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2O8K
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BU of 2o8k by Molmil
NMR Structure of the Sigma-54 RpoN Domain Bound to the-24 Promoter Element
Descriptor: 5'-D(*GP*AP*AP*AP*CP*GP*TP*GP*CP*CP*AP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*GP*CP*AP*CP*GP*TP*TP*TP*C)-3', RNA polymerase sigma factor RpoN
Authors:Doucleff, M, Pelton, J.G, Lee, P.S, Wemmer, D.E.
Deposit date:2006-12-12
Release date:2007-07-17
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structural basis of DNA recognition by the alternative sigma-factor, sigma54.
J.Mol.Biol., 369, 2007
2O9L
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BU of 2o9l by Molmil
AMBER refined NMR Structure of the Sigma-54 RpoN Domain Bound to the-24 Promoter Element
Descriptor: 5'-D(*GP*AP*AP*AP*CP*GP*TP*GP*CP*CP*AP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*GP*CP*AP*CP*GP*TP*TP*TP*C)-3', RNA polymerase sigma factor RpoN
Authors:Doucleff, M, Pelton, J.G, Lee, P.S, Wemmer, D.E.
Deposit date:2006-12-13
Release date:2007-07-17
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structural basis of DNA recognition by the alternative sigma-factor, sigma54.
J.Mol.Biol., 369, 2007
1ZY2
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BU of 1zy2 by Molmil
Crystal structure of the phosphorylated receiver domain of the transcription regulator NtrC1 from Aquifex aeolicus
Descriptor: MAGNESIUM ION, transcriptional regulator NtrC1
Authors:Doucleff, M, Chen, B, Maris, A.E, Wemmer, D.E, Kondrashkina, E, Nixon, B.T.
Deposit date:2005-06-09
Release date:2005-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Negative regulation of AAA + ATPase assembly by two component receiver domains: a transcription activation mechanism that is conserved in mesophilic and extremely hyperthermophilic bacteria
J.Mol.Biol., 353, 2005
2AHQ
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BU of 2ahq by Molmil
Solution Structure of the C-terminal RpoN Domain of Sigma-54 from Aquifex aeolicus
Descriptor: RNA polymerase sigma factor RpoN
Authors:Doucleff, M, Malak, L.T, Pelton, J.G, Wemmer, D.E.
Deposit date:2005-07-28
Release date:2005-10-11
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The C-terminal RpoN domain of sigma54 forms an unpredicted helix-turn-helix motif similar to domains of sigma70.
J.Biol.Chem., 280, 2005
3DZD
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BU of 3dzd by Molmil
Crystal structure of sigma54 activator NTRC4 in the inactive state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, SODIUM ION, Transcriptional regulator (NtrC family)
Authors:Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E.
Deposit date:2008-07-29
Release date:2008-11-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation.
J.Mol.Biol., 384, 2008
3E7L
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BU of 3e7l by Molmil
Crystal structure of sigma54 activator NtrC4's DNA binding domain
Descriptor: Transcriptional regulator (NtrC family), ZINC ION
Authors:Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E.
Deposit date:2008-08-18
Release date:2008-11-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.252 Å)
Cite:Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation.
J.Mol.Biol., 384, 2008
4G3K
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BU of 4g3k by Molmil
Crystal structure of a. aeolicus nlh1 gaf domain in an inactive state
Descriptor: Transcriptional regulator nlh1
Authors:Wemmer, D.E, Batchelor, J.D, Wang, A, Lee, P, Doucleff, M.
Deposit date:2012-07-14
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural mechanism of GAF-regulated delta(54) activators from Aquifex aeolicus
J.Mol.Biol., 425, 2013
4G3W
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BU of 4g3w by Molmil
Crystal structure of a. aeolicus nlh1 gaf domain in an inactive state
Descriptor: Transcriptional regulator nlh1
Authors:Batchelor, J.D, Wang, A, Lee, P, Doucleff, M, Wemmer, D.E.
Deposit date:2012-07-15
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural mechanism of GAF-regulated delta(54) activators from Aquifex aeolicus
J.Mol.Biol., 425, 2013
4G3V
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BU of 4g3v by Molmil
Crystal structure of A. Aeolicus nlh2 gaf domain in an inactive state
Descriptor: CHLORIDE ION, Transcriptional regulator nlh2
Authors:Batchelor, J.D, Lee, P, Wang, A, Doucleff, M, Wemmer, D.E.
Deposit date:2012-07-15
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural mechanism of GAF-regulated delta(54) activators from Aquifex aeolicus
J.Mol.Biol., 425, 2013
2JRL
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BU of 2jrl by Molmil
Solution structure of the beryllofluoride-activated NtrC4 receiver domain dimer
Descriptor: Transcriptional regulator (NtrC family)
Authors:Lee, C, Hong, E, Doucleff, M, Pelton, J.G, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC)
Deposit date:2007-06-27
Release date:2008-07-01
Last modified:2020-02-19
Method:SOLUTION NMR
Cite:Solution Structure of the Beryllofluoride-Activated NtrC4 Receiver Domain Dimer.
To be Published
1ZDM
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BU of 1zdm by Molmil
Crystal Structure of Activated CheY Bound to Xe
Descriptor: Chemotaxis protein cheY, MANGANESE (II) ION, XENON
Authors:Lowery, T.J, Doucleff, M, Ruiz, E.J, Rubin, S.M, Pines, A, Wemmer, D.E.
Deposit date:2005-04-14
Release date:2005-04-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Distinguishing multiple chemotaxis Y protein conformations with laser-polarized 129Xe NMR.
Protein Sci., 14, 2005
2K9L
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BU of 2k9l by Molmil
Structure of the Core Binding Domain of sigma54
Descriptor: RNA polymerase sigma factor RpoN
Authors:Hong, E, Wemmer, D.
Deposit date:2008-10-19
Release date:2009-05-26
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure of the RNA polymerase core-binding domain of sigma(54) reveals a likely conformational fracture point
J.Mol.Biol., 390, 2009
2K9M
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BU of 2k9m by Molmil
Structure of the Core Binding Domain of sigma54
Descriptor: RNA polymerase sigma factor RpoN
Authors:Hong, E, Wemmer, D.
Deposit date:2008-10-19
Release date:2009-05-26
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure of the RNA polymerase core-binding domain of sigma(54) reveals a likely conformational fracture point
J.Mol.Biol., 390, 2009

217705

PDB entries from 2024-03-27

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