Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3FRL
DownloadVisualize
BU of 3frl by Molmil
The 2.25 A crystal structure of LipL32, the major surface antigen of Leptospira interrogans serovar Copenhageni
Descriptor: 2,2',2''-NITRILOTRIETHANOL, CHLORIDE ION, LipL32, ...
Authors:Farah, C.S, Guzzo, C.R, Hauk, P, Ho, P.L.
Deposit date:2009-01-08
Release date:2009-06-16
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure and calcium-binding activity of LipL32, the major surface antigen of pathogenic Leptospira sp.
J.Mol.Biol., 390, 2009
2G3W
DownloadVisualize
BU of 2g3w by Molmil
The Crystal Structure of YaeQ Protein from Xanthomonas axonopodis pv. citri
Descriptor: ACETATE ION, hypothetical protein XAC2396
Authors:Farah, C.S, Guzzo, C.R, Barbosa, J.A.R.G, Nagem, R.A.P.
Deposit date:2006-02-21
Release date:2007-02-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Xanthomonas axonopodis pv. citri YaeQ reveals a new compact protein fold built around a variation of the PD-(D/E)XK nuclease motif
Proteins, 69, 2007
4FOK
DownloadVisualize
BU of 4fok by Molmil
1.8 A Crystal structure of the FimX EAL domain in complex with c-diGMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), FimX, GLYCEROL
Authors:Farah, C.S, Guzzo, C.R.
Deposit date:2012-06-20
Release date:2013-03-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the PilZ-FimXEAL-c-di-GMP Complex Responsible for the Regulation of Bacterial Type IV Pilus Biogenesis.
J.Mol.Biol., 425, 2013
4FOU
DownloadVisualize
BU of 4fou by Molmil
Structure of the PilZ-FimX(EAL domain)-c-di-GMP complex responsible for the regulation of bacterial Type IV pilus biogenesis
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, FimX, ...
Authors:Farah, C.S, Guzzo, C.R.
Deposit date:2012-06-21
Release date:2013-03-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the PilZ-FimXEAL-c-di-GMP Complex Responsible for the Regulation of Bacterial Type IV Pilus Biogenesis.
J.Mol.Biol., 425, 2013
4FOJ
DownloadVisualize
BU of 4foj by Molmil
1.55 A Crystal Structure of Xanthomonas citri FimX EAL domain in complex with c-diGMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), FimX
Authors:Farah, C.S, Guzzo, C.R.
Deposit date:2012-06-20
Release date:2013-03-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of the PilZ-FimXEAL-c-di-GMP Complex Responsible for the Regulation of Bacterial Type IV Pilus Biogenesis.
J.Mol.Biol., 425, 2013
4QTQ
DownloadVisualize
BU of 4qtq by Molmil
Structure of a Xanthomonas Type IV Secretion System related protein
Descriptor: CALCIUM ION, XAC2610 protein
Authors:Souza, D.P, Guzzo, C.R, Farah, C.S.
Deposit date:2014-07-08
Release date:2015-06-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bacterial killing via a type IV secretion system.
Nat Commun, 6, 2015
6GYB
DownloadVisualize
BU of 6gyb by Molmil
Cryo-EM structure of the bacteria-killing type IV secretion system core complex from Xanthomonas citri
Descriptor: VirB10 protein, VirB7, VirB9 protein
Authors:Sgro, G.G, Costa, T.R.D, Farah, C.S, Waksman, G.
Deposit date:2018-06-28
Release date:2018-10-24
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Cryo-EM structure of the bacteria-killing type IV secretion system core complex from Xanthomonas citri.
Nat Microbiol, 3, 2018
6PDK
DownloadVisualize
BU of 6pdk by Molmil
The Structure of Smlt3025, an immunity protein of the Stenotrophomonas maltophilia type IV secretion system
Descriptor: BROMIDE ION, CHLORIDE ION, Uncharacterized protein
Authors:Matsuyama, B.Y, Farah, C.S.
Deposit date:2019-06-19
Release date:2019-09-04
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The opportunistic pathogen Stenotrophomonas maltophilia utilizes a type IV secretion system for interbacterial killing.
Plos Pathog., 15, 2019
3OV5
DownloadVisualize
BU of 3ov5 by Molmil
Atomic structure of the Xanthomonas citri VirB7 globular domain.
Descriptor: ISOPROPYL ALCOHOL, Uncharacterized protein
Authors:Souza, D.P, Farah, C.S.
Deposit date:2010-09-15
Release date:2011-06-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:A Component of the Xanthomonadaceae Type IV Secretion System Combines a VirB7 Motif with a N0 Domain Found in Outer Membrane Transport Proteins.
Plos Pathog., 7, 2011
3QT4
DownloadVisualize
BU of 3qt4 by Molmil
Structure of digestive procathepsin L 3 of Tenebrio molitor larval midgut
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Cathepsin-L-like midgut cysteine proteinase, PHOSPHATE ION, ...
Authors:Beton, D, Guzzo, C.R, Terra, W.R, Farah, C.S.
Deposit date:2011-02-22
Release date:2012-02-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:The 3D structure and function of digestive cathepsin L-like proteinases of Tenebrio molitor larval midgut.
Insect Biochem.Mol.Biol., 42, 2012
3QJ3
DownloadVisualize
BU of 3qj3 by Molmil
Structure of digestive procathepsin L2 proteinase from Tenebrio molitor larval midgut
Descriptor: ACETATE ION, Cathepsin L-like protein
Authors:Beton, D, Guzzo, C.R, Terra, W.R, Farah, C.S.
Deposit date:2011-01-28
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The 3D structure and function of digestive cathepsin L-like proteinases of Tenebrio molitor larval midgut.
Insect Biochem.Mol.Biol., 42, 2012
3CNR
DownloadVisualize
BU of 3cnr by Molmil
Crystal Structure of PilZ (XAC1133) from Xanthomonas axonopodis pv citri
Descriptor: Type IV fimbriae assembly protein
Authors:Guzzo, C.R, Farah, C.S.
Deposit date:2008-03-26
Release date:2009-03-31
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:PILZ protein structure and interactions with PILB and the FIMX EAL domain: implications for control of type IV pilus biogenesis.
J.Mol.Biol., 393, 2009
2F1E
DownloadVisualize
BU of 2f1e by Molmil
Solution structure of ApaG protein
Descriptor: Protein apaG
Authors:Contessa, G, Pertinhez, T.A, Spisni, A, Paci, M, Farah, C.S, Cicero, D.O.
Deposit date:2005-11-14
Release date:2006-10-24
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of ApaG from Xanthomonas axonopodis pv. citri reveals a fibronectin-3 fold.
Proteins, 67, 2007
2JVL
DownloadVisualize
BU of 2jvl by Molmil
NMR structure of the C-terminal domain of MBF1 of Trichoderma reesei
Descriptor: TrMBF1
Authors:Kopke Salinas, R, Tomaselli, S, Camilo, C.M, Valencia, E.Y, Farah, C.S, El-Dorry, H, Chambergo, F.S.
Deposit date:2007-09-20
Release date:2008-09-02
Last modified:2018-01-31
Method:SOLUTION NMR
Cite:Solution structure of the C-terminal domain of multiprotein bridging factor 1 (MBF1) of Trichoderma reesei.
Proteins, 75, 2009
2K6L
DownloadVisualize
BU of 2k6l by Molmil
The solution structure of XACb0070 from Xanthonomas axonopodis pv citri reveals this new protein is a member of the RHH family of transcriptional repressors
Descriptor: Putative uncharacterized protein
Authors:Gallo, M, Cicero, D.O, Amata, I, Eliseo, T, Paci, M, Spisni, A, Ferrari, E, Pertinhez, T.A, Farah, C.S.
Deposit date:2008-07-11
Release date:2009-06-16
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:The solution structure reveals that XACb0070 from the plant pathogen Xanthomonas citri belongs to the RHH superfamily of bacterial DNA-binding proteins
To be Published
2L4W
DownloadVisualize
BU of 2l4w by Molmil
NMR structure of the Xanthomonas VirB7
Descriptor: Uncharacterized protein
Authors:Souza, D.P, Farah, C.S, Salinas, R.K.
Deposit date:2010-10-15
Release date:2011-06-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A Component of the Xanthomonadaceae Type IV Secretion System Combines a VirB7 Motif with a N0 Domain Found in Outer Membrane Transport Proteins.
Plos Pathog., 7, 2011
5UB6
DownloadVisualize
BU of 5ub6 by Molmil
XAC2383 from Xanthomonas citri bound to pyrophosphate
Descriptor: PYROPHOSPHATE 2-, Phosphate-binding protein
Authors:Teixeira, R.D, Guzzo, C.R, Farah, C.S.
Deposit date:2016-12-20
Release date:2018-01-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A bipartite periplasmic receptor-diguanylate cyclase pair (XAC2383-XAC2382) in the bacteriumXanthomonas citri.
J. Biol. Chem., 293, 2018
5UB3
DownloadVisualize
BU of 5ub3 by Molmil
XAC2383 from Xanthomonas citri bound to chloride ion
Descriptor: CHLORIDE ION, Phosphate-binding protein
Authors:Teixeira, R.D, Guzzo, C.R, Farah, C.S.
Deposit date:2016-12-20
Release date:2018-01-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A bipartite periplasmic receptor-diguanylate cyclase pair (XAC2383-XAC2382) in the bacteriumXanthomonas citri.
J. Biol. Chem., 293, 2018
5UB7
DownloadVisualize
BU of 5ub7 by Molmil
XAC2383 from Xanthomonas citri bound to ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Phosphate-binding protein
Authors:Teixeira, R.D, Guzzo, C.R, Farah, C.S.
Deposit date:2016-12-20
Release date:2018-01-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:A bipartite periplasmic receptor-diguanylate cyclase pair (XAC2383-XAC2382) in the bacteriumXanthomonas citri.
J. Biol. Chem., 293, 2018
5UB4
DownloadVisualize
BU of 5ub4 by Molmil
XAC2383 from Xanthomonas citri bound to phosphate
Descriptor: CHLORIDE ION, PHOSPHATE ION, Phosphate-binding protein
Authors:Teixeira, R.D, Guzzo, C.R, Farah, C.S.
Deposit date:2016-12-20
Release date:2018-01-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:A bipartite periplasmic receptor-diguanylate cyclase pair (XAC2383-XAC2382) in the bacteriumXanthomonas citri.
J. Biol. Chem., 293, 2018
5W10
DownloadVisualize
BU of 5w10 by Molmil
Lcd1 GAF domain in complex with cAMP ligand
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, cGMP-specific phosphodiesterase
Authors:Guzzo, C.R, Maciel, N.K, Barbosa, A.S, Farah, C.S.
Deposit date:2017-06-01
Release date:2017-06-28
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and Enzymatic Characterization of a cAMP-Dependent Diguanylate Cyclase from Pathogenic Leptospira Species.
J. Mol. Biol., 429, 2017
6EB3
DownloadVisualize
BU of 6eb3 by Molmil
Structural and enzymatic characterization of an esterase from a metagenomic library
Descriptor: 1,2-ETHANEDIOL, 1,3-dihydroxypropan-2-yl butanoate, 2-hydroxypropane-1,3-diyl dibutanoate, ...
Authors:Guzzo, C.R, Carvalho, C.F, Teixeira, R.D, Farah, C.S.
Deposit date:2018-08-03
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Functional and Structural characterisation of an Esterase from Amazonian Dark Soil
To Be Published
7LKQ
DownloadVisualize
BU of 7lkq by Molmil
The PilZ(delta107-117)-FimX(GGDEF-EAL) complex from Xanthomonas citri
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), FimX(GGDEF-EAL), MAGNESIUM ION, ...
Authors:Llontop, E.E, Guzzo, C.R, Farah, C.S.
Deposit date:2021-02-02
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021
7LKO
DownloadVisualize
BU of 7lko by Molmil
The PilB(N-terminal)-PilZ complex of the Type IV pilus from Xanthomonas citri (2.9 A)
Descriptor: Pilus biogenesis protein, SULFATE ION, Type IV fimbriae assembly protein
Authors:Llontop, E.E, Guzzo, C.R, Farah, C.S.
Deposit date:2021-02-02
Release date:2021-08-11
Last modified:2021-09-01
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021
7LKN
DownloadVisualize
BU of 7lkn by Molmil
The PilB(N-terminal_P70S mutant)-PilZ complex (SeMet)
Descriptor: Pilus biogenesis protein, SULFATE ION, Type IV fimbriae assembly protein
Authors:Llontop, E.E, Guzzo, C.R, Farah, C.S.
Deposit date:2021-02-02
Release date:2021-08-11
Last modified:2021-09-01
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021

 

12>

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon