Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7CJ2
DownloadVisualize
BU of 7cj2 by Molmil
Crystal structure of the Fab antibody complexed with human YKL-40
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase 3-like 1 (Cartilage glycoprotein-39), isoform CRA_a, ...
Authors:Choi, S, Na, J.H, Lee, S.J, Woo, J.R, Kim, D.Y, Hong, J.T, Lee, W.K.
Deposit date:2020-07-09
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the Fab antibody complexed with human YKL-40
To Be Published
7E42
DownloadVisualize
BU of 7e42 by Molmil
Solution strucutre of holo acyl carrier protein from Acinetobacter baumannii
Descriptor: Acyl carrier protein
Authors:Choi, S, Park, J, Kim, Y.
Deposit date:2021-02-10
Release date:2022-02-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:solution structure of holo acyl carrier protein in acinetobacter baumannii
To Be Published
3W5K
DownloadVisualize
BU of 3w5k by Molmil
Crystal structure of Snail1 and importin beta complex
Descriptor: Importin subunit beta-1, ZINC ION, Zinc finger protein SNAI1
Authors:Choi, S, Yamashita, E, Yasuhara, N, Song, J, Son, S.Y, Won, Y.H, Shin, Y.S, Sekimoto, T, Park, I.Y, Yoneda, Y, Lee, S.J.
Deposit date:2013-01-30
Release date:2014-03-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the selective nuclear import of the C2H2 zinc-finger protein Snail by importin beta.
Acta Crystallogr.,Sect.D, 70, 2014
3OYY
DownloadVisualize
BU of 3oyy by Molmil
Structure of Pseudomonas aeruginosa elongation factor P
Descriptor: Elongation factor P, PHOSPHATE ION
Authors:Choe, J, Choi, S.
Deposit date:2010-09-24
Release date:2011-03-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of elongation factor P from Pseudomonas aeruginosa at 1.75 angstrom resolution.
Proteins, 79, 2011
2A4V
DownloadVisualize
BU of 2a4v by Molmil
Crystal Structure of a truncated mutant of yeast nuclear thiol peroxidase
Descriptor: Peroxiredoxin DOT5
Authors:Choi, J, Choi, S, Chon, J.-K, Choi, J, Cha, M.-K, Kim, I.-H, Shin, W.
Deposit date:2005-06-29
Release date:2006-03-14
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the C107S/C112S mutant of yeast nuclear 2-Cys peroxiredoxin
Proteins, 61, 2005
1QXH
DownloadVisualize
BU of 1qxh by Molmil
Crystal Structure of Escherichia coli Thiol Peroxidase in the Oxidized State
Descriptor: Thiol peroxidase
Authors:Choi, J, Choi, S, Choi, J, Shin, W.
Deposit date:2003-09-06
Release date:2004-01-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Escherichia coli thiol peroxidase in the oxidized state: insights into intramolecular disulfide formation and substrate binding in atypical 2-Cys peroxiredoxins
J.Biol.Chem., 278, 2003
8HEJ
DownloadVisualize
BU of 8hej by Molmil
Crystal structure of Transthyretin in complex with a covalent inhibitor trans-styrylpyrazole
Descriptor: 2,4,6-trifluorobenzaldehyde, 2,6-dibromo-4-[(E)-2-(3,5-dimethyl-1H-pyrazol-4-yl)ethenyl]phenol, Transthyretin
Authors:Kim, H, Choi, S, Lee, C.
Deposit date:2022-11-08
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal structure of Transthyretin in complex with a covalent inhibitor trans-styrylpyrazole
To Be Published
8CU6
DownloadVisualize
BU of 8cu6 by Molmil
Crystal structure of A2AAR-StaR2-S277-bRIL in complex with a novel A2a antagonist, LJ-4517
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2R,3R,4R)-2-[(8P)-6-amino-2-(hex-1-yn-1-yl)-8-(thiophen-2-yl)-9H-purin-9-yl]oxolane-3,4-diol, Adenosine receptor A2a,Soluble cytochrome b562, ...
Authors:Shiriaeva, A, Park, D.-J, Kim, G, Lee, Y, Hou, X, Jarhad, D.B, Kim, G, Yu, J, Hyun, Y.E, Kim, W, Gao, Z.-G, Jacobson, K.A, Han, G.W, Stevens, R.C, Jeong, L.S, Choi, S, Cherezov, V.
Deposit date:2022-05-16
Release date:2022-08-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:GPCR Agonist-to-Antagonist Conversion: Enabling the Design of Nucleoside Functional Switches for the A 2A Adenosine Receptor.
J.Med.Chem., 65, 2022
8CU7
DownloadVisualize
BU of 8cu7 by Molmil
Crystal structure of A2AAR-StaR2-bRIL in complex with a novel A2a antagonist, LJ-4517
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2R,3R,4R)-2-[(8P)-6-amino-2-(hex-1-yn-1-yl)-8-(thiophen-2-yl)-9H-purin-9-yl]oxolane-3,4-diol, Adenosine receptor A2a,Soluble cytochrome b562, ...
Authors:Shiriaeva, A, Park, D.-J, Kim, G, Lee, Y, Hou, X, Jarhad, D.B, Kim, G, Yu, J, Hyun, Y.E, Kim, W, Gao, Z.-G, Jacobson, K.A, Han, G.W, Stevens, R.C, Jeong, L.S, Choi, S, Cherezov, V.
Deposit date:2022-05-16
Release date:2022-08-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:GPCR Agonist-to-Antagonist Conversion: Enabling the Design of Nucleoside Functional Switches for the A 2A Adenosine Receptor.
J.Med.Chem., 65, 2022
3E4A
DownloadVisualize
BU of 3e4a by Molmil
Human IDE-inhibitor complex at 2.6 angstrom resolution
Descriptor: 1,4-DIETHYLENE DIOXIDE, ACETIC ACID, HYDROXAMATE PEPTIDE II1, ...
Authors:Malito, E, Leissring, M.A, Choi, S, Cuny, G.D, Tang, W.J.
Deposit date:2008-08-11
Release date:2009-05-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Designed inhibitors of insulin-degrading enzyme regulate the catabolism and activity of insulin.
Plos One, 5, 2010
5TZL
DownloadVisualize
BU of 5tzl by Molmil
Structure of transthyretin in complex with the kinetic stabilizer 201
Descriptor: 4-(7-chloro-1,3-benzoxazol-2-yl)-2,6-diiodophenol, Transthyretin
Authors:Connelly, S, Mortenson, D.E, Choi, S, Wilson, I.A, Powers, E.T, Kelly, J.W, Johnson, S.M.
Deposit date:2016-11-21
Release date:2017-06-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Semi-quantitative models for identifying potent and selective transthyretin amyloidogenesis inhibitors.
Bioorg. Med. Chem. Lett., 27, 2017
3B1F
DownloadVisualize
BU of 3b1f by Molmil
Crystal structure of prephenate dehydrogenase from Streptococcus mutans
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative prephenate dehydrogenase
Authors:Ku, H.K, Do, N.H, Song, J.S, Choi, S, Shin, M.H, Kim, K.J, Lee, S.J.
Deposit date:2011-07-02
Release date:2011-10-26
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of prephenate dehydrogenase from Streptococcus mutans.
Int.J.Biol.Macromol., 49, 2011
4KY2
DownloadVisualize
BU of 4ky2 by Molmil
Transthyretin in complex with the fluorescent folding sensor (E)-7-hydroxy-3-(4-hydroxy-3,5-dimethylstyryl)-4-methyl-2H-chromen-2-one
Descriptor: 7-hydroxy-3-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]-4-methyl-2H-chromen-2-one, Transthyretin
Authors:Connelly, S, Wilson, I.A, Choi, S.
Deposit date:2013-05-28
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Bifunctional coumarin derivatives that inhibit transthyretin amyloidogenesis and serve as fluorescent transthyretin folding sensors.
Chem.Commun.(Camb.), 49, 2013
7D5Y
DownloadVisualize
BU of 7d5y by Molmil
Cystein protease domain from MARTX toxin
Descriptor: GLYCEROL, MARTX
Authors:Kim, M.-H, Hwang, J, Choi, S.
Deposit date:2020-09-28
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cystein protease domain from MARTX toxin
To Be Published
6II2
DownloadVisualize
BU of 6ii2 by Molmil
Crystal structure of alpha-beta hydrolase (ABH) and Makes Caterpillars Floppy (MCF)-Like effectors of Vibrio vulnificus MO6-24/O
Descriptor: Putative RTX-toxin
Authors:Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyung, J, Lee, C, Eom, S.H, Kim, M.H.
Deposit date:2018-10-03
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6II0
DownloadVisualize
BU of 6ii0 by Molmil
Crystal structure of the Makes Caterpillars Floppy (MCF)-Like effector of Vibrio vulnificus MO6-24/O
Descriptor: GLYCEROL, Putative RTX-toxin
Authors:Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyun, J, Lee, C, Eom, S.H, Kim, M.H.
Deposit date:2018-10-03
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6II6
DownloadVisualize
BU of 6ii6 by Molmil
Crystal structure of the Makes Caterpillars Floppy (MCF)-Like effector of Vibrio vulnificus MO6-24/O in complex with a human ADP-ribosylation factor 3 (ARF3)
Descriptor: ADP-ribosylation factor 3, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyun, J, Lee, C, Eom, S.H, Kim, M.H.
Deposit date:2018-10-03
Release date:2019-08-07
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
3TVZ
DownloadVisualize
BU of 3tvz by Molmil
Structure of Bacillus subtilis HmoB
Descriptor: Putative uncharacterized protein yhgC
Authors:Choe, J, Choi, S, Park, S.
Deposit date:2011-09-21
Release date:2012-07-11
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bacillus subtilis HmoB is a heme oxygenase with a novel structure.
Bmb Rep, 45, 2012
3WVZ
DownloadVisualize
BU of 3wvz by Molmil
Crystal structure of Hikeshi, a new nuclear transport receptor of Hsp70
Descriptor: Protein Hikeshi
Authors:Song, J, Kose, S, Watanabe, A, Son, S.Y, Choi, S, Hong, R.H, Yamashita, E, Park, I.Y, Imamoto, N, Lee, S.J.
Deposit date:2014-06-12
Release date:2015-03-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural and functional analysis of Hikeshi, a new nuclear transport receptor of Hsp70s
Acta Crystallogr.,Sect.D, 71, 2015
3WW0
DownloadVisualize
BU of 3ww0 by Molmil
Crystal structure of F97A mutant, a new nuclear transport receptor of Hsp70
Descriptor: Protein Hikeshi
Authors:Song, J, Kose, S, Watanabe, A, Son, S.Y, Choi, S, Hong, R.H, Yamashita, E, Park, I.Y, Imamoto, N, Lee, S.J.
Deposit date:2014-06-12
Release date:2015-03-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional analysis of Hikeshi, a new nuclear transport receptor of Hsp70s
Acta Crystallogr.,Sect.D, 71, 2015
4LUB
DownloadVisualize
BU of 4lub by Molmil
X-ray structure of prephenate dehydratase from Streptococcus mutans
Descriptor: Putative prephenate dehydratase
Authors:Shin, H.H, Ku, H.K, Song, J.S, Choi, S, Son, S.Y.
Deposit date:2013-07-25
Release date:2014-02-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structure of prephenate dehydratase from Streptococcus mutans
TO BE PUBLISHED
3NJ4
DownloadVisualize
BU of 3nj4 by Molmil
Fluoro-neplanocin A in Human S-Adenosylhomocysteine Hydrolase
Descriptor: (4S,5S)-4-(6-amino-9H-purin-9-yl)-3-fluoro-5-hydroxy-2-(hydroxymethyl)cyclopent-2-en-1-one, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Jeong, L.S, Lee, K.M, Hwang, K.Y, Choi, S, Heo, Y.S.
Deposit date:2010-06-17
Release date:2011-05-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray crystal structure and binding mode analysis of human S-adenosylhomocysteine hydrolase complexed with novel mechanism-based inhibitors, haloneplanocin A analogues.
J.Med.Chem., 54, 2011
4BGG
DownloadVisualize
BU of 4bgg by Molmil
Crystal structure of the ACVR1 kinase in complex with LDN-213844
Descriptor: 1,2-ETHANEDIOL, 1-{4-[5-(3,4,5-trimethoxyphenyl)pyridin-3-yl]phenyl}piperazine, ACTIVIN RECEPTOR TYPE-1, ...
Authors:Sanvitale, C, Canning, P, Cooper, C, Wang, Y, Mohedas, A.H, Choi, S, Yu, P.B, Cuny, G.D, Nowak, R, Coutandin, D, Vollmar, M, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A, Structural Genomics Consortium (SGC)
Deposit date:2013-03-26
Release date:2013-04-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Structure-Activity Relationship of 3,5-Diaryl-2-Aminopyridine Alk2 Inhibitors Reveals Unaltered Binding Affinity for Fibrodysplasia Ossificans Progressiva Causing Mutants.
J.Med.Chem., 57, 2014
3HJ0
DownloadVisualize
BU of 3hj0 by Molmil
Transthyretin in complex with a covalent small molecule kinetic stabilizer
Descriptor: 4-fluorophenyl 3-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]benzoate, Transthyretin
Authors:Connelly, S, Wilson, I.A, Kelly, J.W.
Deposit date:2009-05-20
Release date:2009-12-22
Last modified:2014-11-19
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Chemoselective small molecules that covalently modify one lysine in a non-enzyme protein in plasma.
Nat.Chem.Biol., 6, 2010
3IMW
DownloadVisualize
BU of 3imw by Molmil
Transthyretin in complex with (E)-2,6-dibromo-4-(2,6-dimethoxystyryl)aniline
Descriptor: 2,6-dibromo-4-[(E)-2-(2,6-dimethoxyphenyl)ethenyl]aniline, Transthyretin
Authors:Connelly, S, Wilson, I.A.
Deposit date:2009-08-11
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:A substructure combination strategy to create potent and selective transthyretin kinetic stabilizers that prevent amyloidogenesis and cytotoxicity.
J.Am.Chem.Soc., 132, 2010

 

123>

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon