Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4WUH
DownloadVisualize
BU of 4wuh by Molmil
Crystal structure of E. faecalis DNA binding domain LiaR wild type complexed with 22bp DNA
Descriptor: DNA (5'-D(P*AP*AP*AP*TP*CP*G)-3'), DNA (5'-D(P*GP*GP*AP*CP*TP*TP*AP*AP*GP*AP*AP*CP*GP*AP*TP*TP*T)-3'), DNA (5'-D(P*TP*TP*CP*TP*TP*AP*AP*GP*TP*CP*C)-3'), ...
Authors:Davlieva, M, Shamoo, Y.
Deposit date:2014-10-31
Release date:2015-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.294 Å)
Cite:A variable DNA recognition site organization establishes the LiaR-mediated cell envelope stress response of enterococci to daptomycin.
Nucleic Acids Res., 43, 2015
5HEV
DownloadVisualize
BU of 5hev by Molmil
Crystal Structure of the beryllofluoride-activated LiaR from Enterococcus faecium
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Response regulator protein VraR
Authors:Davlieva, M, Shamoo, Y.
Deposit date:2016-01-06
Release date:2016-11-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.192 Å)
Cite:An Adaptive Mutation in Enterococcus faecium LiaR Associated with Antimicrobial Peptide Resistance Mimics Phosphorylation and Stabilizes LiaR in an Activated State.
J.Mol.Biol., 428, 2016
4PDB
DownloadVisualize
BU of 4pdb by Molmil
CRYSTAL STRUCTURE OF BACILLUS ANTHRACIS RIBOSOMAL PROTEIN S8 IN COMPLEX WITH AN RNA APTAMER
Descriptor: 30S ribosomal protein S8, SELEX RNA aptamer
Authors:Davlieva, M, Shamoo, Y, Nikonowicz, E.P.
Deposit date:2014-04-17
Release date:2014-09-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure analysis of free and bound states of an RNA aptamer against ribosomal protein S8 from Bacillus anthracis.
Nucleic Acids Res., 42, 2014
4WSZ
DownloadVisualize
BU of 4wsz by Molmil
Crystal structure of the DNA binding domains of wild type LiaR from E. faecalis
Descriptor: ACETATE ION, GLYCEROL, PRASEODYMIUM ION, ...
Authors:Davlieva, M, Shamoo, Y.
Deposit date:2014-10-29
Release date:2015-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.769 Å)
Cite:A variable DNA recognition site organization establishes the LiaR-mediated cell envelope stress response of enterococci to daptomycin.
Nucleic Acids Res., 43, 2015
4WT0
DownloadVisualize
BU of 4wt0 by Molmil
Crystal structure of the DNA binding domains of LiaRD191N from E. faecalis
Descriptor: PRASEODYMIUM ION, Response regulator receiver domain protein
Authors:Davlieva, M, Shamoo, Y.
Deposit date:2014-10-29
Release date:2015-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A variable DNA recognition site organization establishes the LiaR-mediated cell envelope stress response of enterococci to daptomycin.
Nucleic Acids Res., 43, 2015
4WUL
DownloadVisualize
BU of 4wul by Molmil
Crystal structure of E. faecalis DNA binding domain LiaRD191N complexed with 26bp DNA
Descriptor: DNA (26-MER), Response regulator receiver domain protein
Authors:Davlieva, M, Shamoo, Y.
Deposit date:2014-11-02
Release date:2015-05-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A variable DNA recognition site organization establishes the LiaR-mediated cell envelope stress response of enterococci to daptomycin.
Nucleic Acids Res., 43, 2015
4WU4
DownloadVisualize
BU of 4wu4 by Molmil
Crystal structure of E. faecalis DNA binding domain LiaRD191N complexed with 22bp DNA
Descriptor: DNA (5'-D(P*AP*AP*AP*TP*CP*GP*TP*TP*CP*TP*TP*AP*AP*GP*TP*CP*C)-3'), DNA (5'-D(P*GP*GP*AP*CP*TP*TP*AP*AP*GP*AP*AP*CP*GP*AP*TP*TP*T)-3'), GLYCEROL, ...
Authors:Davlieva, M, Shamoo, Y.
Deposit date:2014-10-31
Release date:2015-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A variable DNA recognition site organization establishes the LiaR-mediated cell envelope stress response of enterococci to daptomycin.
Nucleic Acids Res., 43, 2015
6C0Z
DownloadVisualize
BU of 6c0z by Molmil
Crystal structure of Efga from Methylobacterium extorquens in complex with formaldehyde
Descriptor: Efga, FORMIC ACID, oxydimethanol
Authors:Shamoo, Y, Davlieva, M.
Deposit date:2018-01-03
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of Efga form Methylobacterium extorquens in complex with formaldehyde
To Be Published
3P9U
DownloadVisualize
BU of 3p9u by Molmil
Crystal structure of TetX2 from Bacteroides thetaiotaomicron with substrate analogue
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, TetX2 protein
Authors:Walkiewicz, K, Davlieva, M, Sun, C, Lau, K, Shamoo, Y.
Deposit date:2010-10-18
Release date:2011-04-27
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystal structure of Bacteroides thetaiotaomicron TetX2: a tetracycline degrading monooxygenase at 2.8 A resolution.
Proteins, 79, 2011
3S46
DownloadVisualize
BU of 3s46 by Molmil
The crystal structure of alanine racemase from streptococcus pneumoniae
Descriptor: Alanine racemase, BENZOIC ACID
Authors:Im, H, Sharpe, M.L, Strych, U, Davlieva, M, Krause, K.L.
Deposit date:2011-05-18
Release date:2011-06-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of alanine racemase from Streptococcus pneumoniae, a target for structure-based drug design.
BMC MICROBIOL., 11, 2011
6C84
DownloadVisualize
BU of 6c84 by Molmil
Crystal structure of PBP5 from Enterococcus faecium
Descriptor: Penicillin-binding protein
Authors:Shamoo, Y, Davlieva, M.
Deposit date:2018-01-24
Release date:2019-02-06
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (2.511 Å)
Cite:Crystal structure of PBP5 from Enterococcus faecium
To Be Published
6BWS
DownloadVisualize
BU of 6bws by Molmil
Crystal structure of Efga from Methylobacterium extorquens
Descriptor: Glycolate utilization protein
Authors:Shamoo, Y, Davlieva, M.
Deposit date:2017-12-15
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of Efga from Methylobacterium extorquens
To Be Published
3HA1
DownloadVisualize
BU of 3ha1 by Molmil
Alanine racemase from Bacillus Anthracis (Ames)
Descriptor: ACETATE ION, Alanine racemase, CHLORIDE ION
Authors:Counago, R.M, Davlieva, M, Strych, U, Hill, R.E, Krause, K.L.
Deposit date:2009-04-30
Release date:2009-09-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Biochemical and structural characterization of alanine racemase from Bacillus anthracis (Ames).
Bmc Struct.Biol., 9, 2009
3FB4
DownloadVisualize
BU of 3fb4 by Molmil
Crystal structure of adenylate kinase from Marinibacillus marinus
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION
Authors:Davlieva, M.G, Shamoo, Y.
Deposit date:2008-11-18
Release date:2009-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and biochemical characterization of an adenylate kinase originating from the psychrophilic organism Marinibacillus marinus.
Acta Crystallogr.,Sect.F, 65, 2009
3H86
DownloadVisualize
BU of 3h86 by Molmil
Crystal structure of adenylate kinase from Methanococcus maripaludis
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Milya, D.G, Yousif, S.
Deposit date:2009-04-28
Release date:2009-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a trimeric archaeal adenylate kinase from the mesophile Methanococcus maripaludis with an unusually broad functional range and thermal stability.
Proteins, 78, 2009

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon