To be Published
7ATJ
DownloadVisualize
BU of 7atj by Molmil
RECOMBINANT HORSERADISH PEROXIDASE C1A COMPLEX WITH CYANIDE AND FERULIC ACID
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, CALCIUM ION, CYANIDE ION, ...
Authors:Henriksen, A, Smith, A.T, Gajhede, M.
Deposit date:1999-04-26
Release date:2000-01-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:The structures of the horseradish peroxidase C-ferulic acid complex and the ternary complex with cyanide suggest how peroxidases oxidize small phenolic substrates.
J.Biol.Chem., 274, 1999
4UM1
DownloadVisualize
BU of 4um1 by Molmil
Engineered Ls-AChBP with alpha4-alpha4 binding pocket in complex with NS3573
Descriptor: 1-(5-ethoxypyridin-3-yl)-1,4-diazepane, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINE-BINDING PROTEIN
Authors:Shahsavar, A, Kastrup, J.S, Balle, T, Gajhede, M.
Deposit date:2014-05-14
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Achbp Engineered to Mimic the Alpha4-Alpha4 Binding Pocket in Alpha4Beta2 Nicotinic Acetylcholine Receptors Reveals Interface Specific Interactions Important for Binding and Activity
Mol.Pharmacol., 88, 2015
4UM3
DownloadVisualize
BU of 4um3 by Molmil
Engineered Ls-AChBP with alpha4-alpha4 binding pocket in complex with NS3920
Descriptor: 1-(6-bromopyridin-3-yl)-1,4-diazepane, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINE BINDING PROTEIN, ...
Authors:Shahsavar, A, Kastrup, J.S, Balle, T, Gajhede, M.
Deposit date:2014-05-14
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Achbp Engineered to Mimic the Alpha4-Alpha4 Binding Pocket in Alpha4Beta2 Nicotinic Acetylcholine Receptors Reveals Interface Specific Interactions Important for Binding and Activity
Mol.Pharmacol., 88, 2015
7OFB
DownloadVisualize
BU of 7ofb by Molmil
Keap1 kelch domain bound to a small molecule fragment
Descriptor: DIMETHYL SULFOXIDE, Kelch-like ECH-associated protein 1, SULFATE ION, ...
Authors:Narayanan, D, Bach, A, Gajhede, M.
Deposit date:2021-05-04
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery.
J.Med.Chem., 65, 2022

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon