Author results

2PWX
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CRYSTAL STRUCTURE OF G11A MUTANT OF SARS-COV 3C-LIKE PROTEASE
Descriptor:3C-like proteinase
Authors:Chen, S., Hu, T., Jiang, H., Shen, X.
Deposit date:2007-05-14
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mutation of Gly-11 on the dimer interface results in the complete crystallographic dimer dissociation of severe acute respiratory syndrome coronavirus 3C-like protease: crystal structure with molecular dynamics simulations.
J.Biol.Chem., 283, 2008
4JBW
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CRYSTAL STRUCTURE OF E. COLI MALTOSE TRANSPORTER MALFGK2 IN COMPLEX WITH ITS REGULATORY PROTEIN EIIAGLC
Descriptor:Maltose transport system permease protein MalF, Maltose transport system permease protein MalG, Maltose/maltodextrin import ATP-binding protein MalK, ...
Authors:Chen, S., Oldham, M.L., Davidson, A.L., Chen, J.
Deposit date:2013-02-20
Release date:2013-06-12
Last modified:2013-07-17
Method:X-RAY DIFFRACTION (3.913 Å)
Cite:Carbon catabolite repression of the maltose transporter revealed by X-ray crystallography.
Nature, 499, 2013
1O3Q
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PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
Descriptor:5'-D(*AP*AP*AP*AP*AP*TP*GP*TP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*TP*TP*TP*T)-3', CATABOLITE GENE ACTIVATOR PROTEIN, ...
Authors:Chen, S., Vojtechovsky, J., Parkinson, G.N., Ebright, R.H., Berman, H.M.
Deposit date:2003-03-18
Release date:2003-04-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Indirect Readout of DNA Sequence at the Primary-kink Site in the CAP-DNA Complex: DNA Binding Specificity Based on Energetics of DNA Kinking
J.Mol.Biol., 314, 2001
1O3R
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PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
Descriptor:5'-D(*AP*AP*AP*AP*AP*TP*GP*CP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*GP*CP*AP*TP*TP*TP*TP*T)-3', CATABOLITE GENE ACTIVATOR PROTEIN, ...
Authors:Chen, S., Vojtechovsky, J., Parkinson, G.N., Ebright, R.H., Berman, H.M.
Deposit date:2003-03-18
Release date:2003-04-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Indirect Readout of DNA Sequence at the Primary-kink Site in the CAP-DNA Complex: DNA Binding Specificity Based on Energetics of DNA Kinking
J.Mol.Biol., 314, 2001
1O3S
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PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
Descriptor:5'-D(*AP*AP*AP*AP*AP*TP*GP*CP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*GP*CP*AP*TP*TP*TP*TP*T)-3', CATABOLITE GENE ACTIVATOR PROTEIN, ...
Authors:Chen, S., Ebright, R.H., Berman, H.M.
Deposit date:2003-03-18
Release date:2003-04-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Indirect Readout of DNA Sequence at the Primary-kink Site in the CAP-DNA Complex: Alteration of DNA Binding Specificity Through Alteration of DNA Kinking
J.Mol.Biol., 314, 2001
1O3T
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PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
Descriptor:5'-D(*GP*CP*GP*AP*AP*AP*AP*AP*TP*GP*CP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*GP*CP*AP*TP*TP*TP*TP*TP*CP*G)-3', CATABOLITE GENE ACTIVATOR PROTEIN, ...
Authors:Chen, S., Vojtechovsky, J., Parkinson, G.N., Ebright, R.H., Berman, H.M.
Deposit date:2003-03-18
Release date:2003-04-08
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Indirect Readout of DNA Sequence at the Primary-kink Site in the CAP-DNA Complex: DNA Binding Specificity Based on Energetics of DNA Kinking
J.Mol.Biol., 314, 2001
5DAG
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CRYSTAL STRUCTURE OF PZP DOMAIN OF HUMAN AF10 PROTEIN
Descriptor:Protein AF-10, ZINC ION
Authors:Chen, S., Patel, D.J.
Deposit date:2015-08-19
Release date:2015-10-21
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The PZP Domain of AF10 Senses Unmodified H3K27 to Regulate DOT1L-Mediated Methylation of H3K79.
Mol.Cell, 60, 2015
5DAH
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CRYSTAL STRUCTURE OF PZP DOMAIN OF HUMAN AF10 PROTEIN FUSED WITH HISTONE H3 PEPTIDE
Descriptor:Protein AF-10, Histone H3 peptide, ZINC ION, ...
Authors:Chen, S., Patel, D.J.
Deposit date:2015-08-19
Release date:2015-10-21
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.611 Å)
Cite:The PZP Domain of AF10 Senses Unmodified H3K27 to Regulate DOT1L-Mediated Methylation of H3K79.
Mol.Cell, 60, 2015
1N0E
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CRYSTAL STRUCTURE OF A CELL DIVISION AND CELL WALL BIOSYNTHESIS PROTEIN UPF0040 FROM MYCOPLASMA PNEUMONIAE: INDICATION OF A NOVEL FOLD WITH A POSSIBLE NEW CONSERVED SEQUENCE MOTIF
Descriptor:Protein mraZ
Authors:Chen, S., Jancrick, J., Yokota, H., Kim, R., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-10-13
Release date:2003-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a protein associated with cell division from Mycoplasma pneumoniae (GI: 13508053): a novel fold with a conserved sequence motif.
Proteins, 55, 2004
1N0F
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CRYSTAL STRUCTURE OF A CELL DIVISION AND CELL WALL BIOSYNTHESIS PROTEIN UPF0040 FROM MYCOPLASMA PNEUMONIAE: INDICATION OF A NOVEL FOLD WITH A POSSIBLE NEW CONSERVED SEQUENCE MOTIF
Descriptor:Protein mraZ
Authors:Chen, S., Jancrick, J., Yokota, H., Kim, R., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-10-13
Release date:2003-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a protein associated with cell division from Mycoplasma pneumoniae (GI: 13508053): a novel fold with a conserved sequence motif.
Proteins, 55, 2004
1N0G
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CRYSTAL STRUCTURE OF A CELL DIVISION AND CELL WALL BIOSYNTHESIS PROTEIN UPF0040 FROM MYCOPLASMA PNEUMONIAE: INDICATION OF A NOVEL FOLD WITH A POSSIBLE NEW CONSERVED SEQUENCE MOTIF
Descriptor:Protein mraZ
Authors:Chen, S., Jancarik, J., Yokota, H., Kim, R., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-10-13
Release date:2003-10-21
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a protein associated with cell division from Mycoplasma pneumoniae (GI: 13508053): a novel fold with a conserved sequence motif.
Proteins, 55, 2004
1S3L
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STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF A NOVEL ARCHAEAL PHOSPHODIESTERASE
Descriptor:Hypothetical protein MJ0936, UNKNOWN ATOM OR ION, PHOSPHATE ION
Authors:Chen, S., Busso, D., Yakunin, A.F., Kuznetsova, E., Proudfoot, M., Jancrick, J., Kim, R., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-13
Release date:2004-08-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and functional characterization of a novel phosphodiesterase from Methanococcus jannaschii
J.Biol.Chem., 279, 2004
1S3M
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STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF A NOVEL ARCHAEAL PHOSPHODIESTERASE
Descriptor:Hypothetical protein MJ0936, NICKEL (II) ION
Authors:Chen, S., Busso, D., Yakunin, A.F., Kuznetsova, E., Proudfoot, M., Jancrick, J., Kim, R., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-13
Release date:2004-08-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional characterization of a novel phosphodiesterase from Methanococcus jannaschii
J.Biol.Chem., 279, 2004
1S3N
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STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF A NOVEL ARCHAEAL PHOSPHODIESTERASE
Descriptor:Hypothetical protein MJ0936, MANGANESE (II) ION
Authors:Chen, S., Busso, D., Yakunin, A.F., Kuznetsova, E., Proudfoot, M., Jancrick, J., Kim, R., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-13
Release date:2004-08-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional characterization of a novel phosphodiesterase from Methanococcus jannaschii
J.Biol.Chem., 279, 2004
1SBQ
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CRYSTAL STRUCTURE OF METHENYLTETRAHYDROFOLATE SYNTHETASE FROM MYCOPLASMA PNEUMONIAE AT 2.2 RESOLUTION
Descriptor:5,10-Methenyltetrahydrofolate synthetase homolog, SULFATE ION
Authors:Chen, S., Shin, D.H., Pufan, R., Kim, R., Kim, S.H., Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-02-10
Release date:2004-08-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of methenyltetrahydrofolate synthetase from Mycoplasma pneumoniae (GI: 13508087) at 2.2 A resolution
Proteins, 56, 2004
1U3F
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STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF A 5,10-METHENYLTETRAHYDROFOLATE SYNTHETASE FROM MYCOPLASMA PNEUMONIAE (GI: 13508087)
Descriptor:5,10-Methenyltetrahydrofolate Synthetase, PHOSPHATE ION, MAGNESIUM ION, ...
Authors:Chen, S., Yakunin, A.F., Proudfoot, M., Kim, R., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-07-21
Release date:2004-12-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of methenyltetrahydrofolate synthetase from Mycoplasma pneumoniae (GI: 13508087) at 2.2 A resolution
Proteins, 56, 2004
1U3G
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STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF A 5,10-METHENYLTETRAHYDROFOLATE SYNTHETASE FROM MYCOPLASMA PNEUMONIAE (GI: 13508087)
Descriptor:5,10-Methenyltetrahydrofolate Synthetase, PHOSPHATE ION, MAGNESIUM ION, ...
Authors:Chen, S., Yakunin, A.F., Proudfoot, M., Kim, R., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-07-21
Release date:2004-12-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of methenyltetrahydrofolate synthetase from Mycoplasma pneumoniae (GI: 13508087) at 2.2 A resolution
Proteins, 56, 2004
2AHD
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THE APO STRUCTURE OF METHANOCOCCUS JANNASCHII PHOSPHODIESTERASE MJ0936
Descriptor:Phosphodiesterase MJ0936
Authors:Chen, S., Kim, R., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-07-27
Release date:2005-08-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Apo structure of Methanococcus jannaschii phosphodiesterase MJ0936
TO BE PUBLISHED
3O5Z
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CRYSTAL STRUCTURE OF THE SH3 DOMAIN FROM P85BETA SUBUNIT OF PHOSPHOINOSITIDE 3-KINASE (PI3K)
Descriptor:Phosphatidylinositol 3-kinase regulatory subunit beta, CHLORIDE ION, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Chen, S., Xiao, Y., Ponnusamy, R., Tan, J., Lei, J., Hilgenfeld, R.
Deposit date:2010-07-28
Release date:2011-08-10
Last modified:2014-09-10
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:X-ray structure of the SH3 domain of the phosphoinositide 3-kinase p85 beta subunit
Acta Crystallogr.,Sect.F, 67, 2011
3P31
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CRYSTAL STRUCTURE OF THE NS1 EFFECTOR DOMAIN FROM INFLUENZA A/VIETNAM/1203/2004 (H5N1) VIRUS
Descriptor:Nonstructural protein 1, THIOCYANATE ION
Authors:Chen, S., Xiao, Y.B., Ponnusamy, R., Hilgenfeld, R.
Deposit date:2010-10-04
Release date:2011-10-05
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:X-ray structures of the NS1 effector domain from highly pathogenic influenza A/Vietnam/1203/2004 (H5N1) virus
To be Published
3P38
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CRYSTAL STRUCTURE OF THE NS1 EFFECTOR DOMAIN W182A MUTANT FROM INFLUENZA A/VIETNAM/1203/2004 (H5N1) VIRUS
Descriptor:Nonstructural protein 1
Authors:Chen, S., Xiao, Y.B., Bricogne, G., Sharff, A.J., Hilgenfeld, R.
Deposit date:2010-10-04
Release date:2011-10-05
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:X-ray structures of the NS1 effector domain from highly pathogenic influenza A/Vietnam/1203/2004 (H5N1) virus
To be Published
3P39
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CRYSTAL STRUCTURE OF THE NS1 EFFECTOR DOMAIN W182A MUTANT FROM INFLUENZA A/VIETNAM/1203/2004 (H5N1) VIRUS
Descriptor:Nonstructural protein 1
Authors:Chen, S., Xiao, Y.B., Bricogne, G., Sharff, A.J., Hilgenfeld, R.
Deposit date:2010-10-04
Release date:2011-10-05
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:X-ray structures of the NS1 effector domain from highly pathogenic influenza A/Vietnam/1203/2004 (H5N1) virus
To be Published
3U9G
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CRYSTAL STRUCTURE OF THE ZINC FINGER ANTIVIRAL PROTEIN
Descriptor:Zinc finger CCCH-type antiviral protein 1, ZINC ION
Authors:Chen, S., Xu, Y., Zhang, K., Wang, X., Sun, J., Gao, G., Liu, Y.
Deposit date:2011-10-18
Release date:2012-03-14
Last modified:2013-07-17
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Structure of N-terminal domain of ZAP indicates how a zinc-finger protein recognizes complex RNA.
Nat.Struct.Mol.Biol., 19, 2012
4A0P
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CRYSTAL STRUCTURE OF LRP6P3E3P4E4
Descriptor:LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 6, N-ACETYL-D-GLUCOSAMINE, CALCIUM ION, ...
Authors:Chen, S., Malinauskas, T., Aricescu, A.R., Siebold, C., Jones, E.Y.
Deposit date:2011-09-11
Release date:2011-10-26
Last modified:2012-01-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Functional Studies of Lrp6 Ectodomain Reveal a Platform for Wnt Signaling.
Dev.Cell, 21, 2011
4MNV
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CRYSTAL STRUCTURE OF BICYCLIC PEPTIDE UK729 BOUND AS AN ACYL-ENZYME INTERMEDIATE TO UROKINASE-TYPE PLASMINOGEN ACTIVATOR (UPA)
Descriptor:Urokinase-type plasminogen activator chain B, acyl-enzyme intermediate of bicyclic peptide UK729, SULFATE ION, ...
Authors:Chen, S., Pojer, F., Heinis, C.
Deposit date:2013-09-11
Release date:2014-02-05
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Peptide ligands stabilized by small molecules.
Angew.Chem.Int.Ed.Engl., 53, 2014