Author results

2EHZ
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ANAEROBIC CRYSTAL STRUCTURE ANALYSIS OF 1,2-DIHYDROXYNAPHTHALENE DIOXYGENASE FROM PSEUDOMONAS SP. STRAIN C18 COMPLEXED WITH 4-METHYLCATECHOL
Descriptor:1,2-dihydroxynaphthalene dioxygenase, FE (II) ION, MAGNESIUM ION, ...
Authors:Neau, D.B., Kelker, M.S., Colbert, C.L., Bolin, J.T.
Deposit date:2007-03-10
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural explanation for success and failure in the enzymatic ring-cleavage of 3,4 dihydroxybiphenyl and related PCB metabolites
To be Published
1F8N
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LIPOXYGENASE-1 (SOYBEAN) AT 100K, NEW REFINEMENT
Descriptor:LIPOXYGENASE-1, FE (II) ION
Authors:Tomchick, D.R., Minor, W., Holman, T.
Deposit date:2000-06-30
Release date:2001-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and functional characterization of second-coordination sphere mutants of soybean lipoxygenase-1.
Biochemistry, 40, 2001
1YGE
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LIPOXYGENASE-1 (SOYBEAN) AT 100K
Descriptor:LIPOXYGENASE-1, FE (III) ION
Authors:Minor, W., Steczko, J., Stec, B., Otwinowski, Z., Bolin, J.T., Walter, R., Axelrod, B.
Deposit date:1996-06-04
Release date:1997-07-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of soybean lipoxygenase L-1 at 1.4 A resolution.
Biochemistry, 35, 1996
3PZW
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SOYBEAN LIPOXYGENASE-1 - RE-REFINEMENT
Descriptor:Seed lipoxygenase-1, FE (II) ION, 1,2-ETHANEDIOL, ...
Authors:Chruszcz, M., Minor, W.
Deposit date:2010-12-14
Release date:2011-01-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Determination of protein structures - a series of fortunate events.
Biophys.J., 95, 2008
2EI1
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ANAEROBIC CRYSTAL STRUCUTRE ANALYSIS OF THE 1,2-DIHYDROXYNAPHTHALENE DIOXYGEANSE OF PSEUDOMONAS SP. STRAIN C18 COMPLEXES TO 1,2-DIHYDROXYNAPHTHALENE
Descriptor:1,2-dihydroxynaphthalene dioxygenase, FE (II) ION, MAGNESIUM ION, ...
Authors:Neau, D.B., Kelker, M.S., Colbert, C.L., Bolin, J.T.
Deposit date:2007-03-10
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structural explanation for success and failure in the enzymatic ring-cleavage of 3,4 dihydroxybiphenyl and related PCB metabolites.
To be Published
2PUJ
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CRYSTAL STRUCTURE OF THE S112A/H265A DOUBLE MUTANT OF A C-C HYDROLASE, BPHD FROM BURKHOLDERIA XENOVORANS LB400, IN COMPLEX WITH ITS SUBSTRATE HOPDA
Descriptor:2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, SODIUM ION, MALONATE ION, ...
Authors:Bhowmik, S., Bolin, J.T.
Deposit date:2007-05-09
Release date:2007-05-22
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:The Tautomeric Half-reaction of BphD, a C-C Bond Hydrolase: KINETIC AND STRUCTURAL EVIDENCE SUPPORTING A KEY ROLE FOR HISTIDINE 265 OF THE CATALYTIC TRIAD.
J.Biol.Chem., 282, 2007
2RHW
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CRYSTAL STRUCTURE OF THE S112A MUTANT OF A C-C HYDROLASE, BPHD FROM BURKHOLDERIA XENOVORANS LB400, IN COMPLEX WITH 3,10-DI-FLUORO HOPDA
Descriptor:2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, SODIUM ION, MALONATE ION, ...
Authors:Bhowmik, S., Bolin, J.T.
Deposit date:2007-10-09
Release date:2007-11-13
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:The Molecular Basis for Inhibition of BphD, a C-C Bond Hydrolase Involved in Polychlorinated Biphenyls Degradation: LARGE 3-SUBSTITUENTS PREVENT TAUTOMERIZATION.
J.Biol.Chem., 282, 2007
3GZX
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CRYSTAL STRUCTURE OF THE BIPHENYL DIOXYGENASE IN COMPLEX WITH BIPHENYL FROM COMAMONAS TESTOSTERONI SP. STRAIN B-356
Descriptor:Biphenyl dioxygenase subunit alpha, Biphenyl dioxygenase subunit beta, FE (II) ION, ...
Authors:Kumar, P., Colbert, C.L., Bolin, J.T.
Deposit date:2009-04-08
Release date:2010-05-05
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural Characterization of Pandoraea pnomenusa B-356 Biphenyl Dioxygenase Reveals Features of Potent Polychlorinated Biphenyl-Degrading Enzymes
Plos One, 8, 2013
3V1N
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CRYSTAL STRUCTURE OF THE H265Q MUTANT OF A C-C HYDROLASE, BPHD FROM BURKHOLDERIA XENOVORANS LB400, AFTER EXPOSURE TO ITS SUBSTRATE HOPDA
Descriptor:2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, MALONIC ACID, BENZOIC ACID, ...
Authors:Ghosh, S., Bolin, J.T.
Deposit date:2011-12-09
Release date:2012-03-21
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Identification of an Acyl-Enzyme Intermediate in a meta-Cleavage Product Hydrolase Reveals the Versatility of the Catalytic Triad.
J.Am.Chem.Soc., 134, 2012
1FGR
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LIPOXYGENASE-1 (SOYBEAN) AT 100K, Q697E MUTANT
Descriptor:SEED LIPOXYGENASE-1, FE (III) ION
Authors:Tomchick, D.R., Minor, W., Holman, T.
Deposit date:2000-07-28
Release date:2001-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional characterization of second-coordination sphere mutants of soybean lipoxygenase-1.
Biochemistry, 40, 2001
1FQT
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CRYSTAL STRUCTURE OF THE RIESKE-TYPE FERREDOXIN ASSOCIATED WITH BIPHENYL DIOXYGENASE
Descriptor:RIESKE-TYPE FERREDOXIN OF BIPHENYL DIOXYGENASE, FE2/S2 (INORGANIC) CLUSTER, GLYCEROL
Authors:Colbert, C.L., Couture, M.M.-J., Eltis, L.D., Bolin, J.T.
Deposit date:2000-09-06
Release date:2001-01-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A cluster exposed: structure of the Rieske ferredoxin from biphenyl dioxygenase and the redox properties of Rieske Fe-S proteins.
Structure Fold.Des., 8, 2000
2EI0
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ANAEROBIC CRYSTAL STRUCTURE ANALYSIS OF 1,2-DIHYDROXYNAPHTHALENE DIOXYGENASE FROM PSEUDOMONAS SP. STRAIN C18 COMPLEXED WITH 3,4-DIHYDROXYBIPHENYL
Descriptor:1,2-dihydroxynaphthalene dioxygenase, FE (II) ION, MAGNESIUM ION, ...
Authors:Neau, D.B., Kelker, M.S., Colbert, C.L., Bolin, J.T.
Deposit date:2007-03-10
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural explanation for success and failure in the enzymatic ring-cleavage of 3,4 dihydroxybiphenyl and related PCB metabolites
To be Published
2OG1
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CRYSTAL STRUCTURE OF BPHD, A C-C HYDROLASE FROM BURKHOLDERIA XENOVORANS LB400
Descriptor:2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, SULFATE ION, GLYCEROL, ...
Authors:Dai, S., Ke, J., Bolin, J.T.
Deposit date:2007-01-04
Release date:2007-01-16
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Kinetic and structural insight into the mechanism of BphD, a C-C bond hydrolase from the biphenyl degradation pathway
Biochemistry, 45, 2006
1FGO
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LIPOXYGENASE-1 (SOYBEAN) AT 100K, Q495A MUTANT
Descriptor:SEED LIPOXYGENASE-1, FE (III) ION
Authors:Tomchick, D.R., Minor, W., Holman, T.
Deposit date:2000-07-28
Release date:2001-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural and functional characterization of second-coordination sphere mutants of soybean lipoxygenase-1.
Biochemistry, 40, 2001
1FGT
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LIPOXYGENASE-1 (SOYBEAN) AT 100K, Q697N MUTANT
Descriptor:SEED LIPOXYGENASE-1, FE (III) ION
Authors:Tomchick, D.R., Minor, W., Holman, T.
Deposit date:2000-07-28
Release date:2001-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural and functional characterization of second-coordination sphere mutants of soybean lipoxygenase-1.
Biochemistry, 40, 2001
3GZY
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CRYSTAL STRUCTURE OF THE BIPHENYL DIOXYGENASE FROM COMAMONAS TESTOSTERONI SP. STRAIN B-356
Descriptor:Biphenyl dioxygenase subunit alpha, Biphenyl dioxygenase subunit beta, FE (II) ION, ...
Authors:Kumar, P., Colbert, C.L., Bolin, J.T.
Deposit date:2009-04-08
Release date:2010-05-05
Last modified:2013-02-06
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural Characterization of Pandoraea pnomenusa B-356 Biphenyl Dioxygenase Reveals Features of Potent Polychlorinated Biphenyl-Degrading Enzymes
Plos One, 8, 2013
2RI6
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CRYSTAL STRUCTURE OF S112A MUTANT OF A C-C HYDROLASE, BPHD FROM BURKHOLDERIA XENOVORANS LB400
Descriptor:2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, SODIUM ION, MALONATE ION
Authors:Bhowmik, S., Bolin, J.T.
Deposit date:2007-10-10
Release date:2007-11-06
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:The tautomeric half-reaction of BphD, a C-C bond hydrolase. Kinetic and structural evidence supporting a key role for histidine 265 of the catalytic triad.
J.Biol.Chem., 282, 2007
2EI2
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CRYSTAL STRUCTURE ANALYSIS OF THE 1,2-DIHYDROXYNAPHTHALENE DIOXYGENASE FROM PSEUDOMONAS SP. STAIN C18
Descriptor:1,2-dihydroxynaphthalene dioxygenase, MAGNESIUM ION, FE (II) ION, ...
Authors:Neau, D.B., Kelker, M.S., Colbert, C.L., Bolin, J.T.
Deposit date:2007-03-10
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural explanation for success and failure in the enzymatic ring-cleavage of 3,4 dihydroxybiphenyl and related PCB metabolites
To be Published
1LGT
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CRYSTAL STRUCTURE OF 2,3-DIHYDROXYBIPHENYL 1,2-DIOXYGENASE (DHBD) COMPLEXED WITH 2'-CL DIHYDROXYBIPHENYL (DHB)
Descriptor:BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE, FE (II) ION, 2'-CHLORO-BIPHENYL-2,3-DIOL
Authors:Dai, S., Bolin, J.T.
Deposit date:2002-04-16
Release date:2002-11-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification and analysis of a bottleneck in PCB biodegradation
Nat.Struct.Biol., 12, 2002
1LKD
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CRYSTAL STRUCTURE OF 2,3-DIHYDROXYBIPHENYL 1,2-DIOXYGENASE (DHBD) COMPLEXED WITH 2',6'-DICL DIHYDROXYBIPHENYL (DHB)
Descriptor:BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE, FE (II) ION, 2',6'-DICHLORO-BIPHENYL-2,6-DIOL, ...
Authors:Dai, S., Bolin, J.T.
Deposit date:2002-04-24
Release date:2002-11-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification and analysis of a bottleneck in PCB biodegradation
Nat.Struct.Biol., 9, 2002
2RHT
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CRYSTAL STRUCTURE OF THE S112A MUTANT OF A C-C HYDROLASE, BPHD FROM BURKHOLDERIA XENOVORANS LB400, IN COMPLEX WITH 3-CL HOPDA
Descriptor:2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, SODIUM ION, (2Z,4E)-3-chloro-2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid, ...
Authors:Bhowmik, S., Bolin, J.T.
Deposit date:2007-10-09
Release date:2007-11-13
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Molecular Basis for Inhibition of BphD, a C-C Bond Hydrolase Involved in Polychlorinated Biphenyls Degradation: LARGE 3-SUBSTITUENTS PREVENT TAUTOMERIZATION.
J.Biol.Chem., 282, 2007
3DFR
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CRYSTAL STRUCTURES OF ESCHERICHIA COLI AND LACTOBACILLUS CASEI DIHYDROFOLATE REDUCTASE REFINED AT 1.7 ANGSTROMS RESOLUTION. I. GENERAL FEATURES AND BINDING OF METHOTREXATE
Descriptor:DIHYDROFOLATE REDUCTASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, METHOTREXATE
Authors:Filman, D.J., Matthews, D.A., Bolin, J.T., Kraut, J.
Deposit date:1982-06-25
Release date:1982-10-21
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of Escherichia coli and Lactobacillus casei dihydrofolate reductase refined at 1.7 A resolution. I. General features and binding of methotrexate.
J.Biol.Chem., 257, 1982
4DFR
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CRYSTAL STRUCTURES OF ESCHERICHIA COLI AND LACTOBACILLUS CASEI DIHYDROFOLATE REDUCTASE REFINED AT 1.7 ANGSTROMS RESOLUTION. I. GENERAL FEATURES AND BINDING OF METHOTREXATE
Descriptor:DIHYDROFOLATE REDUCTASE, CHLORIDE ION, METHOTREXATE, ...
Authors:Filman, D.J., Matthews, D.A., Bolin, J.T., Kraut, J.
Deposit date:1982-06-25
Release date:1982-10-21
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of Escherichia coli and Lactobacillus casei dihydrofolate reductase refined at 1.7 A resolution. I. General features and binding of methotrexate.
J.Biol.Chem., 257, 1982
8DFR
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REFINED CRYSTAL STRUCTURES OF CHICKEN LIVER DIHYDROFOLATE REDUCTASE. 3 ANGSTROMS APO-ENZYME AND 1.7 ANGSTROMS NADPH HOLO-ENZYME COMPLEX
Descriptor:DIHYDROFOLATE REDUCTASE, CALCIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Matthews, D.A., Oatley, S.J., Burridge, J., Kaufman, B.T., Xuong, N.-H., Kraut, J.
Deposit date:1989-05-30
Release date:1989-10-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Refined Crystal Structures of Chicken Liver Dihydrofolate Reductase. 3 Angstroms Apo-Enzyme and 1.7 Angstroms Nadph Holo-Enzyme Complex
To be Published
1DHJ
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LONG-RANGE STRUCTURAL EFFECTS IN A SECOND-SITE REVERTANT OF A MUTANT DIHYDROFOLATE REDUCTASE
Descriptor:DIHYDROFOLATE REDUCTASE, CHLORIDE ION, METHOTREXATE, ...
Authors:Brown, K.A., Kraut, J.
Deposit date:1993-10-29
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Long-range structural effects in a second-site revertant of a mutant dihydrofolate reductase.
Proc.Natl.Acad.Sci.USA, 90, 1993