Author results

1HNI
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STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN A COMPLEX WITH THE NONNUCLEOSIDE INHIBITOR ALPHA-APA R 95845 AT 2.8 ANGSTROMS RESOLUTION
Descriptor:HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66), HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51), (2-ACETYL-5-METHYLANILINO)(2,6-DIBROMOPHENYL)ACETAMIDE
Authors:Ding, J., Das, K., Arnold, E.
Deposit date:1995-02-28
Release date:1995-06-03
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of HIV-1 reverse transcriptase in a complex with the non-nucleoside inhibitor alpha-APA R 95845 at 2.8 A resolution.
Structure, 3, 1995
2HMI
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HIV-1 REVERSE TRANSCRIPTASE/FRAGMENT OF FAB 28/DNA COMPLEX
Descriptor:DNA (5'-D(*AP*TP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*A)-3'), SUBUNIT OF V-1 REVERSE TRANSCRIPTASE, ...
Authors:Ding, J., Arnold, E.
Deposit date:1998-04-10
Release date:1998-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and functional implications of the polymerase active site region in a complex of HIV-1 RT with a double-stranded DNA template-primer and an antibody Fab fragment at 2.8 A resolution.
J.Mol.Biol., 284, 1998
1AVP
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STRUCTURE OF HUMAN ADENOVIRUS 2 PROTEINASE WITH ITS 11 AMINO ACID COFACTOR
Descriptor:ADENOVIRAL PROTEINASE
Authors:Ding, J., Mcgrath, W.J., Sweet, R.M., Mangel, W.F.
Deposit date:1996-04-04
Release date:1997-11-19
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the human adenovirus proteinase with its 11 amino acid cofactor.
EMBO J., 15, 1996
3A0C
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CRYSTAL STRUCTURE OF AN ANTI-HIV MANNOSE-BINDING LECTIN FROM POLYGONATUM CYRTONEMA HUA
Descriptor:Mannose/sialic acid-binding lectin
Authors:Ding, J., Wang, D.C.
Deposit date:2009-03-16
Release date:2010-03-16
Last modified:2012-03-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of a novel anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua with unique ligand-binding property and super-structure
J.Struct.Biol., 171, 2010
3A0D
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CRYSTAL STRUCTURE OF POLYGONATUM CYRTONEMA LECTIN (PCL) COMPLEXED WITH MONOMANNOSIDE
Descriptor:Mannose/sialic acid-binding lectin, O1-METHYL-MANNOSE, SULFATE ION
Authors:Ding, J., Wang, D.C.
Deposit date:2009-03-16
Release date:2010-03-16
Last modified:2012-03-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of a novel anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua with unique ligand-binding property and super-structure
J.Struct.Biol., 171, 2010
3A0E
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CRYSTAL STRUCTURE OF POLYGONATUM CYRTONEMA LECTIN (PCL) COMPLEXED WITH DIMANNOSIDE
Descriptor:Mannose/sialic acid-binding lectin, 3-O-alpha-D-mannopyranosyl-alpha-D-mannopyranose, SULFATE ION
Authors:Ding, J., Wang, D.C.
Deposit date:2009-03-16
Release date:2010-03-16
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of a novel anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua with unique ligand-binding property and super-structure
J.Struct.Biol., 171, 2010
5B5R
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CRYSTAL STRUCTURE OF GSDMA3
Descriptor:Gasdermin-A3
Authors:Ding, J., Shao, F.
Deposit date:2016-05-14
Release date:2016-06-15
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Pore-forming activity and structural autoinhibition of the gasdermin family.
Nature, 535, 2016
8RNT
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STRUCTURE OF RIBONUCLEASE T1 COMPLEXED WITH ZINC(II) AT 1.8 ANGSTROMS RESOLUTION: A ZN2+.6H2O.CARBOXYLATE CLATHRATE
Descriptor:RIBONUCLEASE T1, ZINC ION
Authors:Ding, J., Choe, H.-W., Granzin, J., Saenger, W.
Deposit date:1991-09-23
Release date:1993-01-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of ribonuclease T1 complexed with zinc(II) at 1.8 A resolution: a Zn2+.6H2O.carboxylate clathrate.
Acta Crystallogr.,Sect.B, 48, 1992
1K5M
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CRYSTAL STRUCTURE OF A HUMAN RHINOVIRUS TYPE 14:HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 V3 LOOP CHIMERIC VIRUS MN-III-2
Descriptor:COAT PROTEIN VP1 (P1D), CHIMERA OF HRV14 COAT PROTEIN VP2 (P1B) AND the V3 loop of HIV-1 gp120, COAT PROTEIN VP3 (P1C), ...
Authors:Ding, J., Smith, A.D., Geisler, S.C., Ma, X., Arnold, G.F., Arnold, E.
Deposit date:2001-10-11
Release date:2002-07-17
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of a Human Rhinovirus that Displays Part of the HIV-1 V3 Loop and Induces Neutralizing Antibodies against HIV-1
Structure, 10, 2002
2UP1
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STRUCTURE OF UP1-TELOMERIC DNA COMPLEX
Descriptor:DNA (5'-D(P*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), PROTEIN (HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1)
Authors:Ding, J., Hayashi, M.K., Krainer, A.R., Xu, R.-M.
Deposit date:1998-07-10
Release date:1999-11-10
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the two-RRM domain of hnRNP A1 (UP1) complexed with single-stranded telomeric DNA.
Genes Dev., 13, 1999
2WEA
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ACID PROTEINASE (PENICILLOPEPSIN) (E.C.3.4.23.20) COMPLEX WITH PHOSPHONATE INHIBITOR: METHYL[CYCLO-7[(2R)-((N-VALYL) AMINO)-2-(HYDROXYL-(1S)-1-METHYOXYCARBONYL-2-PHENYLETHOXY) PHOSPHINYLOXY-ETHYL]-1-NAPHTHALENEACETAMIDE], SODIUM SALT
Descriptor:PENICILLOPEPSIN, ALPHA-D-MANNOSE, SULFATE ION, ...
Authors:Ding, J., Fraser, M.E., James, M.N.G.
Deposit date:1998-02-03
Release date:1998-05-27
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Macrocyclic Inhibitors of Penicillopepsin. II. X-Ray Crystallographic Analyses of Penicillopepsin Complexed with a P3-P1 Macrocyclic Peptidyl Inhibitor and with its Two Acyclic Analogues
J.Am.Chem.Soc., 120, 1998
2WEB
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ACID PROTEINASE (PENICILLOPEPSIN) (E.C.3.4.23.20) COMPLEX WITH PHOSPHONATE INHIBITOR: METHYL(2S)-[1-(((N-FORMYL)-L-VALYL)AMINO-2-(2-NAPHTHYL)ETHYL)HYDROXYPHOSPHINYLOXY]-3-PHENYLPROPANOATE, SODIUM SALT
Descriptor:PENICILLOPEPSIN, ALPHA-D-MANNOSE, SULFATE ION, ...
Authors:Ding, J., Fraser, M.E., James, M.N.G.
Deposit date:1998-02-03
Release date:1998-05-27
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Macrocyclic Inhibitors of Penicillopepsin. II. X-Ray Crystallographic Analyses of Penicillopepsin Complexed with a P3-P1 Macrocyclic Peptidyl Inhibitor and with its Two Acyclic Analogues
J.Am.Chem.Soc., 120, 1998
2WEC
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ACID PROTEINASE (PENICILLOPEPSIN) (E.C.3.4.23.20) COMPLEX WITH PHOSPHONATE INHIBITOR: METHYL(2S)-[1-(((N-(1-NAPHTHALENEACETYL))-L-VALYL)AMINOMETHYL)HYDROXY PHOSPHINYLOXY]-3-PHENYLPROPANOATE, SODIUM SALT
Descriptor:PENICILLOPEPSIN, ALPHA-D-MANNOSE, SULFATE ION, ...
Authors:Ding, J., Fraser, M.E., James, M.N.G.
Deposit date:1998-02-03
Release date:1998-05-27
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Macrocyclic Inhibitors of Penicillopepsin. II. X-Ray Crystallographic Analyses of Penicillopepsin Complexed with a P3-P1 Macrocyclic Peptidyl Inhibitor and with its Two Acyclic Analogues
J.Am.Chem.Soc., 120, 1998
2WED
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ACID PROTEINASE (PENICILLOPEPSIN) (E.C.3.4.23.20) COMPLEX WITH PHOSPHONATE MACROCYCLIC INHIBITOR:METHYL[CYCLO-7[(2R)-((N-VALYL)AMINO)-2-(HYDROXYL-(1S)-1-METHYOXYCARBONYL-2-PHENYLETHOXY)PHOSPHINYLOXY-ETHYL]-1-NAPHTHALENEACETAMIDE], SODIUM SALT
Descriptor:PENICILLOPEPSIN, ALPHA-D-MANNOSE, SULFATE ION, ...
Authors:Ding, J., Fraser, M.E., James, M.N.G.
Deposit date:1998-02-03
Release date:1998-05-27
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Macrocyclic Inhibitors of Penicillopepsin. II. X-Ray Crystallographic Analyses of Penicillopepsin Complexed with a P3-P1 Macrocyclic Peptidyl Inhibitor and with its Two Acyclic Analogues
J.Am.Chem.Soc., 120, 1998
3AJM
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CRYSTAL STRUCTURE OF PROGRAMMED CELL DEATH 10 IN COMPLEX WITH INOSITOL 1,3,4,5-TETRAKISPHOSPHATE
Descriptor:Programmed cell death protein 10, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
Authors:Ding, J., Wang, D.C.
Deposit date:2010-06-09
Release date:2010-06-30
Last modified:2012-03-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human programmed cell death 10 complexed with inositol-(1,3,4,5)-tetrakisphosphate: a novel adaptor protein involved in human cerebral cavernous malformation.
Biochem.Biophys.Res.Commun., 399, 2010
3VPI
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CRYSTAL STRUCTURE OF TYPE VI EFFECTOR TSE1 FROM PSEUDOMONAS AERUGINOSA
Descriptor:type VI secretion exported 1, FORMIC ACID
Authors:Ding, J., Wang, W., Wang, D.C.
Deposit date:2012-03-04
Release date:2012-06-27
Last modified:2013-08-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into the Pseudomonas aeruginosa type VI virulence effector Tse1 bacteriolysis and self-protection mechanisms
J.Biol.Chem., 287, 2012
3VPJ
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CRYSTAL STRUCTURE OF TYPE VI EFFECTOR TSE1 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH IMMUNE PROTEIN TSI1
Descriptor:type VI secretion exported 1, Tse1-specific immunity protein
Authors:Ding, J., Wang, W., Wang, D.C.
Deposit date:2012-03-04
Release date:2012-06-27
Last modified:2013-08-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into the Pseudomonas aeruginosa type VI virulence effector Tse1 bacteriolysis and self-protection mechanisms
J.Biol.Chem., 287, 2012
3WLC
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CRYSTAL STRUCTURE OF DIMERIC GCAMP6M
Descriptor:Myosin light chain kinase, Green fluorescent protein, Calmodulin, ...
Authors:Ding, J., Luo, A.F., Hu, L.Y., Wang, D.C., Shao, F.
Deposit date:2013-11-08
Release date:2014-01-22
Last modified:2018-11-21
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural basis of the ultrasensitive calcium indicator GCaMP6.
Sci China Life Sci, 2014
3WLD
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CRYSTAL STRUCTURE OF MONOMERIC GCAMP6M
Descriptor:Myosin light chain kinase, Green fluorescent protein, Calmodulin, ...
Authors:Ding, J., Luo, A.F., Hu, L.Y., Wang, D.C., Shao, F.
Deposit date:2013-11-08
Release date:2014-01-22
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of the ultrasensitive calcium indicator GCaMP6.
Sci China Life Sci, 2014
6RNT
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CRYSTAL STRUCTURE OF RIBONUCLEASE T1 COMPLEXED WITH ADENOSINE 2'-MONOPHOSPHATE AT 1.8-ANGSTROMS RESOLUTION
Descriptor:RIBONUCLEASE T1, CALCIUM ION, ADENOSINE-2'-MONOPHOSPHATE
Authors:Ding, J., Koellner, G., Grunert, H.-P., Saenger, W.
Deposit date:1991-08-20
Release date:1993-01-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of ribonuclease T1 complexed with adenosine 2'-monophosphate at 1.8-A resolution.
J.Biol.Chem., 266, 1991
1HNV
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STRUCTURE OF HIV-1 RT(SLASH)TIBO R 86183 COMPLEX REVEALS SIMILARITY IN THE BINDING OF DIVERSE NONNUCLEOSIDE INHIBITORS
Descriptor:HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66), HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51), 5-CHLORO-8-METHYL-7-(3-METHYL-BUT-2-ENYL)-6,7,8,9-TETRAHYDRO-2H-2,7,9A-TRIAZA-BENZO[CD]AZULENE-1-THIONE
Authors:Das, K., Ding, J., Arnold, E.
Deposit date:1995-03-30
Release date:1995-07-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of HIV-1 RT/TIBO R 86183 complex reveals similarity in the binding of diverse nonnucleoside inhibitors.
Nat.Struct.Biol., 2, 1995
5Z2C
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CRYSTAL STRUCTURE OF ALPK-1 N-TERMINAL DOMAIN IN COMPLEX WITH ADP-HEPTOSE
Descriptor:Alpha-protein kinase 1, [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4S,5S,6R)-6-[(1S)-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl] hydrogen phosphate
Authors:Ding, J., She, Y., Shao, F.
Deposit date:2018-01-02
Release date:2018-08-22
Last modified:2018-09-19
Method:X-RAY DIFFRACTION (2.594 Å)
Cite:Alpha-kinase 1 is a cytosolic innate immune receptor for bacterial ADP-heptose.
Nature, 561, 2018
1HPZ
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HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
Descriptor:POL POLYPROTEIN, ALPHA-(2,6-DICHLOROPHENYL)-ALPHA-(2-ACETYL-5-METHYLANILINO)ACETAMIDE
Authors:Ding, J., Hsiou, Y., Arnold, E.
Deposit date:2000-12-13
Release date:2001-05-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Lys103Asn mutation of HIV-1 RT: a novel mechanism of drug resistance.
J.Mol.Biol., 309, 2001
1HQE
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HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
Descriptor:POL POLYPROTEIN
Authors:Ding, J., Hsiou, Y., Arnold, E.
Deposit date:2000-12-15
Release date:2001-05-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Lys103Asn mutation of HIV-1 RT: a novel mechanism of drug resistance.
J.Mol.Biol., 309, 2001
2HTG
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STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF TM VII OF THE NHE1 ISOFORM OF THE NA+/H+ EXCHANGER
Descriptor:NHE1 isoform of Na+/H+ exchanger 1
Authors:Rainey, J.K., Ding, J., Xu, C., Fliegel, L., Sykes, B.D.
Deposit date:2006-07-25
Release date:2006-08-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural and functional characterization of transmembrane segment VII of the Na(+)/H(+) exchanger isoform 1
J.Biol.Chem., 281, 2006