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6RNT
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BU of 6rnt by Molmil
CRYSTAL STRUCTURE OF RIBONUCLEASE T1 COMPLEXED WITH ADENOSINE 2'-MONOPHOSPHATE AT 1.8-ANGSTROMS RESOLUTION
Descriptor: ADENOSINE-2'-MONOPHOSPHATE, CALCIUM ION, RIBONUCLEASE T1
Authors:Ding, J, Koellner, G, Grunert, H.-P, Saenger, W.
Deposit date:1991-08-20
Release date:1993-01-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of ribonuclease T1 complexed with adenosine 2'-monophosphate at 1.8-A resolution.
J.Biol.Chem., 266, 1991
8RNT
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BU of 8rnt by Molmil
STRUCTURE OF RIBONUCLEASE T1 COMPLEXED WITH ZINC(II) AT 1.8 ANGSTROMS RESOLUTION: A ZN2+.6H2O.CARBOXYLATE CLATHRATE
Descriptor: RIBONUCLEASE T1, ZINC ION
Authors:Ding, J, Choe, H.-W, Granzin, J, Saenger, W.
Deposit date:1991-09-23
Release date:1993-01-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of ribonuclease T1 complexed with zinc(II) at 1.8 A resolution: a Zn2+.6H2O.carboxylate clathrate.
Acta Crystallogr.,Sect.B, 48, 1992
1AVP
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BU of 1avp by Molmil
STRUCTURE OF HUMAN ADENOVIRUS 2 PROTEINASE WITH ITS 11 AMINO ACID COFACTOR
Descriptor: ADENOVIRAL PROTEINASE
Authors:Ding, J, Mcgrath, W.J, Sweet, R.M, Mangel, W.F.
Deposit date:1996-04-04
Release date:1997-11-19
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the human adenovirus proteinase with its 11 amino acid cofactor.
EMBO J., 15, 1996
1HNI
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BU of 1hni by Molmil
STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN A COMPLEX WITH THE NONNUCLEOSIDE INHIBITOR ALPHA-APA R 95845 AT 2.8 ANGSTROMS RESOLUTION
Descriptor: (2-ACETYL-5-METHYLANILINO)(2,6-DIBROMOPHENYL)ACETAMIDE, HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51), HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66)
Authors:Ding, J, Das, K, Arnold, E.
Deposit date:1995-02-28
Release date:1995-06-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of HIV-1 reverse transcriptase in a complex with the non-nucleoside inhibitor alpha-APA R 95845 at 2.8 A resolution.
Structure, 3, 1995
2HMI
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BU of 2hmi by Molmil
HIV-1 REVERSE TRANSCRIPTASE/FRAGMENT OF FAB 28/DNA COMPLEX
Descriptor: DNA (5'-D(*AP*TP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*A)-3'), FAB FRAGMENT OF MONOCLONAL ANTIBODY 28, ...
Authors:Ding, J, Arnold, E.
Deposit date:1998-04-10
Release date:1998-10-14
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and functional implications of the polymerase active site region in a complex of HIV-1 RT with a double-stranded DNA template-primer and an antibody Fab fragment at 2.8 A resolution.
J.Mol.Biol., 284, 1998
3A0E
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BU of 3a0e by Molmil
Crystal Structure of Polygonatum cyrtonema lectin (PCL) complexed with dimannoside
Descriptor: Mannose/sialic acid-binding lectin, SULFATE ION, alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose
Authors:Ding, J, Wang, D.C.
Deposit date:2009-03-16
Release date:2010-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of a novel anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua with unique ligand-binding property and super-structure
J.Struct.Biol., 171, 2010
3A0C
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BU of 3a0c by Molmil
Crystal Structure of an anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua
Descriptor: Mannose/sialic acid-binding lectin
Authors:Ding, J, Wang, D.C.
Deposit date:2009-03-16
Release date:2010-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of a novel anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua with unique ligand-binding property and super-structure
J.Struct.Biol., 171, 2010
3A0D
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BU of 3a0d by Molmil
Crystal Structure of Polygonatum cyrtonema lectin (PCL) complexed with monomannoside
Descriptor: Mannose/sialic acid-binding lectin, SULFATE ION, methyl alpha-D-mannopyranoside
Authors:Ding, J, Wang, D.C.
Deposit date:2009-03-16
Release date:2010-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of a novel anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua with unique ligand-binding property and super-structure
J.Struct.Biol., 171, 2010
1K5M
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BU of 1k5m by Molmil
Crystal Structure of a Human Rhinovirus Type 14:Human Immunodeficiency Virus Type 1 V3 Loop Chimeric Virus MN-III-2
Descriptor: CHIMERA OF HRV14 COAT PROTEIN VP2 (P1B) AND the V3 loop of HIV-1 gp120, COAT PROTEIN VP1 (P1D), COAT PROTEIN VP3 (P1C), ...
Authors:Ding, J, Smith, A.D, Geisler, S.C, Ma, X, Arnold, G.F, Arnold, E.
Deposit date:2001-10-11
Release date:2002-07-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of a Human Rhinovirus that Displays Part of the HIV-1 V3 Loop and Induces Neutralizing Antibodies against HIV-1
Structure, 10, 2002
3AJM
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BU of 3ajm by Molmil
Crystal structure of programmed cell death 10 in complex with inositol 1,3,4,5-tetrakisphosphate
Descriptor: INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, Programmed cell death protein 10
Authors:Ding, J, Wang, D.C.
Deposit date:2010-06-09
Release date:2010-06-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human programmed cell death 10 complexed with inositol-(1,3,4,5)-tetrakisphosphate: a novel adaptor protein involved in human cerebral cavernous malformation.
Biochem.Biophys.Res.Commun., 399, 2010
8SA4
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BU of 8sa4 by Molmil
Adenosylcobalamin-bound riboswitch dimer, form 3
Descriptor: Adenosylcobalamin, adenosylcobalamin riboswitch form 3
Authors:Ding, J, Deme, J.C, Stagno, J.R, Yu, P, Lea, S.M, Wang, Y.X.
Deposit date:2023-03-31
Release date:2023-07-26
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Capturing heterogeneous conformers of cobalamin riboswitch by cryo-EM.
Nucleic Acids Res., 51, 2023
8SA5
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BU of 8sa5 by Molmil
Adenosylcobalamin-bound riboswitch dimer, form 4
Descriptor: Adenosylcobalamin, adenosylcobalamin riboswitch form 4
Authors:Ding, J, Deme, J.C, Stagno, J.R, Yu, P, Lea, S.M, Wang, Y.X.
Deposit date:2023-03-31
Release date:2023-07-26
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Capturing heterogeneous conformers of cobalamin riboswitch by cryo-EM.
Nucleic Acids Res., 51, 2023
8SA3
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BU of 8sa3 by Molmil
Adenosylcobalamin-bound riboswitch dimer, form 2
Descriptor: Adenosylcobalamin, adenosylcobalamin riboswitch form 2
Authors:Ding, J, Deme, J.C, Stagno, J.R, Yu, P, Lea, S.M, Wang, Y.X.
Deposit date:2023-03-31
Release date:2023-07-26
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Capturing heterogeneous conformers of cobalamin riboswitch by cryo-EM.
Nucleic Acids Res., 51, 2023
8SA6
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BU of 8sa6 by Molmil
apo form of adenosylcobalamin riboswitch dimer
Descriptor: apo form of adenosylcobalamin riboswitch dimer
Authors:Ding, J, Deme, J.C, Stagno, J.R, Yu, P, Lea, S.M, Wang, Y.X.
Deposit date:2023-03-31
Release date:2023-07-26
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:Capturing heterogeneous conformers of cobalamin riboswitch by cryo-EM.
Nucleic Acids Res., 51, 2023
8SA2
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BU of 8sa2 by Molmil
Adenosylcobalamin-bound riboswitch dimer, form 1
Descriptor: Adenosylcobalamin, adenosylcobalamin riboswitch form 1
Authors:Ding, J, Deme, J.C, Stagno, J.R, Yu, P, Lea, S.M, Wang, Y.X.
Deposit date:2023-03-31
Release date:2023-07-26
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Capturing heterogeneous conformers of cobalamin riboswitch by cryo-EM.
Nucleic Acids Res., 51, 2023
3VPI
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BU of 3vpi by Molmil
Crystal structure of type VI effector Tse1 from Pseudomonas aeruginosa
Descriptor: FORMIC ACID, type VI secretion exported 1
Authors:Ding, J, Wang, W, Wang, D.C.
Deposit date:2012-03-04
Release date:2012-06-27
Last modified:2013-08-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into the Pseudomonas aeruginosa type VI virulence effector Tse1 bacteriolysis and self-protection mechanisms
J.Biol.Chem., 287, 2012
3VPJ
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BU of 3vpj by Molmil
crystal structure of type VI effector Tse1 from Pseudomonas aeruginosa in complex with immune protein Tsi1
Descriptor: Tse1-specific immunity protein, type VI secretion exported 1
Authors:Ding, J, Wang, W, Wang, D.C.
Deposit date:2012-03-04
Release date:2012-06-27
Last modified:2013-08-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into the Pseudomonas aeruginosa type VI virulence effector Tse1 bacteriolysis and self-protection mechanisms
J.Biol.Chem., 287, 2012
3WLD
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BU of 3wld by Molmil
Crystal structure of monomeric GCaMP6m
Descriptor: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ...
Authors:Ding, J, Luo, A.F, Hu, L.Y, Wang, D.C, Shao, F.
Deposit date:2013-11-08
Release date:2014-01-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of the ultrasensitive calcium indicator GCaMP6.
Sci China Life Sci, 57, 2014
3WLC
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BU of 3wlc by Molmil
Crystal structure of dimeric GCaMP6m
Descriptor: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ...
Authors:Ding, J, Luo, A.F, Hu, L.Y, Wang, D.C, Shao, F.
Deposit date:2013-11-08
Release date:2014-01-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural basis of the ultrasensitive calcium indicator GCaMP6.
Sci China Life Sci, 57, 2014
5B5R
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BU of 5b5r by Molmil
Crystal structure of GSDMA3
Descriptor: Gasdermin-A3
Authors:Ding, J, Shao, F.
Deposit date:2016-05-14
Release date:2016-06-15
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Pore-forming activity and structural autoinhibition of the gasdermin family.
Nature, 535, 2016
2UP1
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BU of 2up1 by Molmil
STRUCTURE OF UP1-TELOMERIC DNA COMPLEX
Descriptor: DNA (5'-D(P*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), PROTEIN (HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1)
Authors:Ding, J, Hayashi, M.K, Krainer, A.R, Xu, R.-M.
Deposit date:1998-07-10
Release date:1999-11-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the two-RRM domain of hnRNP A1 (UP1) complexed with single-stranded telomeric DNA.
Genes Dev., 13, 1999
2WEB
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BU of 2web by Molmil
ACID PROTEINASE (PENICILLOPEPSIN) (E.C.3.4.23.20) COMPLEX WITH PHOSPHONATE INHIBITOR: METHYL(2S)-[1-(((N-FORMYL)-L-VALYL)AMINO-2-(2-NAPHTHYL)ETHYL)HYDROXYPHOSPHINYLOXY]-3-PHENYLPROPANOATE, SODIUM SALT
Descriptor: METHYL (2S)-[1-((N-FORMYL)-L-VALYL)AMINO-2-(2-NAPHTHYL)ETHYL)HYDROXYPHOSPHINYLOXY]-3-PHENYL PROPANOATE, PENICILLOPEPSIN, SULFATE ION, ...
Authors:Ding, J, Fraser, M.E, James, M.N.G.
Deposit date:1998-02-03
Release date:1998-05-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Macrocyclic Inhibitors of Penicillopepsin. II. X-Ray Crystallographic Analyses of Penicillopepsin Complexed with a P3-P1 Macrocyclic Peptidyl Inhibitor and with its Two Acyclic Analogues
J.Am.Chem.Soc., 120, 1998
2WEC
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BU of 2wec by Molmil
ACID PROTEINASE (PENICILLOPEPSIN) (E.C.3.4.23.20) COMPLEX WITH PHOSPHONATE INHIBITOR: METHYL(2S)-[1-(((N-(1-NAPHTHALENEACETYL))-L-VALYL)AMINOMETHYL)HYDROXY PHOSPHINYLOXY]-3-PHENYLPROPANOATE, SODIUM SALT
Descriptor: METHYL (2S)-[1-((N-(NAPHTHALENEACETYL))-L-VALYL)AMINOMETHYL)HYDROXYPHOSPHINYLOXY]-3-PHENYL PROPANOATE, PENICILLOPEPSIN, SULFATE ION, ...
Authors:Ding, J, Fraser, M.E, James, M.N.G.
Deposit date:1998-02-03
Release date:1998-05-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Macrocyclic Inhibitors of Penicillopepsin. II. X-Ray Crystallographic Analyses of Penicillopepsin Complexed with a P3-P1 Macrocyclic Peptidyl Inhibitor and with its Two Acyclic Analogues
J.Am.Chem.Soc., 120, 1998
2WEA
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BU of 2wea by Molmil
ACID PROTEINASE (PENICILLOPEPSIN) (E.C.3.4.23.20) COMPLEX WITH PHOSPHONATE INHIBITOR: METHYL[CYCLO-7[(2R)-((N-VALYL) AMINO)-2-(HYDROXYL-(1S)-1-METHYOXYCARBONYL-2-PHENYLETHOXY) PHOSPHINYLOXY-ETHYL]-1-NAPHTHALENEACETAMIDE], SODIUM SALT
Descriptor: METHYL[CYCLO-7[(2R)-((N-VALYL)AMINO)-2-(HYDROXYL-(1S)-1-METHYLOXYCARBONYL-2-PHENYLETHOXY)PHOSPHINYLOXY-ETHYL]-1-NAPHTHALENEACETAMIDE], PENICILLOPEPSIN, SULFATE ION, ...
Authors:Ding, J, Fraser, M.E, James, M.N.G.
Deposit date:1998-02-03
Release date:1998-05-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Macrocyclic Inhibitors of Penicillopepsin. II. X-Ray Crystallographic Analyses of Penicillopepsin Complexed with a P3-P1 Macrocyclic Peptidyl Inhibitor and with its Two Acyclic Analogues
J.Am.Chem.Soc., 120, 1998
2WED
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BU of 2wed by Molmil
ACID PROTEINASE (PENICILLOPEPSIN) (E.C.3.4.23.20) COMPLEX WITH PHOSPHONATE MACROCYCLIC INHIBITOR:METHYL[CYCLO-7[(2R)-((N-VALYL)AMINO)-2-(HYDROXYL-(1S)-1-METHYOXYCARBONYL-2-PHENYLETHOXY)PHOSPHINYLOXY-ETHYL]-1-NAPHTHALENEACETAMIDE], SODIUM SALT
Descriptor: METHYL[CYCLO-7[(2R)-((N-VALYL)AMINO)-2-(HYDROXYL-(1S)-1-METHYLOXYCARBONYL-2-PHENYLETHOXY)PHOSPHINYLOXY-ETHYL]-1-NAPHTHALENEACETAMIDE], PENICILLOPEPSIN, SULFATE ION, ...
Authors:Ding, J, Fraser, M.E, James, M.N.G.
Deposit date:1998-02-03
Release date:1998-05-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Macrocyclic Inhibitors of Penicillopepsin. II. X-Ray Crystallographic Analyses of Penicillopepsin Complexed with a P3-P1 Macrocyclic Peptidyl Inhibitor and with its Two Acyclic Analogues
J.Am.Chem.Soc., 120, 1998

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