Author results

1SP7
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STRUCTURE OF THE CYS-RICH C-TERMINAL DOMAIN OF HYDRA MINICOLLAGEN
Descriptor:mini-collagen
Authors:Meier, S., Haussinger, D., Pokidysheva, E., Bachinger, H.P., Grzesiek, S.
Deposit date:2004-03-16
Release date:2004-05-18
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Determination of a high-precision NMR structure of the minicollagen cysteine rich domain from Hydra and characterization of its disulfide bond formation.
Febs Lett., 569, 2004
1G4Y
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1.60 A CRYSTAL STRUCTURE OF THE GATING DOMAIN FROM SMALL CONDUCTANCE POTASSIUM CHANNEL COMPLEXED WITH CALCIUM-CALMODULIN
Descriptor:CALCIUM-ACTIVATED POTASSIUM CHANNEL RSK2, CALMODULIN, SULFATE ION, ...
Authors:Schumacher, M.A., Rivard, A., Bachinger, H.P., Adelman, J.P.
Deposit date:2001-01-07
Release date:2001-05-09
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the gating domain of a Ca2+-activated K+ channel complexed with Ca2+/calmodulin.
Nature, 410, 2001
1YM8
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CRYSTAL STRUCTURE OF GZZ SHOWS UP PUCKERING OF THE PROLINE RING IN THE XAA POSITION.
Descriptor:collagen gly-4(R)hyp-4(R)hyp
Authors:Schumacher, M.A., Mizuno, K., Bachinger, H.P.
Deposit date:2005-01-20
Release date:2005-04-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The crystal structure of the collagen-like polypeptide (glycyl-4(R)-hydroxyprolyl-4(R)-hydroxyprolyl)9 at 1.55 A resolution shows up-puckering of the proline ring in the Xaa position.
J.Biol.Chem., 280, 2005
2D3H
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CRYSTAL STRUCTURES OF COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-HYP-HYP-GLY-(PRO-PRO-GLY)4
Descriptor:COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-HYP-HYP-GLY-(PRO-PRO-GLY)4
Authors:Wu, G., Noguchi, K., Okuyama, K., Mizuno, K., Bachinger, H.P.
Deposit date:2005-09-28
Release date:2006-09-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:High-resolution structures of collagen-like peptides [(Pro-Pro-Gly)(4)-Xaa-Yaa-Gly-(Pro-Pro-Gly)(4)]: Implications for triple-helix hydration and Hyp(X) puckering.
Biopolymers, 91, 2009
2G66
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CRYSTAL STRUCTURE OF A COLLAGEN-LIKE PEPTIDE WITH 3(S)HYP IN THE XAA POSITION
Descriptor:collagen
Authors:Schumacher, M.A., Mizuno, K., Bachinger, H.P.
Deposit date:2006-02-24
Release date:2006-08-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Crystal Structure of a Collagen-like Polypeptide with 3(S)-Hydroxyproline Residues in the Xaa Position Forms a Standard 7/2 Collagen Triple Helix
J.Biol.Chem., 281, 2006
2NX6
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STRUCTURE OF NOWA CYSTEINE RICH DOMAIN 6
Descriptor:Nematocyst outer wall antigen
Authors:Meier, S., Jensen, P.R., Adamczyk, P., Bachinger, H.P., Holstein, T.W., Engel, J., Ozbek, S., Grzesiek, S.
Deposit date:2006-11-17
Release date:2007-10-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Sequence-structure and structure-function analysis in cysteine-rich domains forming the ultrastable nematocyst wall.
J.Mol.Biol., 368, 2007
2NX7
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STRUCTURE OF NOWA CYSTEINE RICH DOMAIN 8
Descriptor:Nematocyst outer wall antigen
Authors:Meier, S., Jensen, P.R., Adamczyk, P., Bachinger, H.P., Holstein, T.W., Engel, J., Ozbek, S., Grzesiek, S.
Deposit date:2006-11-17
Release date:2007-10-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Sequence-structure and structure-function analysis in cysteine-rich domains forming the ultrastable nematocyst wall.
J.Mol.Biol., 368, 2007
2V53
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CRYSTAL STRUCTURE OF A SPARC-COLLAGEN COMPLEX
Descriptor:SPARC, COLLAGEN ALPHA-1(III) CHAIN, CALCIUM ION, ...
Authors:Hohenester, E., Sasaki, T., Giudici, C., Farndale, R.W., Bachinger, H.P.
Deposit date:2008-10-01
Release date:2008-11-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Basis of Sequence-Specific Collagen Recognition by Sparc.
Proc.Natl.Acad.Sci.USA, 105, 2008
3A08
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STRUCTURE OF (PPG)4-OOG-(PPG)4, MONOCLINIC, TWINNED CRYSTAL
Descriptor:collagen-like peptide
Authors:Okuyama, K., Morimoto, T., Wu, G., Noguchi, K., Mizuno, K., Bachinger, H.P.
Deposit date:2009-03-06
Release date:2010-01-12
Last modified:2014-09-17
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Two crystal modifications of (Pro-Pro-Gly)4-Hyp-Hyp-Gly-(Pro-Pro-Gly)4 reveal the puckering preference of Hyp(X) in the Hyp(X):Hyp(Y) and Hyp(X):Pro(Y) stacking pairs in collagen helices.
Acta Crystallogr.,Sect.D, 66, 2010
3A0M
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STRUCTURE OF (PPG)4-OVG-(PPG)4, MONOCLINIC, TWINNED CRYSTAL
Descriptor:collagen-like peptide
Authors:Okuyama, K., Morimoto, T., Mizuno, K., Bachinger, H.P.
Deposit date:2009-03-21
Release date:2010-03-02
Last modified:2012-06-06
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Stabilization of triple-helical structures of collagen peptides containing a Hyp-Thr-Gly, Hyp-Val-Gly, or Hyp-Ser-Gly sequence.
Biopolymers, 95, 2011
3A19
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STRUCTURE OF (PPG)4-OOG-(PPG)4_H MONOCLINIC, TWINNED CRYSTAL
Descriptor:collagen-like peptide
Authors:Okuyama, K., Morimoto, T., Hyakutake, M., Wu, G., Mizuno, K., Bachinger, H.P.
Deposit date:2009-03-28
Release date:2010-01-12
Last modified:2014-09-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Two crystal modifications of (Pro-Pro-Gly)4-Hyp-Hyp-Gly-(Pro-Pro-Gly)4 reveal the puckering preference of Hyp(X) in the Hyp(X):Hyp(Y) and Hyp(X):Pro(Y) stacking pairs in collagen helices.
Acta Crystallogr.,Sect.D, 66, 2010
3A1H
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CRYSTAL STRUCTURE ANALYSIS OF THE COLLAGEN-LIKE PEPTIDE, (PPG)4-OTG-(PPG)4
Descriptor:collagen-like peptide
Authors:Okuyama, K., Miyama, K., Mizuno, K., Bachinger, H.P.
Deposit date:2009-04-03
Release date:2010-03-23
Last modified:2011-07-27
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Stabilization of triple-helical structures of collagen peptides containing a Hyp-Thr-Gly, Hyp-Val-Gly, or Hyp-Ser-Gly sequence.
Biopolymers, 95, 2011
3ABN
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CRYSTAL STRUCTURE OF (PRO-PRO-GLY)4-HYP-ASP-GLY-(PRO-PRO-GLY)4 AT 1.02 A
Descriptor:collagen-like peptide
Authors:Okuyama, K., Shimura, M., Kawaguchi, T., Noguchi, K., Mizuno, K., Bachinger, H.P.
Deposit date:2009-12-16
Release date:2010-12-01
Last modified:2013-11-27
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Crystal structure of the collagen model peptide (Pro-Pro-Gly)4 -Hyp-Asp-Gly-(Pro-Pro-Gly)4 at 1.0 angstrom resolution.
Biopolymers, 99, 2013
3ADM
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CRYSTAL STRUCTURE OF (PRO-PRO-GLY)4-HYP-SER-GLY-(PRO-PRO-GLY)4
Descriptor:collagen-like peptide
Authors:Okuyama, K., Miyama, K., Masakiyo, K., Mizuno, K., Bachinger, H.P.
Deposit date:2010-01-22
Release date:2011-01-19
Last modified:2011-07-27
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Stabilization of triple-helical structures of collagen peptides containing a Hyp-Thr-Gly, Hyp-Val-Gly, or Hyp-Ser-Gly sequence.
Biopolymers, 95, 2011
3B0S
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CRYSTAL STRUCTURE OF (GLY-PRO-HYP)9
Descriptor:collagen-like peptide
Authors:Okuyama, K., Miyama, K., Mizuno, K., Bachinger, H.P.
Deposit date:2011-06-14
Release date:2012-05-30
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of (Gly-Pro-Hyp)(9) : Implications for the collagen molecular model.
Biopolymers, 97, 2012
3DMW
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CRYSTAL STRUCTURE OF HUMAN TYPE III COLLAGEN G982-G1023 CONTAINING C-TERMINAL CYSTINE KNOT
Descriptor:Collagen alpha-1(III) chain
Authors:Boudko, S.P., Engel, J., Okuyama, K., Mizuno, K., Bachinger, H.P., Schumacher, M.A.
Deposit date:2008-07-01
Release date:2008-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human type III collagen Gly991-Gly1032 cystine knot-containing peptide shows both 7/2 and 10/3 triple helical symmetries.
J.Biol.Chem., 283, 2008
3HON
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CRYSTAL STRUCTURE OF HUMAN COLLAGEN XVIII TRIMERIZATION DOMAIN (CUBIC FORM)
Descriptor:Collagen alpha-1(XVIII) chain
Authors:Boudko, S.P., Bachinger, H.P.
Deposit date:2009-06-02
Release date:2009-08-11
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human collagen XVIII trimerization domain: A novel collagen trimerization Fold.
J.Mol.Biol., 392, 2009
3HSH
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CRYSTAL STRUCTURE OF HUMAN COLLAGEN XVIII TRIMERIZATION DOMAIN (TETRAGONAL CRYSTAL FORM)
Descriptor:Collagen alpha-1(XVIII) chain, SULFATE ION, GLYCEROL
Authors:Boudko, S.P., Bachinger, H.P.
Deposit date:2009-06-10
Release date:2009-08-11
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of human collagen XVIII trimerization domain: A novel collagen trimerization Fold.
J.Mol.Biol., 392, 2009
4FRU
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CRYSTAL STRUCTURE OF HORSE WILD-TYPE CYCLOPHILIN B
Descriptor:Peptidyl-prolyl cis-trans isomerase, ZINC ION, 1-ETHOXY-2-(2-METHOXYETHOXY)ETHANE, ...
Authors:Boudko, S.P., Ishikawa, Y., Bachinger, H.P.
Deposit date:2012-06-26
Release date:2012-11-14
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structures of wild-type and mutated cyclophilin B that causes hyperelastosis cutis in the American quarter horse.
BMC Res Notes, 5, 2012
4FRV
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CRYSTAL STRUCTURE OF MUTATED CYCLOPHILIN B THAT CAUSES HYPERELASTOSIS CUTIS IN THE AMERICAN QUARTER HORSE
Descriptor:Peptidyl-prolyl cis-trans isomerase, ZINC ION, 1-ETHOXY-2-(2-METHOXYETHOXY)ETHANE, ...
Authors:Boudko, S.P., Ishikawa, Y., Bachinger, H.P.
Deposit date:2012-06-26
Release date:2012-11-14
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structures of wild-type and mutated cyclophilin B that causes hyperelastosis cutis in the American quarter horse.
BMC Res Notes, 5, 2012
4GYX
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THE VON WILLEBRAND FACTOR A3 DOMAIN BINDING REGION OF TYPE III COLLAGEN STABILIZED BY THE CYSTEINE KNOT
Descriptor:Type III collagen fragment in a host peptide stabilized by the cysteine knot
Authors:Boudko, S.P., Bachinger, H.P.
Deposit date:2012-09-05
Release date:2012-10-17
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:The NC2 Domain of Type IX Collagen Determines the Chain Register of the Triple Helix.
J.Biol.Chem., 287, 2012
4MSP
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CRYSTAL STRUCTURE OF HUMAN PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP22 (AKA FKBP14) CONTAINING TWO EF-HAND MOTIFS
Descriptor:Peptidyl-prolyl cis-trans isomerase FKBP14, CALCIUM ION, PENTAETHYLENE GLYCOL, ...
Authors:Boudko, S.P., Ishikawa, Y., Bachinger, H.P.
Deposit date:2013-09-18
Release date:2013-12-25
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of human peptidyl-prolyl cis-trans isomerase FKBP22 containing two EF-hand motifs.
Protein Sci., 23, 2014
5CTD
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CRYSTAL STRUCTURE OF THE TYPE IX COLLAGEN NC2 HETERO-TRIMERIZATION DOMAIN WITH A GUEST FRAGMENT A2A1A1 OF TYPE I COLLAGEN
Descriptor:Collagen alpha-1(I) chain,Collagen alpha-1(IX) chain, Collagen alpha-2(I) chain,Collagen alpha-2(IX) chain, Collagen alpha-1(I) chain,Collagen alpha-3(IX) chain
Authors:Boudko, S.P., Bachinger, H.P.
Deposit date:2015-07-23
Release date:2016-08-03
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (1.5991 Å)
Cite:Structural insight for chain selection and stagger control in collagen.
Sci Rep, 6, 2016
5CTI
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CRYSTAL STRUCTURE OF THE TYPE IX COLLAGEN NC2 HETERO-TRIMERIZATION DOMAIN WITH A GUEST FRAGMENT A2A1A1 OF TYPE I COLLAGEN (NATIVE FORM)
Descriptor:Collagen alpha-1(I) chain,Collagen alpha-1(IX) chain, Collagen alpha-2(I) chain,Collagen alpha-2(IX) chain, Collagen alpha-1(I) chain,Collagen alpha-3(IX) chain, ...
Authors:Boudko, S.P., Bachinger, H.P.
Deposit date:2015-07-24
Release date:2016-08-03
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (1.8994 Å)
Cite:Structural insight for chain selection and stagger control in collagen.
Sci Rep, 6, 2016
5CVA
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CRYSTAL STRUCTURE OF THE TYPE IX COLLAGEN NC2 HETERO-TRIMERIZATION DOMAIN WITH A GUEST FRAGMENT A1A2A1 OF TYPE I COLLAGEN
Descriptor:Collagen alpha-2(I) chain,Collagen alpha-1(IX) chain, Collagen alpha-1(I) chain,Collagen alpha-2(IX) chain, Collagen alpha-1(I) chain,Collagen alpha-3(IX) chain, ...
Authors:Boudko, S.P., Bachinger, H.P.
Deposit date:2015-07-25
Release date:2016-08-10
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (2.098 Å)
Cite:Structural insight for chain selection and stagger control in collagen.
Sci Rep, 6, 2016
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