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1LAC
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BU of 1lac by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE LIPOYL DOMAIN FROM BACILLUS STEAROTHERMOPHILUS PYRUVATE DEHYDROGENASE MULTIENZYME COMPLEX
Descriptor: DIHYDROLIPOAMIDE ACETYLTRANSFERASE
Authors:Dardel, F, Davis, A.L, Laue, E.D, Perham, R.N.
Deposit date:1992-09-02
Release date:1993-07-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Three-dimensional structure of the lipoyl domain from Bacillus stearothermophilus pyruvate dehydrogenase multienzyme complex.
J.Mol.Biol., 229, 1993
1LAB
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BU of 1lab by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE LIPOYL DOMAIN FROM BACILLUS STEAROTHERMOPHILUS PYRUVATE DEHYDROGENASE MULTIENZYME COMPLEX
Descriptor: DIHYDROLIPOAMIDE ACETYLTRANSFERASE
Authors:Dardel, F, Davis, A.L, Laue, E.D, Perham, R.N.
Deposit date:1992-09-02
Release date:1993-07-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Three-dimensional structure of the lipoyl domain from Bacillus stearothermophilus pyruvate dehydrogenase multienzyme complex.
J.Mol.Biol., 229, 1993
2DEF
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BU of 2def by Molmil
PEPTIDE DEFORMYLASE CATALYTIC CORE (RESIDUES 1-147), NMR, 20 STRUCTURES
Descriptor: NICKEL (II) ION, PEPTIDE DEFORMYLASE
Authors:Meinnel, T, Dardel, F.
Deposit date:1997-12-15
Release date:1998-03-18
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of nickel-peptide deformylase.
J.Mol.Biol., 280, 1998
2IFE
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BU of 2ife by Molmil
TRANSLATION INITIATION FACTOR IF3 FROM ESCHERICHIA COLI RIBOSOME BINDING DOMAIN (RESIDUES 84-180)
Descriptor: PROTEIN (TRANSLATION INITIATION FACTOR IF3)
Authors:De Cock, E, Garcia, C, Dardel, F.
Deposit date:1998-12-16
Release date:1998-12-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Interaction of E. Coli Translation Initiation Factor If3 with the Ribosome
To be Published
1S1N
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BU of 1s1n by Molmil
SH3 domain of human nephrocystin
Descriptor: Nephrocystin 1
Authors:Le Maire, A, Weber, T, Saunier, S, Antignac, C, Ducruix, A, Dardel, F.
Deposit date:2004-01-07
Release date:2005-01-18
Last modified:2018-01-24
Method:SOLUTION NMR
Cite:Solution NMR structure of the SH3 domain of human nephrocystin and analysis of a mutation-causing juvenile nephronophthisis.
Proteins, 59, 2005
1GYZ
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BU of 1gyz by Molmil
Bacterial ribosomal protein L20 from Aquifex aeolicus
Descriptor: 50S RIBOSOMAL PROTEIN L20
Authors:Raibaud, S, Lebars, I, Bontems, F, Dardel, F.
Deposit date:2002-05-02
Release date:2002-05-10
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR Structure of Bacterial Ribosomal Protein L20: Implications for Ribosome Assembly and Translational Control
J.Mol.Biol., 323, 2002
1DEF
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BU of 1def by Molmil
PEPTIDE DEFORMYLASE CATALYTIC CORE (RESIDUES 1-147), NMR, 9 STRUCTURES
Descriptor: PEPTIDE DEFORMYLASE, ZINC ION
Authors:Meinnel, T, Dardel, F.
Deposit date:1996-03-19
Release date:1997-04-21
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:A new subclass of the zinc metalloproteases superfamily revealed by the solution structure of peptide deformylase.
J.Mol.Biol., 262, 1996
3CW6
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BU of 3cw6 by Molmil
E. coli Initiator tRNA
Descriptor: Initiator tRNA
Authors:Barraud, P, Schmitt, E, Mechulam, Y, Dardel, F, Tisne, C.
Deposit date:2008-04-21
Release date:2008-09-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A unique conformation of the anticodon stem-loop is associated with the capacity of tRNAfMet to initiate protein synthesis.
Nucleic Acids Res., 36, 2008
3CW5
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BU of 3cw5 by Molmil
E. coli Initiator tRNA
Descriptor: Initiator tRNA
Authors:Barraud, P, Schmitt, E, Mechulam, Y, Dardel, F, Tisne, C.
Deposit date:2008-04-21
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A unique conformation of the anticodon stem-loop is associated with the capacity of tRNAfMet to initiate protein synthesis.
Nucleic Acids Res., 36, 2008
2PRB
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BU of 2prb by Molmil
crystal structure of aminoglycoside acetyltransferase AAC(6')-Ib in complex whith coenzyme A
Descriptor: Aminoglycoside 6-N-acetyltransferase type Ib11, COENZYME A
Authors:Maurice, F, Broutin, I, Podglajen, I, Benas, P, Collatz, E, Dardel, F.
Deposit date:2007-05-04
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Enzyme structural plasticity and the emergence of broad-spectrum antibiotic resistance.
Embo Rep., 9, 2008
2PR8
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BU of 2pr8 by Molmil
crystal structure of aminoglycoside N-acetyltransferase AAC(6')-Ib11
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Aminoglycoside 6-N-acetyltransferase type Ib11
Authors:Maurice, F, Broutin, I, Podglajen, I, Benas, P, Collatz, E, Dardel, F.
Deposit date:2007-05-04
Release date:2008-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Enzyme structural plasticity and the emergence of broad-spectrum antibiotic resistance.
Embo Rep., 9, 2008
2QIR
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BU of 2qir by Molmil
Crystal structure of aminoglycoside acetyltransferase AAC(6')-Ib in complex whith coenzyme A and kanamycin
Descriptor: (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE, Aminoglycoside 6-N-acetyltransferase type Ib11, COENZYME A
Authors:Maurice, F, Broutin, I, Podglajen, I, Benas, P, Collatz, E, Dardel, F.
Deposit date:2007-07-05
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Enzyme structural plasticity and the emergence of broad-spectrum antibiotic resistance.
Embo Rep., 9, 2008
2G1W
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BU of 2g1w by Molmil
NMR structure of the Aquifex aeolicus tmRNA pseudoknot PK1
Descriptor: 5'-R(*GP*GP*GP*GP*UP*GP*GP*CP*UP*CP*CP*CP*CP*UP*AP*AP*CP*AP*GP*CP*CP*G)-3'
Authors:Nonin-Lecomte, S, Dardel, F.
Deposit date:2006-02-15
Release date:2006-04-11
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:NMR structure of the Aquifex aeolicus tmRNA pseudoknot PK1: new insights into the recoding event of the ribosomal trans-translation.
Nucleic Acids Res., 34, 2006
1KRS
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BU of 1krs by Molmil
SOLUTION STRUCTURE OF THE ANTICODON BINDING DOMAIN OF ESCHERICHIA COLI LYSYL-TRNA SYNTHETASE AND STUDIES OF ITS INTERACTIONS WITH TRNA-LYS
Descriptor: LYSYL-TRNA SYNTHETASE (PRODUCT OF LYSS GENE)
Authors:Commans, S, Dardel, F.
Deposit date:1995-06-09
Release date:1995-09-15
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of the anticodon-binding domain of Escherichia coli lysyl-tRNA synthetase and studies of its interaction with tRNA(Lys).
J.Mol.Biol., 253, 1995
1KRT
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BU of 1krt by Molmil
SOLUTION STRUCTURE OF THE ANTICODON BINDING DOMAIN OF ESCHERICHIA COLI LYSYL-TRNA SYNTHETASE AND STUDIES OF ITS INTERACTIONS WITH TRNA-LYS
Descriptor: LYSYL-TRNA SYNTHETASE (PRODUCT OF LYSS GENE)
Authors:Commans, S, Dardel, F.
Deposit date:1995-06-09
Release date:1995-09-15
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of the anticodon-binding domain of Escherichia coli lysyl-tRNA synthetase and studies of its interaction with tRNA(Lys).
J.Mol.Biol., 253, 1995
1MEA
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BU of 1mea by Molmil
METHIONYL-TRNA SYNTHETASE ZINC BINDING DOMAIN. 3D STRUCTURE AND HOMOLOGY WITH RUBREDOXIN AND GAG RETROVIRAL PROTEINS
Descriptor: METHIONYL-tRNA SYNTHETASE, ZINC ION
Authors:Fourmy, D, Dardel, F.
Deposit date:1992-11-09
Release date:1993-10-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Methionyl-tRNA synthetase zinc binding domain. Three-dimensional structure and homology with rubredoxin and gag retroviral proteins.
J.Mol.Biol., 231, 1993
1MED
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BU of 1med by Molmil
METHIONYL-TRNA SYNTHETASE ZINC BINDING DOMAIN. 3D STRUCTURE AND HOMOLOGY WITH RUBREDOXIN AND GAG RETROVIRAL PROTEINS
Descriptor: METHIONYL-tRNA SYNTHETASE, ZINC ION
Authors:Fourmy, D, Dardel, F.
Deposit date:1992-11-09
Release date:1993-10-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Methionyl-tRNA synthetase zinc binding domain. Three-dimensional structure and homology with rubredoxin and gag retroviral proteins.
J.Mol.Biol., 231, 1993
1ZY1
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BU of 1zy1 by Molmil
X-ray structure of peptide deformylase from Arabidopsis thaliana (AtPDF1A) in complex with Met-Ala-Ser
Descriptor: Peptide deformylase, mitochondrial, ZINC ION, ...
Authors:Fieulaine, S, Juillan-Binard, C, Serero, A, Dardel, F, Giglione, C, Meinnel, T, Ferrer, J.-L.
Deposit date:2005-06-09
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structure of mitochondrial (Type 1A) peptide deformylase provides clear guidelines for the design of inhibitors specific for the bacterial forms
J.Biol.Chem., 280, 2005
1ZXZ
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BU of 1zxz by Molmil
X-ray structure of peptide deformylase from Arabidopsis thaliana (AtPDF1A); crystals grown in PEG-5000 MME as precipitant
Descriptor: Peptide deformylase, mitochondrial, ZINC ION
Authors:Fieulaine, S, Juillan-Binard, C, Serero, A, Dardel, F, Giglione, C, Meinnel, T, Ferrer, J.-L.
Deposit date:2005-06-09
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of mitochondrial (Type 1A) peptide deformylase provides clear guidelines for the design of inhibitors specific for the bacterial forms
J.Biol.Chem., 280, 2005
1ZY0
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BU of 1zy0 by Molmil
X-ray structure of peptide deformylase from Arabidopsis thaliana (AtPDF1A); crystals grown in PEG-6000
Descriptor: Peptide deformylase, mitochondrial, ZINC ION
Authors:Fieulaine, S, Juillan-Binard, C, Serero, A, Dardel, F, Giglione, C, Meinnel, T, Ferrer, J.-L.
Deposit date:2005-06-09
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of mitochondrial (Type 1A) peptide deformylase provides clear guidelines for the design of inhibitors specific for the bacterial forms
J.Biol.Chem., 280, 2005
2PWY
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BU of 2pwy by Molmil
Crystal Structure of a m1A58 tRNA methyltransferase
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, tRNA (adenine-N(1)-)-methyltransferase
Authors:Barraud, P, Golinelli-Pimpaneau, B, Tisne, C.
Deposit date:2007-05-14
Release date:2008-02-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Thermus thermophilus tRNA m(1)A(58) Methyltransferase and Biophysical Characterization of Its Interaction with tRNA.
J.Mol.Biol., 377, 2008
3M6Q
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BU of 3m6q by Molmil
Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B) G41Q mutant in complex with actinonin
Descriptor: ACTINONIN, Peptide deformylase 1B, ZINC ION
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2010-03-16
Release date:2011-03-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Trapping conformational states along ligand-binding dynamics of peptide deformylase: the impact of induced fit on enzyme catalysis
Plos Biol., 9, 2011
3M6O
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BU of 3m6o by Molmil
Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B)
Descriptor: Peptide deformylase 1B, ZINC ION
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2010-03-16
Release date:2011-03-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Trapping conformational states along ligand-binding dynamics of peptide deformylase: the impact of induced fit on enzyme catalysis
Plos Biol., 9, 2011
3M6R
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BU of 3m6r by Molmil
Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B) G41M mutant in complex with actinonin
Descriptor: ACTINONIN, Peptide deformylase 1B, ZINC ION
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2010-03-16
Release date:2011-03-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Trapping conformational states along ligand-binding dynamics of peptide deformylase: the impact of induced fit on enzyme catalysis
Plos Biol., 9, 2011
3M6P
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BU of 3m6p by Molmil
Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B) in complex with actinonin
Descriptor: ACTINONIN, Peptide deformylase 1B, ZINC ION
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2010-03-16
Release date:2011-03-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Trapping conformational states along ligand-binding dynamics of peptide deformylase: the impact of induced fit on enzyme catalysis
Plos Biol., 9, 2011

 

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