Author results

3NZ3
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CRYSTAL STRUCTURE OF THE MUCIN-BINDING DOMAIN OF SPR1345 FROM STREPTOCOCCUS PNEUMONIAE
Descriptor:Putative uncharacterized protein, TRIETHYLENE GLYCOL, SULFATE ION
Authors:Du, Y., He, Y.-X., Zhang, Z.-Y., Yang, Y.-H., Shi, W.-W., Frolet, C., Guilmi, A.M., Vernet, T., Zhou, C.-Z., Chen, Y.
Deposit date:2010-07-15
Release date:2011-04-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the mucin-binding domain of Spr1345 from Streptococcus pneumoniae
J.Struct.Biol., 174, 2011
3PPN
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STRUCTURES OF THE SUBSTRATE-BINDING PROTEIN PROVIDE INSIGHTS INTO THE MULTIPLE COMPATIBLE SOLUTES BINDING SPECIFICITIES OF BACILLUS SUBTILIS ABC TRANSPORTER OPUC
Descriptor:Glycine betaine/carnitine/choline-binding protein
Authors:Du, Y., Shi, W.W., He, Y.X., Yang, Y.H., Zhou, C.Z., Chen, Y.
Deposit date:2010-11-24
Release date:2011-05-11
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the substrate-binding protein provide insights into the multiple compatible solute binding specificities of the Bacillus subtilis ABC transporter OpuC
Biochem.J., 436, 2011
3PPO
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STRUCTURES OF THE SUBSTRATE-BINDING PROTEIN PROVIDE INSIGHTS INTO THE MULTIPLE COMPATIBLE SOLUTES BINDING SPECIFICITIES OF BACILLUS SUBTILIS ABC TRANSPORTER OPUC
Descriptor:Glycine betaine/carnitine/choline-binding protein, (2S)-3-carboxy-2-hydroxy-N,N,N-trimethylpropan-1-aminium
Authors:Du, Y., Shi, W.W., He, Y.X., Yang, Y.H., Zhou, C.Z., Chen, Y.
Deposit date:2010-11-24
Release date:2011-05-11
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of the substrate-binding protein provide insights into the multiple compatible solute binding specificities of the Bacillus subtilis ABC transporter OpuC
Biochem.J., 436, 2011
3PPP
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STRUCTURES OF THE SUBSTRATE-BINDING PROTEIN PROVIDE INSIGHTS INTO THE MULTIPLE COMPATIBLE SOLUTES BINDING SPECIFICITIES OF BACILLUS SUBTILIS ABC TRANSPORTER OPUC
Descriptor:Glycine betaine/carnitine/choline-binding protein, TRIMETHYL GLYCINE
Authors:Du, Y., Shi, W.W., He, Y.X., Yang, Y.H., Zhou, C.Z., Chen, Y.
Deposit date:2010-11-25
Release date:2011-05-11
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of the substrate-binding protein provide insights into the multiple compatible solute binding specificities of the Bacillus subtilis ABC transporter OpuC
Biochem.J., 436, 2011
3PPQ
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STRUCTURES OF THE SUBSTRATE-BINDING PROTEIN PROVIDE INSIGHTS INTO THE MULTIPLE COMPATIBLE SOLUTES BINDING SPECIFICITIES OF BACILLUS SUBTILIS ABC TRANSPORTER OPUC
Descriptor:Glycine betaine/carnitine/choline-binding protein, CHOLINE ION
Authors:Du, Y., Shi, W.W., He, Y.X., Yang, Y.H., Zhou, C.Z., Chen, Y.
Deposit date:2010-11-25
Release date:2011-05-11
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structures of the substrate-binding protein provide insights into the multiple compatible solute binding specificities of the Bacillus subtilis ABC transporter OpuC
Biochem.J., 436, 2011
3PPR
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STRUCTURES OF THE SUBSTRATE-BINDING PROTEIN PROVIDE INSIGHTS INTO THE MULTIPLE COMPATIBLE SOLUTES BINDING SPECIFICITIES OF BACILLUS SUBTILIS ABC TRANSPORTER OPUC
Descriptor:Glycine betaine/carnitine/choline-binding protein, (4S)-2-METHYL-1,4,5,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC ACID
Authors:Du, Y., Shi, W.W., He, Y.X., Yang, Y.H., Zhou, C.Z., Chen, Y.
Deposit date:2010-11-25
Release date:2011-05-11
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of the substrate-binding protein provide insights into the multiple compatible solute binding specificities of the Bacillus subtilis ABC transporter OpuC
Biochem.J., 436, 2011
3LZZ
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CRYSTAL STRUCTURES OF CUPIN SUPERFAMILY BBDUF985 FROM BRANCHIOSTOMA BELCHERI TSINGTAUENSE IN APO AND GDP-BOUND FORMS
Descriptor:Putative uncharacterized protein, GUANOSINE-5'-DIPHOSPHATE, ACETATE ION
Authors:Du, Y., He, Y.-X., Saren, G., Zhang, X., Zhang, S.-C., Chen, Y., Zhou, C.-Z.
Deposit date:2010-03-02
Release date:2010-06-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of the apo and GDP-bound forms of a cupin-like protein BbDUF985 from Branchiostoma belcheri tsingtauense
Proteins, 2010
5YZ4
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STRUCTURE OF THE PIN DOMAIN ENDONUCLEASE UTP24
Descriptor:rRNA-processing protein fcf1, CALCIUM ION, ZINC ION
Authors:Du, Y., An, W., Ye, K.
Deposit date:2017-12-12
Release date:2018-12-19
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (2.135 Å)
Cite:Structural role of the Utp24 endonuclease in ribosome assembly
To Be Published
3LOI
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CRYSTAL STRUCTURES OF CUPIN SUPERFAMILY BBDUF985 FROM BRANCHIOSTOMA BELCHERI TSINGTAUENSE IN THE APO AND GDP-BOUND FORMS
Descriptor:Putative uncharacterized protein
Authors:Zou, C.Z., Du, Y., He, Y.-X., Saren, G., Zhang, X., Chen, Y., Zhang, S.-C.
Deposit date:2010-02-04
Release date:2010-06-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the apo and GDP-bound forms of a cupin-like protein BbDUF985 from Branchiostoma belcheri tsingtauense
Proteins, 2010
3FKY
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CRYSTAL STRUCTURE OF THE GLUTAMINE SYNTHETASE GLN1DELTAN18 FROM THE YEAST SACCHAROMYCES CEREVISIAE
Descriptor:Glutamine synthetase, CITRATE ANION
Authors:He, Y.X., Gui, L., Liu, Y.Z., Du, Y., Zhou, Y.Y., Li, P., Zhou, C.Z.
Deposit date:2008-12-18
Release date:2009-10-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of Saccharomyces cerevisiae glutamine synthetase Gln1 suggests a nanotube-like supramolecular assembly
Proteins, 76, 2009
4NND
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STRUCTURAL BASIS OF PTPN18 FINGERPRINT ON DISTINCT HER2 TYROSINE PHOSPHORYLATION SITES
Descriptor:Tyrosine-protein phosphatase non-receptor type 18, Receptor tyrosine-protein kinase erbB-2
Authors:Wang, H., Yang, F., Yang, D., Du, Y.
Deposit date:2013-11-17
Release date:2014-11-19
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Structural basis of PTPN18 fingerprint on distinct HER2 tyrosine phosphorylation sites
To be Published
4XAA
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CRYSTAL STRUCTURE OF AVIO1 FROM STREPTOMYCES VIRIDOCHROMOGENES TUE57
Descriptor:Putative oxygenase, NICKEL (II) ION
Authors:McCulloch, K.M., McCranie, E.K., Sarwar, M., Mathieu, J.L., Gitschlag, B.L., Du, Y., Bachmann, B.O., Iverson, T.M.
Deposit date:2014-12-13
Release date:2015-08-05
Last modified:2015-09-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XAB
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CRYSTAL STRUCTURE OF EVDO2 FROM MICROMONOSPORA CARBONACEA VAR. AURANTIACA
Descriptor:EvdO2, NICKEL (II) ION, IMIDAZOLE
Authors:McCulloch, K.M., McCranie, E.K., Sarwar, M., Mathieu, J.L., Gitschlag, B.L., Du, Y., Bachmann, B.O., Iverson, T.M.
Deposit date:2014-12-13
Release date:2015-08-05
Last modified:2015-09-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XAC
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CRYSTAL STRUCTURE OF EVDO2 FROM MICROMONOSPORA CARBONACEA VAR. AURANTIACA COMPLEXED WITH 2-OXOGLUTARATE
Descriptor:EvdO2, NICKEL (II) ION, IMIDAZOLE, ...
Authors:McCulloch, K.M., McCranie, E.K., Sarwar, M., Mathieu, J.L., Gitschlag, B.L., Du, Y., Bachmann, B.O., Iverson, T.M.
Deposit date:2014-12-13
Release date:2015-08-05
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XBZ
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CRYSTAL STRUCTURE OF EVDO1 FROM MICROMONOSPORA CARBONACEA VAR. AURANTIACA
Descriptor:EvdO1, NICKEL (II) ION, GLYCEROL
Authors:McCulloch, K.M., McCranie, E.K., Sarwar, M., Mathieu, J.L., Gitschlag, B.L., Du, Y., Bachmann, B.O., Iverson, T.M.
Deposit date:2014-12-17
Release date:2015-08-05
Last modified:2015-09-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XC9
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CRYSTAL STRUCTURE OF APO HYGX FROM STREPTOMYCES HYGROSCOPICUS
Descriptor:oxidase/hydroxylase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
Authors:McCulloch, K.M., McCranie, E.K., Sarwar, M., Mathieu, J.L., Gitschlag, B.L., Du, Y., Bachmann, B.O., Iverson, T.M.
Deposit date:2014-12-17
Release date:2015-08-05
Last modified:2015-09-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XCA
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CRYSTAL STRUCTURE OF HYGX FROM STREPTOMYCES HYGROSCOPICUS WITH NICKEL AND 2-OXOGLUTARATE BOUND
Descriptor:oxidase/hydroxylase, NICKEL (II) ION, 2-OXOGLUTARIC ACID, ...
Authors:McCulloch, K.M., McCranie, E.K., Sarwar, M., Mathieu, J.L., Gitschlag, B.L., Du, Y., Bachmann, B.O., Iverson, T.M.
Deposit date:2014-12-17
Release date:2015-08-05
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (2.295 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XCB
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CRYSTAL STRUCTURE OF HYGX FROM STREPTOMYCES HYGROSCOPICUS WITH NICKEL, 2-OXOGLUTARATE, AND HYGROMYCIN B BOUND
Descriptor:oxidase/hydroxylase, NICKEL (II) ION, 2-OXOGLUTARIC ACID, ...
Authors:McCulloch, K.M., McCranie, E.K., Sarwar, M., Mathieu, J.L., Gitschlag, B.L., Du, Y., Bachmann, B.O., Iverson, T.M.
Deposit date:2014-12-17
Release date:2015-08-05
Last modified:2015-09-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZPI
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CRYSTAL STRUCTURE OF HYGX FROM STREPTOMYCES HYGROSCOPICUS WITH IRON BOUND
Descriptor:Putative oxidase/hydroxylase, FE (II) ION, SUCCINIC ACID
Authors:McCulloch, K.M., McCranie, E.K., Sarwar, M., Mathieu, J.L., Gitschlag, B.L., Du, Y., Bachmann, B.O., Iverson, T.M.
Deposit date:2015-05-07
Release date:2015-08-05
Last modified:2015-09-23
Method:X-RAY DIFFRACTION (2.504 Å)
Cite:Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily.
Proc.Natl.Acad.Sci.USA, 112, 2015
5YZV
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BIOPHYSICAL AND STRUCTURAL CHARACTERIZATION OF THE THERMOSTABLE WD40 DOMAIN OF A PROKARYOTIC PROTEIN, THERMOMONOSPORA CURVATA PKWA
Descriptor:Probable serine/threonine-protein kinase PkwA
Authors:Li, D.Y., Shen, C., Du, Y., Qiao, F.F., Kong, T., Yuan, L.R., Zhang, D.L., Wu, X.H., Wu, Y.D.
Deposit date:2017-12-15
Release date:2018-10-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Biophysical and structural characterization of the thermostable WD40 domain of a prokaryotic protein, Thermomonospora curvata PkwA
Sci Rep, 8, 2018
4R5Y
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THE COMPLEX STRUCTURE OF BRAF V600E KINASE DOMAIN WITH A NOVEL BRAF INHIBITOR
Descriptor:Serine/threonine-protein kinase B-raf, 5-({(1R,1aS,6bR)-1-[5-(trifluoromethyl)-1H-benzimidazol-2-yl]-1a,6b-dihydro-1H-cyclopropa[b][1]benzofuran-5-yl}oxy)-3,4-dihydro-1,8-naphthyridin-2(1H)-one
Authors:Feng, Y., Peng, H., Zhang, Y., Liu, Y., Wei, M.
Deposit date:2014-08-22
Release date:2016-02-24
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:BGB-283, a Novel RAF Kinase and EGFR Inhibitor, Displays Potent Antitumor Activity in BRAF-Mutated Colorectal Cancers.
Mol.Cancer Ther., 14, 2015
3RDH
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X-RAY INDUCED COVALENT INHIBITION OF 14-3-3
Descriptor:14-3-3 protein zeta/delta, 4-[(E)-{4-formyl-5-hydroxy-6-methyl-3-[(phosphonooxy)methyl]pyridin-2-yl}diazenyl]benzoic acid, NICKEL (II) ION
Authors:Horton, J.R., Upadhyay, A.K., Fu, H., Cheng, X.
Deposit date:2011-04-01
Release date:2011-09-28
Last modified:2011-10-12
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Discovery and structural characterization of a small molecule 14-3-3 protein-protein interaction inhibitor.
Proc.Natl.Acad.Sci.USA, 108, 2011
5TC1
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IN SITU STRUCTURES OF THE GENOME AND GENOME-DELIVERY APPARATUS IN SSRNA BACTERIOPHAGE MS2
Descriptor:Capsid protein, Maturation protein, phage MS2 genome
Authors:Dai, X.H., Li, Z.H., Lai, M., Shu, S., Du, Y.S., Zhou, Z.H., Sun, R.
Deposit date:2016-09-13
Release date:2016-12-07
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:In situ structures of the genome and genome-delivery apparatus in a single-stranded RNA virus.
Nature, 541, 2017
1SJ6
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NMR STRUCTURE AND REGULATED EXPRESSION IN APL CELL OF HUMAN SH3BGRL3
Descriptor:SH3 domain-binding glutamic acid-rich-like protein 3
Authors:Xu, C., Tang, Y., Xu, Y., Wu, J., Shi, Y., Zhang, Q., Zheng, P., Du, Y.
Deposit date:2004-03-03
Release date:2005-03-22
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR structure and regulated expression in APL cell of human SH3BGRL3.
Febs Lett., 579, 2005
3FVM
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CRYSTAL STRUCTURE OF STEPTOCOCCUS SUIS MANNONATE DEHYDRATASE WITH METAL MN++
Descriptor:Mannonate dehydratase, MANGANESE (II) ION
Authors:Peng, H., Zhang, Q.J., Gao, F., Liu, Y., Gao, F.G.
Deposit date:2009-01-16
Release date:2009-09-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of Streptococcus suis mannonate dehydratase (ManD) and its complex with substrate: genetic and biochemical evidence for a catalytic mechanism
J.Bacteriol., 191, 2009
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