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6IY7
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BU of 6iy7 by Molmil
E. coli peptide deformylase crystal structure fitted into the cryo-EM density map of E. coli 70S ribosome in complex with peptide deformylase
Descriptor: Peptide deformylase
Authors:Sengupta, J, Akbar, S, Bhakta, S.
Deposit date:2018-12-13
Release date:2019-04-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (10.5 Å)
Cite:Cryo-EM Structures Reveal Relocalization of MetAP in the Presence of Other Protein Biogenesis Factors at the Ribosomal Tunnel Exit.
J. Mol. Biol., 431, 2019
6J45
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BU of 6j45 by Molmil
Crystal structure of E. coli peptide deformylase enzyme and chaperone trigger factor fitted into the cryo-EM density map of the complex
Descriptor: Peptide deformylase, Trigger factor
Authors:Sengupta, J, Bhakta, S, Akbar, S.
Deposit date:2019-01-07
Release date:2019-04-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (12.2 Å)
Cite:Cryo-EM Structures Reveal Relocalization of MetAP in the Presence of Other Protein Biogenesis Factors at the Ribosomal Tunnel Exit.
J. Mol. Biol., 431, 2019
6IZ7
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BU of 6iz7 by Molmil
E. coli methionine aminopeptidase crystal structure fitted into the cryo-EM density map of E. coli 70S ribosome in complex with methionine aminopeptidase
Descriptor: Methionine aminopeptidase
Authors:Sengupta, J, Bhakta, S, Akbar, S.
Deposit date:2018-12-18
Release date:2019-04-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (11.8 Å)
Cite:Cryo-EM Structures Reveal Relocalization of MetAP in the Presence of Other Protein Biogenesis Factors at the Ribosomal Tunnel Exit.
J. Mol. Biol., 431, 2019
6IZI
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BU of 6izi by Molmil
Crystal structure of E. coli peptide deformylase and methionine aminopeptidase fitted into the cryo-EM density map of the complex
Descriptor: Methionine aminopeptidase, Peptide deformylase
Authors:Sengupta, J, Bhakta, S, Akbar, S.
Deposit date:2018-12-19
Release date:2019-04-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (11.8 Å)
Cite:Cryo-EM Structures Reveal Relocalization of MetAP in the Presence of Other Protein Biogenesis Factors at the Ribosomal Tunnel Exit.
J. Mol. Biol., 431, 2019
6J0A
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BU of 6j0a by Molmil
Crystal structure of E. coli methionine aminopeptidase enzyme and chaperone trigger factor fitted into the cryo-EM density map of the complex
Descriptor: Methionine aminopeptidase, Trigger factor
Authors:Sengupta, J, Bhakta, S, Akbar, S.
Deposit date:2018-12-22
Release date:2019-04-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (14.2 Å)
Cite:Cryo-EM Structures Reveal Relocalization of MetAP in the Presence of Other Protein Biogenesis Factors at the Ribosomal Tunnel Exit.
J. Mol. Biol., 431, 2019
4WJT
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BU of 4wjt by Molmil
Stationary Phase Survival Protein YuiC from B.subtilis complexed with NAG
Descriptor: (2S)-2-{[(2S)-2-{[(2R)-2-hydroxypropyl]oxy}propyl]oxy}propan-1-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:Quay, D.H.X, Cole, A.R, Cryar, A, Thalassinos, K, Williams, M.A, Bhakta, S, Keep, N.H.
Deposit date:2014-10-01
Release date:2015-07-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Structure of the stationary phase survival protein YuiC from B.subtilis.
Bmc Struct.Biol., 15, 2015
4WLK
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BU of 4wlk by Molmil
Stationary Phase Survival Protein YuiC from B.subtilis complexed with reaction product
Descriptor: N-[(1R,2S,3R,4R,5R)-2-[(2S,3R,4R,5S,6R)-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-3-oxidanyl-6,8-dioxabicyclo[3.2.1]octan-4-yl]ethanamide, YuiC
Authors:Quay, D.H.X, Cole, A.R, Cryar, A, Thalassinos, K, Williams, M.A, Bhakta, S, Keep, N.H.
Deposit date:2014-10-07
Release date:2015-07-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structure of the stationary phase survival protein YuiC from B.subtilis.
Bmc Struct.Biol., 15, 2015
4WLI
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BU of 4wli by Molmil
Stationary Phase Survival Protein YuiC from B.subtilis
Descriptor: 1,2-ETHANEDIOL, YuiC
Authors:Quay, D.H.X, Cole, A.R, Cryar, A, Thalassinos, K, Williams, M.A, Bhakta, S, Keep, N.H.
Deposit date:2014-10-07
Release date:2015-07-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure of the stationary phase survival protein YuiC from B.subtilis.
Bmc Struct.Biol., 15, 2015
4B55
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BU of 4b55 by Molmil
Crystal Structure of the Covalent Adduct Formed between Mycobacterium marinum Aryalamine N-acetyltransferase and Phenyl vinyl ketone a derivative of Piperidinols
Descriptor: 3-hydroxy-1-phenylpropan-1-one, ARYLAMINE N-ACETYLTRANSFERASE NAT
Authors:Abuhammad, A, Fullam, E, Lowe, E.D, Staunton, D, Kawamura, A, Westwood, I.M, Bhakta, S, Garner, A.C, Wilson, D.L, Seden, P.T, Davies, S.G, Russell, A.J, Garman, E.F, Sim, E.
Deposit date:2012-08-02
Release date:2013-01-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Piperidinols that Show Anti-Tubercular Activity as Inhibitors of Arylamine N-Acetyltransferase: An Essential Enzyme for Mycobacterial Survival Inside Macrophages.
Plos One, 7, 2012
5JZS
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BU of 5jzs by Molmil
HsaD bound to 3,5-dichloro-4-hydroxybenzoic acid
Descriptor: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase BphD, 3,5-dichloro-4-hydroxybenzoic acid
Authors:Ryan, A, Polycarpou, E, Lack, N, Evangelopoulos, D, Sieg, C, Halman, A, Bhakta, S, Sinclair, A, Eleftheriadou, O, McHugh, T.D, Keany, S, Lowe, E.D, Ballet, R, Abuhammad, A, Ciulli, A, Sim, E.
Deposit date:2016-05-17
Release date:2017-04-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Investigation of the mycobacterial enzyme HsaD as a potential novel target for anti-tubercular agents using a fragment-based drug design approach.
Br. J. Pharmacol., 174, 2017
5JZB
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BU of 5jzb by Molmil
Crystal structure of HsaD bound to 3,5-dichlorobenzene sulphonamide
Descriptor: 3,5-dichlorobenzene-1-sulfonamide, 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase, PHOSPHATE ION
Authors:Ryan, A, Polycarpou, E, Lack, N.A, Evangelopoulos, D, Sieg, C, Halman, A, Bhakta, S, Sinclair, A, Eleftheriadou, O, McHugh, T.D, Keany, S, Lowe, E, Ballet, R, Abihammad, A, Ciulli, A, Sim, E.
Deposit date:2016-05-16
Release date:2017-04-05
Last modified:2017-07-05
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Investigation of the mycobacterial enzyme HsaD as a potential novel target for anti-tubercular agents using a fragment-based drug design approach.
Br. J. Pharmacol., 174, 2017
7D80
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BU of 7d80 by Molmil
Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Akbar, S, Bhakta, S, Sengupta, J.
Deposit date:2020-10-06
Release date:2021-04-07
Last modified:2021-07-14
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural insights into the interplay of protein biogenesis factors with the 70S ribosome.
Structure, 29, 2021
7D6Z
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BU of 7d6z by Molmil
Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor
Descriptor: 16S ribosomal rRNA, 23S ribosomal rRNA, 30S ribosomal protein S10, ...
Authors:Akbar, S, Bhakta, S, Sengupta, J.
Deposit date:2020-10-02
Release date:2021-04-07
Last modified:2021-07-14
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into the interplay of protein biogenesis factors with the 70S ribosome.
Structure, 29, 2021
5JZ9
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BU of 5jz9 by Molmil
Crystal structure of HsaD bound to 3,5-dichloro-4-hydroxybenzenesulphonic acid
Descriptor: 3,5-dichloro-4-hydroxybenzene-1-sulfonic acid, 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase
Authors:Ryan, A, Polycarpou, E, Lack, N.A, Evangelopoulos, D, Sieg, C, Halman, A, Bhakta, S, Sinclair, A, Eleftheriadou, O, McHugh, T.D, Keany, S, Lowe, E, Ballet, R, Abihammad, A, Ciulli, A, Sim, E.
Deposit date:2016-05-16
Release date:2017-04-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Investigation of the mycobacterial enzyme HsaD as a potential novel target for anti-tubercular agents using a fragment-based drug design approach.
Br. J. Pharmacol., 174, 2017
2XJA
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BU of 2xja by Molmil
Structure of MurE from M.tuberculosis with dipeptide and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE, ...
Authors:Basavannacharya, C, Moody, P.R, Bhakta, S, Keep, N.
Deposit date:2010-07-03
Release date:2010-08-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Essential Residues for the Enzyme Activity of ATP-Dependent Mure Ligase from Mycobacterium Tuberculosis.
Protein Cell, 1, 2010
1W4T
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BU of 1w4t by Molmil
X-ray crystallographic structure of Pseudomonas aeruginosa arylamine N-acetyltransferase
Descriptor: Arylamine N-acetyltransferase, SULFATE ION
Authors:Westwood, I.M, Holton, S.J, Rodrigues-Lima, F, Dupret, J.-M, Bhakta, S, Noble, M.E, Sim, E.
Deposit date:2004-07-29
Release date:2005-08-03
Last modified:2018-12-05
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Expression, purification, characterization and structure of Pseudomonas aeruginosa arylamine N-acetyltransferase.
Biochem. J., 385, 2005
2WTZ
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BU of 2wtz by Molmil
MurE ligase of Mycobacterium Tuberculosis
Descriptor: MAGNESIUM ION, UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE, URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE-D-GLUTAMATE
Authors:Basavannacharya, C, Robertson, G, Munshi, T, Keep, N.H, Bhakta, S.
Deposit date:2009-09-25
Release date:2009-12-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:ATP-Dependent Mure Ligase in Mycobacterium Tuberculosis: Biochemical and Structural Characterisation.
Tuberculosis(Edinb.), 90, 2010
2XW7
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BU of 2xw7 by Molmil
Structure of Mycobacterium smegmatis putative reductase MS0308
Descriptor: DIHYDROFOLATE REDUCTASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SODIUM ION, ...
Authors:Evangelopoulos, D, Gupta, A, Lack, N, Cronin, N, Daviter, T, Sim, E, Keep, N.H, Bhakta, S.
Deposit date:2010-11-01
Release date:2010-12-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characterization of an Oxidoreductase from the Arylamine N-Acetyltransferase Operon in Mycobacterium Smegmatis.
FEBS J., 278, 2011
6JR3
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BU of 6jr3 by Molmil
Crystal structure of insulin hexamer fitted into cryo EM density map where each dimer was kept as rigid body
Descriptor: Insulin A chain, Insulin B chain
Authors:Sengupta, J, Pathak, B.K, Bhakta, S.
Deposit date:2019-04-02
Release date:2020-04-22
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (14.5 Å)
Cite:Resveratrol as a nontoxic excipient stabilizes insulin in a bioactive hexameric form.
J.Comput.Aided Mol.Des., 34, 2020
6AUM
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BU of 6aum by Molmil
Crystal structure of human soluble epoxide hydrolase complexed with trans-4-[4-(3-trifluoromethoxyphenyl-l-ureido)-cyclohexyloxy]-benzoic acid.
Descriptor: 4-{[trans-4-({[4-(trifluoromethoxy)phenyl]carbamoyl}amino)cyclohexyl]oxy}benzoic acid, Bifunctional epoxide hydrolase 2, CHLORIDE ION, ...
Authors:Kodani, S.D, Bahkta, S, Hwang, S.H, Pakhomova, S, Newcomer, M.E, Morisseau, C, Hammock, B.
Deposit date:2017-09-01
Release date:2018-02-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Identification and optimization of soluble epoxide hydrolase inhibitors with dual potency towards fatty acid amide hydrolase.
Bioorg. Med. Chem. Lett., 28, 2018
1W5R
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BU of 1w5r by Molmil
X-ray crystallographic structure of a C70Q Mycobacterium smegmatis N- arylamine Acetyltransferase
Descriptor: ARYLAMINE N-ACETYLTRANSFERASE
Authors:Holton, S.J, Sandy, J, Rodrigues-Lima, F, Dupret, J.-M, Bhakta, S, Noble, M.E.M, Sim, E.
Deposit date:2004-08-09
Release date:2005-05-11
Last modified:2020-11-18
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Investigation of the Catalytic Triad of Arylamine N-Acetyltransferases: Essential Residues Required for Acetyl Transfer to Arylamines.
Biochem.J., 390, 2005

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