Author results

1IUN
  • Download 1iun
  • View 1iun
Molmil generated image of 1iun
META-CLEAVAGE PRODUCT HYDROLASE FROM PSEUDOMONAS FLUORESCENS IP01 (CUMD) S103A MUTANT HEXAGONAL
Descriptor:meta-Cleavage product hydrolase, ACETATE ION
Authors:Fushinobu, S., Saku, T., Hidaka, M., Jun, S.-Y., Nojiri, H., Yamane, H., Shoun, H., Omori, T., Wakagi, T.
Deposit date:2002-03-06
Release date:2002-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002
1IUO
  • Download 1iuo
  • View 1iuo
Molmil generated image of 1iuo
META-CLEAVAGE PRODUCT HYDROLASE FROM PSEUDOMONAS FLUORESCENS IP01 (CUMD) S103A MUTANT COMPLEXED WITH ACETATES
Descriptor:meta-Cleavage product hydrolase, ACETATE ION
Authors:Fushinobu, S., Saku, T., Hidaka, M., Jun, S.-Y., Nojiri, H., Yamane, H., Shoun, H., Omori, T., Wakagi, T.
Deposit date:2002-03-06
Release date:2002-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002
1IUP
  • Download 1iup
  • View 1iup
Molmil generated image of 1iup
META-CLEAVAGE PRODUCT HYDROLASE FROM PSEUDOMONAS FLUORESCENS IP01 (CUMD) S103A MUTANT COMPLEXED WITH ISOBUTYRATES
Descriptor:meta-Cleavage product hydrolase, 2-METHYL-PROPIONIC ACID
Authors:Fushinobu, S., Saku, T., Hidaka, M., Jun, S.-Y., Nojiri, H., Yamane, H., Shoun, H., Omori, T., Wakagi, T.
Deposit date:2002-03-06
Release date:2002-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002
1WU4
  • Download 1wu4
  • View 1wu4
Molmil generated image of 1wu4
CRYSTAL STRUCTURE OF REDUCING-END-XYLOSE RELEASING EXO-OLIGOXYLANASE
Descriptor:xylanase Y, NICKEL (II) ION, GLYCEROL
Authors:Fushinobu, S., Hidaka, M., Honda, Y., Wakagi, T., Shoun, H., Kitaoka, M.
Deposit date:2004-12-01
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural Basis for the Specificity of the Reducing End Xylose-releasing Exo-oligoxylanase from Bacillus halodurans C-125
J.Biol.Chem., 280, 2005
1WU5
  • Download 1wu5
  • View 1wu5
Molmil generated image of 1wu5
CRYSTAL STRUCTURE OF REDUCING-END-XYLOSE RELEASING EXO-OLIGOXYLANASE COMPLEXED WITH XYLOSE
Descriptor:xylanase Y, BETA-D-XYLOPYRANOSE, NICKEL (II) ION, ...
Authors:Fushinobu, S., Hidaka, M., Honda, Y., Wakagi, T., Shoun, H., Kitaoka, M.
Deposit date:2004-12-01
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for the Specificity of the Reducing End Xylose-releasing Exo-oligoxylanase from Bacillus halodurans C-125
J.Biol.Chem., 280, 2005
1WU6
  • Download 1wu6
  • View 1wu6
Molmil generated image of 1wu6
CRYSTAL STRUCTURE OF REDUCING-END-XYLOSE RELEASING EXO-OLIGOXYLANASE E70A MUTANT COMPLEXED WITH XYLOBIOSE
Descriptor:xylanase Y, BETA-D-XYLOPYRANOSE, NICKEL (II) ION, ...
Authors:Fushinobu, S., Hidaka, M., Honda, Y., Wakagi, T., Shoun, H., Kitaoka, M.
Deposit date:2004-12-01
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Basis for the Specificity of the Reducing End Xylose-releasing Exo-oligoxylanase from Bacillus halodurans C-125
J.Biol.Chem., 280, 2005
1BK1
  • Download 1bk1
  • View 1bk1
Molmil generated image of 1bk1
ENDO-1,4-BETA-XYLANASE C
Descriptor:ENDO-1,4-B-XYLANASE C
Authors:Fushinobu, S., Ito, K., Konno, M., Wakagi, T., Matsuzawa, H.
Deposit date:1998-07-14
Release date:1999-01-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic and mutational analyses of an extremely acidophilic and acid-stable xylanase: biased distribution of acidic residues and importance of Asp37 for catalysis at low pH.
Protein Eng., 11, 1998
1J30
  • Download 1j30
  • View 1j30
Molmil generated image of 1j30
THE CRYSTAL STRUCTURE OF SULERYTHRIN, A RUBRERYTHRIN-LIKE PROTEIN FROM A STRICTLY AEROBIC AND THERMOACIDIPHILIC ARCHAEON
Descriptor:144aa long hypothetical rubrerythrin, FE (III) ION, ZINC ION, ...
Authors:Fushinobu, S., Shoun, H., Wakagi, T.
Deposit date:2003-01-16
Release date:2003-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure of Sulerythrin, A Rubrerythrin-like Protein from A Strictly Aerobic Archaeon, Sulfolobus tokodaii strain 7, shows unexpected domain swapping
Biochemistry, 42, 2003
1UK6
  • Download 1uk6
  • View 1uk6
Molmil generated image of 1uk6
CRYSTAL STRUCTURE OF A META-CLEAVAGE PRODUCT HYDROLASE (CUMD) COMPLEXED WITH PROPIONATE
Descriptor:2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, PROPANOIC ACID
Authors:Fushinobu, S., Jun, S.-Y., Hidaka, M., Nojiri, H., Yamane, H., Shoun, H., Omori, T., Wakagi, T.
Deposit date:2003-08-19
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products
BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
1UK7
  • Download 1uk7
  • View 1uk7
Molmil generated image of 1uk7
CRYSTAL STRUCTURE OF A META-CLEAVAGE PRODUCT HYDROLASE (CUMD) COMPLEXED WITH N-BUTYRATE
Descriptor:2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, BUTANOIC ACID
Authors:Fushinobu, S., Jun, S.-Y., Hidaka, M., Nojiri, H., Yamane, H., Shoun, H., Omori, T., Wakagi, T.
Deposit date:2003-08-19
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products
BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
1UK8
  • Download 1uk8
  • View 1uk8
Molmil generated image of 1uk8
CRYSTAL STRUCTURE OF A META-CLEAVAGE PRODUCT HYDROLASE (CUMD) COMPLEXED WITH N-VALERATE
Descriptor:2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, PENTANOIC ACID
Authors:Fushinobu, S., Jun, S.-Y., Hidaka, M., Nojiri, H., Yamane, H., Shoun, H., Omori, T., Wakagi, T.
Deposit date:2003-08-19
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products
BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
1UK9
  • Download 1uk9
  • View 1uk9
Molmil generated image of 1uk9
CRYSTAL STRUCTURE OF A META-CLEAVAGE PRODUCT HYDROLASE (CUMD) COMPLEXED WITH ISOVALERATE
Descriptor:2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, ISOVALERIC ACID
Authors:Fushinobu, S., Jun, S.-Y., Hidaka, M., Nojiri, H., Yamane, H., Shoun, H., Omori, T., Wakagi, T.
Deposit date:2003-08-19
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products
BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
1UKA
  • Download 1uka
  • View 1uka
Molmil generated image of 1uka
CRYSTAL STRUCTURE OF A META-CLEAVAGE PRODUCT HYDROLASE (CUMD) COMPLEXED WITH (S)-2-METHYLBUTYRATE
Descriptor:2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, 2-METHYLBUTANOIC ACID
Authors:Fushinobu, S., Jun, S.-Y., Hidaka, M., Nojiri, H., Yamane, H., Shoun, H., Omori, T., Wakagi, T.
Deposit date:2003-08-19
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products
BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
1UKB
  • Download 1ukb
  • View 1ukb
Molmil generated image of 1ukb
CRYSTAL STRUCTURE OF A META-CLEAVAGE PRODUCT HYDROLASE (CUMD) COMPLEXED WITH BENZOATE
Descriptor:2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, BENZOIC ACID
Authors:Fushinobu, S., Jun, S.-Y., Hidaka, M., Nojiri, H., Yamane, H., Shoun, H., Omori, T., Wakagi, T.
Deposit date:2003-08-19
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Series of Crystal Structures of a meta-Cleavage Product Hydrolase from Pseudomonas fluorescens IP01 (CumD) Complexed with Various Cleavage Products
BIOSCI.BIOTECHNOL.BIOCHEM., 69, 2005
3QFY
  • Download 3qfy
  • View 3qfy
Molmil generated image of 3qfy
CRYSTAL STRUCTURE OF CELLVIBRIO GILVUS CELLOBIOSE PHOSPHORYLASE COMPLEXED WITH SULFATE AND ISOFAGOMINE
Descriptor:Cellobiose Phosphorylase, BETA-D-GLUCOSE, SULFATE ION, ...
Authors:Fushinobu, S., Hidaka, M., Hayashi, A.M., Wakagi, T., Shoun, H., Kitaoka, M.
Deposit date:2011-01-24
Release date:2011-09-21
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Interactions between glycoside hydrolase family 94 cellobiose phosphorylase and glucosidase inhibitors
J.Appl.Glyosci., 58, 2011
3QFZ
  • Download 3qfz
  • View 3qfz
Molmil generated image of 3qfz
CRYSTAL STRUCTURE OF CELLVIBRIO GILVUS CELLOBIOSE PHOSPHORYLASE COMPLEXED WITH SULFATE AND 1-DEOXYNOJIRIMYCIN
Descriptor:Cellobiose Phosphorylase, BETA-D-GLUCOSE, SULFATE ION, ...
Authors:Fushinobu, S., Hidaka, M., Hayashi, A.M., Wakagi, T., Shoun, H., Kitaoka, M.
Deposit date:2011-01-24
Release date:2011-09-21
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Interactions between glycoside hydrolase family 94 cellobiose phosphorylase and glucosidase inhibitors
J.Appl.Glyosci., 58, 2011
3QG0
  • Download 3qg0
  • View 3qg0
Molmil generated image of 3qg0
CRYSTAL STRUCTURE OF CELLVIBRIO GILVUS CELLOBIOSE PHOSPHORYLASE COMPLEXED WITH PHOSPHATE AND 1-DEOXYNOJIRIMYCIN
Descriptor:Cellobiose Phosphorylase, BETA-D-GLUCOSE, PHOSPHATE ION, ...
Authors:Fushinobu, S., Hidaka, M., Hayashi, A.M., Wakagi, T., Shoun, H., Kitaoka, M.
Deposit date:2011-01-24
Release date:2011-09-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Interactions between glycoside hydrolase family 94 cellobiose phosphorylase and glucosidase inhibitors
J.Appl.Glyosci., 58, 2011
3R1M
  • Download 3r1m
  • View 3r1m
Molmil generated image of 3r1m
STRUCTURE OF BIFUNCTIONAL FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE/PHOSPHATASE (ALDOLASE FORM)
Descriptor:Putative uncharacterized protein ST0318, 1,3-DIHYDROXYACETONEPHOSPHATE, MAGNESIUM ION, ...
Authors:Fushinobu, S., Nishimasu, H., Hattori, D., Song, H.-J., Wakagi, T.
Deposit date:2011-03-10
Release date:2011-10-12
Last modified:2017-02-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis for the bifunctionality of fructose-1,6-bisphosphate aldolase/phosphatase.
Nature, 478, 2011
3RI8
  • Download 3ri8
  • View 3ri8
Molmil generated image of 3ri8
XYLANASE C FROM ASPERGILLUS KAWACHII D37N MUTANT
Descriptor:Endo-1,4-beta-xylanase 3
Authors:Fushinobu, S., Uno, T., Kitaoka, M., Hayashi, K., Matsuzawa, H., Wakagi, T.
Deposit date:2011-04-13
Release date:2011-10-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mutational analysis of fungal family 11 xylanases on pH optimum determination
J.APPL.GLYOSCI., 58, 2011
3RI9
  • Download 3ri9
  • View 3ri9
Molmil generated image of 3ri9
XYLANASE C FROM ASPERGILLUS KAWACHII F131W MUTANT
Descriptor:Endo-1,4-beta-xylanase 3
Authors:Fushinobu, S., Uno, T., Kitaoka, M., Hayashi, K., Matsuzawa, H., Wakagi, T.
Deposit date:2011-04-13
Release date:2011-09-21
Last modified:2011-10-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mutational analysis of fungal family 11 xylanases on pH optimum determination
J.APPL.GLYOSCI., 58, 2011
2DEP
  • Download 2dep
  • View 2dep
Molmil generated image of 2dep
CRYSTAL STRUCTURE OF XYLANASE B FROM CLOSTRIDIUM STERCORARIUM F9
Descriptor:Thermostable celloxylanase
Authors:Fushinobu, S., Nishimoto, M., Miyanaga, A., Kitaoka, M., Hayashi, K.
Deposit date:2006-02-16
Release date:2007-01-16
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular anatomy of the alkaliphilic xylanase from Bacillus halodurans C-125
To be Published
2DRO
  • Download 2dro
  • View 2dro
Molmil generated image of 2dro
CRYSTAL STRUCTURE OF REDUCING-END-XYLOSE RELEASING EXO-OLIGOXYLANASE D263C MUTANT
Descriptor:Xylanase Y, NICKEL (II) ION, GLYCEROL
Authors:Fushinobu, S., Hidaka, M., Honda, Y., Wakagi, T., Shoun, H., Kitaoka, M.
Deposit date:2006-06-12
Release date:2006-06-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural explanation for the acquisition of glycosynthase activity
J.Biochem., 2009
2DRQ
  • Download 2drq
  • View 2drq
Molmil generated image of 2drq
CRYSTAL STRUCTURE OF REDUCING-END-XYLOSE RELEASING EXO-OLIGOXYLANASE D263G MUTANT
Descriptor:Xylanase Y, NICKEL (II) ION, GLYCEROL
Authors:Fushinobu, S., Hidaka, M., Honda, Y., Wakagi, T., Shoun, H., Kitaoka, M.
Deposit date:2006-06-12
Release date:2006-06-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural explanation for the acquisition of glycosynthase activity
J.Biochem., 2009
2DRR
  • Download 2drr
  • View 2drr
Molmil generated image of 2drr
CRYSTAL STRUCTURE OF REDUCING-END-XYLOSE RELEASING EXO-OLIGOXYLANASE D263N MUTANT
Descriptor:Xylanase Y, NICKEL (II) ION, GLYCEROL
Authors:Fushinobu, S., Hidaka, M., Honda, Y., Wakagi, T., Shoun, H., Kitaoka, M.
Deposit date:2006-06-12
Release date:2006-06-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural explanation for the acquisition of glycosynthase activity
J.Biochem., 2009
2DRS
  • Download 2drs
  • View 2drs
Molmil generated image of 2drs
CRYSTAL STRUCTURE OF REDUCING-END-XYLOSE RELEASING EXO-OLIGOXYLANASE D263S MUTANT
Descriptor:Xylanase Y, NICKEL (II) ION, GLYCEROL
Authors:Fushinobu, S., Hidaka, M., Honda, Y., Wakagi, T., Shoun, H., Kitaoka, M.
Deposit date:2006-06-12
Release date:2006-06-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural explanation for the acquisition of glycosynthase activity
J.Biochem., 2009