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8DK3
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BU of 8dk3 by Molmil
CryoEM structure of Pseudomonas aeruginosa PA14 JetC ATPase domain bound to DNA and cWHD domain of JetA
Descriptor: DNA (26-MER), JetA, JetC, ...
Authors:Deep, A, Gu, Y, Gao, Y, Ego, K, Herzik, M, Zhou, H, Corbett, K.
Deposit date:2022-07-01
Release date:2022-10-05
Last modified:2022-11-16
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:The SMC-family Wadjet complex protects bacteria from plasmid transformation by recognition and cleavage of closed-circular DNA.
Mol.Cell, 82, 2022
8DK2
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BU of 8dk2 by Molmil
CryoEM structure of Pseudomonas aeruginosa PA14 JetABC in an unclamped state trapped in ATP dependent dimeric form
Descriptor: DNA (26-MER), JetA, JetB, ...
Authors:Deep, A, Gu, Y, Gao, Y, Ego, K, Herzik, M, Zhou, H, Corbett, K.
Deposit date:2022-07-01
Release date:2022-10-05
Last modified:2022-11-16
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:The SMC-family Wadjet complex protects bacteria from plasmid transformation by recognition and cleavage of closed-circular DNA.
Mol.Cell, 82, 2022
8DK1
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BU of 8dk1 by Molmil
CryoEM structure of JetABC (head construct) from Pseudomonas aeruginosa PA14
Descriptor: JetA, JetB, JetC
Authors:Deep, A, Gu, Y, Gao, Y, Ego, K, Herzik, M, Zhou, H, Corbett, K.
Deposit date:2022-07-01
Release date:2022-10-05
Last modified:2022-11-16
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:The SMC-family Wadjet complex protects bacteria from plasmid transformation by recognition and cleavage of closed-circular DNA.
Mol.Cell, 82, 2022
7TIL
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BU of 7til by Molmil
CryoEM structure of JetD from Pseudomonas aeruginosa
Descriptor: JetD
Authors:Deep, A, Gu, Y, Gao, Y, Ego, K, Herzik, M, Zhou, H, Corbett, K.
Deposit date:2022-01-13
Release date:2022-10-05
Last modified:2022-11-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The SMC-family Wadjet complex protects bacteria from plasmid transformation by recognition and cleavage of closed-circular DNA.
Mol.Cell, 82, 2022
7YK3
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BU of 7yk3 by Molmil
Crystal structure of DarTG toxin-antitoxin complex from Mycobacterium tuberculosis
Descriptor: DNA ADP-ribosyl glycohydrolase, DNA ADP-ribosyl transferase, PHOSPHATE ION
Authors:Deep, A, Kaur, J, Singh, L, Thakur, K.G.
Deposit date:2022-07-21
Release date:2023-05-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into DarT toxin neutralization by cognate DarG antitoxin: ssDNA mimicry by DarG C-terminal domain keeps the DarT toxin inhibited.
Structure, 31, 2023
6A7V
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BU of 6a7v by Molmil
Crystal structure of Mycobacterium tuberculosis VapBC11 toxin-antitoxin complex
Descriptor: Antitoxin VapB11, PENTAETHYLENE GLYCOL, Ribonuclease VapC11, ...
Authors:Deep, A, Thakur, K.G.
Deposit date:2018-07-04
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural, functional and biological insights into the role of Mycobacterium tuberculosis VapBC11 toxin-antitoxin system: targeting a tRNase to tackle mycobacterial adaptation.
Nucleic Acids Res., 46, 2018
7C48
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BU of 7c48 by Molmil
Crystal structure of phosphorylated Ser78 form of Rv1045 toxin
Descriptor: Rv1045 toxin, SULFATE ION
Authors:Deep, A, Kaur, J, Thakur, K.G.
Deposit date:2020-05-15
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Rv1045 toxin in it's Ser78 phosphorylated form
To Be Published
7C46
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BU of 7c46 by Molmil
Crystal Structure of Rv1045 toxin point variant K189A
Descriptor: Rv1045 toxin, SULFATE ION
Authors:Deep, A, Kaur, J, Thakur, K.G.
Deposit date:2020-05-15
Release date:2021-05-26
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal Structure of Rv1045 toxin point variant K189A
To Be Published
5WZF
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BU of 5wzf by Molmil
Crystal structure of Mycobacterium tuberculosis VapC20 (Rv2549c), Sarcin-Ricin loop cleaving toxin
Descriptor: 23S rRNA-specific endonuclease VapC20
Authors:Thakur, K.G, Deep, A.
Deposit date:2017-01-17
Release date:2017-10-25
Last modified:2023-03-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of Mycobacterium tuberculosis VapC20 toxin and its interactions with cognate antitoxin, VapB20, suggest a model for toxin-antitoxin assembly.
FEBS J., 284, 2017
5WZ4
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BU of 5wz4 by Molmil
Crystal structure of Mycobacterium tuberculosis VapC20 (Rv2549c), Sarcin-Ricin loop cleaving toxin
Descriptor: 23S rRNA-specific endonuclease VapC20
Authors:Thakur, K.G, Deep, A.
Deposit date:2017-01-17
Release date:2017-10-25
Last modified:2023-03-01
Method:X-RAY DIFFRACTION (1.775 Å)
Cite:Crystal structure of Mycobacterium tuberculosis VapC20 toxin and its interactions with cognate antitoxin, VapB20, suggest a model for toxin-antitoxin assembly.
FEBS J., 284, 2017
7L08
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BU of 7l08 by Molmil
Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.
Descriptor: 12S rRNA, 16S RRNA, 28S ribosomal protein S10, ...
Authors:Koripella, R, Agrawal, E.K, Deep, A, Agrawal, R.K.
Deposit date:2020-12-11
Release date:2021-05-12
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Distinct mechanisms of the human mitoribosome recycling and antibiotic resistance.
Nat Commun, 12, 2021
7UYX
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BU of 7uyx by Molmil
Structure of bacteriophage PA1c gp2
Descriptor: Bacteriophage PA1C gp2
Authors:Enustun, E, Deep, A, Gu, Y, Nguyen, K, Chaikeeratisak, V, Armbruster, E, Ghassemian, M, Pogliano, J, Corbett, K.D.
Deposit date:2022-05-07
Release date:2023-05-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Identification of the bacteriophage nucleus protein interaction network.
Biorxiv, 2023
7SQS
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BU of 7sqs by Molmil
201phi2-1 Chimallin C1 localized reconstruction
Descriptor: Chimallin
Authors:Laughlin, T.G, Deep, A, Prichard, A.M, Seitz, C, Gu, Y, Enustun, E, Suslov, S, Khanna, K, Birkholz, E.A, Amaro, R.E, Pogliano, J, Corbett, K.D, Villa, E.
Deposit date:2021-11-06
Release date:2022-07-27
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Architecture and self-assembly of the jumbo bacteriophage nuclear shell.
Nature, 608, 2022
7SQQ
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BU of 7sqq by Molmil
201Phi2-1 Chimallin Cubic (O, 24mer) assembly
Descriptor: Chimallin
Authors:Laughlin, T.G, Deep, A, Prichard, A.M, Seitz, C, Gu, Y, Enustun, E, Suslov, S, Khanna, K, Birkholz, E.A, Amaro, R.E, Pogliano, J, Corbett, K.D, Villa, E.
Deposit date:2021-11-06
Release date:2022-07-27
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Architecture and self-assembly of the jumbo bacteriophage nuclear shell.
Nature, 608, 2022
7SQT
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BU of 7sqt by Molmil
Goslar chimallin cubic (O, 24mer) assembly
Descriptor: Chimallin
Authors:Laughlin, T.G, Deep, A, Prichard, A.M, Seitz, C, Gu, Y, Enustun, E, Suslov, S, Khanna, K, Birkholz, E.A, Amaro, R.E, Pogliano, J, Corbett, K.D, Villa, E.
Deposit date:2021-11-06
Release date:2022-07-27
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Architecture and self-assembly of the jumbo bacteriophage nuclear shell.
Nature, 608, 2022
7SQV
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BU of 7sqv by Molmil
Goslar chimallin C1 localized reconstruction
Descriptor: Chimallin
Authors:Laughlin, T.G, Deep, A, Prichard, A.M, Seitz, C, Gu, Y, Enustun, E, Suslov, S, Khanna, K, Birkholz, E.A, Amaro, R.E, Pogliano, J, Corbett, K.D, Villa, E.
Deposit date:2021-11-06
Release date:2022-07-27
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Architecture and self-assembly of the jumbo bacteriophage nuclear shell.
Nature, 608, 2022
7SQR
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BU of 7sqr by Molmil
201phi2-1 Chimallin localized tetramer reconstruction
Descriptor: Chimallin
Authors:Laughlin, T.G, Deep, A, Prichard, A.M, Seitz, C, Gu, Y, Enustun, E, Suslov, S, Khanna, K, Birkholz, E.A, Amaro, R.E, Pogliano, J, Corbett, K.D, Villa, E.
Deposit date:2021-11-06
Release date:2022-07-27
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Architecture and self-assembly of the jumbo bacteriophage nuclear shell.
Nature, 608, 2022
7SQU
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BU of 7squ by Molmil
Goslar chimallin C4 tetramer localized reconstruction
Descriptor: Chimallin
Authors:Laughlin, T.G, Deep, A, Prichard, A.M, Seitz, C, Gu, Y, Enustun, E, Suslov, S, Khanna, K, Birkholz, E.A, Amaro, R.E, Pogliano, J, Corbett, K.D, Villa, E.
Deposit date:2021-11-06
Release date:2022-07-27
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Architecture and self-assembly of the jumbo bacteriophage nuclear shell.
Nature, 608, 2022
7L20
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BU of 7l20 by Molmil
Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.
Descriptor: 16S rRNA mitochondrial, 39 S P-site finger, 39S ribosomal protein L10, ...
Authors:Agrawal, E, Koripella, R.
Deposit date:2020-12-15
Release date:2021-05-12
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Distinct mechanisms of the human mitoribosome recycling and antibiotic resistance.
Nat Commun, 12, 2021
7XQC
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BU of 7xqc by Molmil
Crystal structure of N-terminal domain of Rv2908c fused with Maltose Binding Protein (MBP)
Descriptor: DI(HYDROXYETHYL)ETHER, Fusion protein of Maltose-binding periplasmic protein and RNA-binding protein KhpA
Authors:Thakur, K.G, Singh, A, Kapoor, S, Deep, A.
Deposit date:2022-05-07
Release date:2023-05-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of N-terminal domain of Rv2908c fused with Maltose Binding Protein (MBP)
To Be Published

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