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4Y0K
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BU of 4y0k by Molmil
Structure of crotonyl-CoA carboxylase/reductase AntE in complex with NADP
Descriptor: AntE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Abe, I, Zhang, L, Mori, T.
Deposit date:2015-02-06
Release date:2015-09-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.203 Å)
Cite:Rational Control of Polyketide Extender Units by Structure-Based Engineering of a Crotonyl-CoA Carboxylase/Reductase in Antimycin Biosynthesis
Angew.Chem.Int.Ed.Engl., 54, 2015
4Y1B
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BU of 4y1b by Molmil
Structure of crotonyl-CoA carboxylase/reductase AntE V350A in complex with NADP
Descriptor: AntE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Abe, I, Zhang, L, Mori, T.
Deposit date:2015-02-07
Release date:2015-09-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Rational Control of Polyketide Extender Units by Structure-Based Engineering of a Crotonyl-CoA Carboxylase/Reductase in Antimycin Biosynthesis
Angew.Chem.Int.Ed.Engl., 54, 2015
7VBR
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BU of 7vbr by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxI
Descriptor: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxI
Authors:Li, X, Awakawa, T, Mori, T, Abe, I.
Deposit date:2021-09-01
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Heterodimeric Non-heme Iron Enzymes in Fungal Meroterpenoid Biosynthesis.
J.Am.Chem.Soc., 143, 2021
7VBQ
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BU of 7vbq by Molmil
Heterodimer structure of Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxIJ
Descriptor: FE (III) ION, Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxI, Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxJ, ...
Authors:Li, X, Awakawa, T, Mori, T, Abe, I.
Deposit date:2021-09-01
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Heterodimeric Non-heme Iron Enzymes in Fungal Meroterpenoid Biosynthesis.
J.Am.Chem.Soc., 143, 2021
5YK9
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BU of 5yk9 by Molmil
Crystal structure of selenomethionine-labelled indole prenyltransferase AmbP1
Descriptor: AmbP1
Authors:Awakawa, T, Nakashima, Y, Liu, X, Abe, I.
Deposit date:2017-10-12
Release date:2018-06-06
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1
Angew. Chem. Int. Ed. Engl., 57, 2018
6J82
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BU of 6j82 by Molmil
Crystal structure of TleB apo
Descriptor: Cytochrome P-450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Alblova, M, Nakamura, H, Mori, T, Abe, I.
Deposit date:2019-01-18
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Molecular basis for the P450-catalyzed C-N bond formation in indolactam biosynthesis.
Nat.Chem.Biol., 15, 2019
6J88
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BU of 6j88 by Molmil
Crystal structure of HinD with benzo[b]thiophen analog
Descriptor: N-[(2S)-1-(1-benzothiophen-3-yl)-3-hydroxypropan-2-yl]-N~2~-methyl-L-valinamide, Nocardicin N-oxygenase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Fei, H, Mori, T, Abe, I.
Deposit date:2019-01-18
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Molecular basis for the P450-catalyzed C-N bond formation in indolactam biosynthesis.
Nat.Chem.Biol., 15, 2019
6J85
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BU of 6j85 by Molmil
Crystal structure of HinD apo
Descriptor: Nocardicin N-oxygenase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Fei, H, Mori, T, Abe, I.
Deposit date:2019-01-18
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular basis for the P450-catalyzed C-N bond formation in indolactam biosynthesis.
Nat.Chem.Biol., 15, 2019
6J86
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BU of 6j86 by Molmil
Crystal structure of HinD with NMFT
Descriptor: N-[(2S)-1-hydroxy-3-(1H-indol-3-yl)propan-2-yl]-Nalpha-methyl-L-phenylalaninamide, Nocardicin N-oxygenase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Fei, H, Mori, T, Abe, I.
Deposit date:2019-01-18
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular basis for the P450-catalyzed C-N bond formation in indolactam biosynthesis.
Nat.Chem.Biol., 15, 2019
6J83
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BU of 6j83 by Molmil
Crystal structure of TleB with NMVT
Descriptor: Cytochrome P-450, N-[(2S)-1-hydroxy-3-(1H-indol-3-yl)propan-2-yl]-N~2~-methyl-L-valinamide, PROTOPORPHYRIN IX CONTAINING FE
Authors:Fei, H, Mori, T, Abe, I.
Deposit date:2019-01-18
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular basis for the P450-catalyzed C-N bond formation in indolactam biosynthesis.
Nat.Chem.Biol., 15, 2019
6J84
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BU of 6j84 by Molmil
Crystal structure of TleB with hydroxyl analog
Descriptor: (2S)-2-hydroxy-N-[(2S)-1-hydroxy-3-(1H-indol-3-yl)propan-2-yl]-3-methylbutanamide, Cytochrome P-450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nakamura, H, Mori, T, Abe, I.
Deposit date:2019-01-18
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis for the P450-catalyzed C-N bond formation in indolactam biosynthesis.
Nat.Chem.Biol., 15, 2019
6J87
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BU of 6j87 by Molmil
Crystal structure of HinD with NMFT and NO
Descriptor: N-[(2S)-1-hydroxy-3-(1H-indol-3-yl)propan-2-yl]-Nalpha-methyl-L-phenylalaninamide, NITRIC OXIDE, Nocardicin N-oxygenase, ...
Authors:Fei, H, Mori, T, Abe, I.
Deposit date:2019-01-18
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular basis for the P450-catalyzed C-N bond formation in indolactam biosynthesis.
Nat.Chem.Biol., 15, 2019
8IYE
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BU of 8iye by Molmil
Structure of VldE-D158N in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Validamine 7-phosphate valienyltransferase
Authors:Wong, C.P, Mori, T, Mahmud, T, Abe, I.
Deposit date:2023-04-04
Release date:2024-04-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of VldE-D158N in complex with GDP
To Be Published
8IXQ
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BU of 8ixq by Molmil
Structure of glycosyltransferase LmbT in complex with GDP and ergothioneine
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Glycosyltransferase, trimethyl-[(2S)-1-oxidanyl-1-oxidanylidene-3-(2-sulfanylidene-1,3-dihydroimidazol-4-yl)propan-2-yl]azanium
Authors:Mori, T, Sun, X, Abe, I.
Deposit date:2023-04-02
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of glycosyltransferase LmbT in complex with GDP and ergothioneine
To Be Published
8IYF
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BU of 8iyf by Molmil
Structure of VldE-H182A in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Validamine 7-phosphate valienyltransferase
Authors:Wong, C.P, Mori, T, Mahmud, T, Abe, I.
Deposit date:2023-04-04
Release date:2024-04-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of VldE-H182A in complex with GDP
To Be Published
8IXP
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BU of 8ixp by Molmil
Apo structure of glycosyltransferase LmbT wild type
Descriptor: Glycosyltransferase
Authors:Mori, T, Sun, X, Abe, I.
Deposit date:2023-04-02
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Apo structure of glycosyltransferase LmbT wild type
To Be Published
3WXZ
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BU of 3wxz by Molmil
The structure of the I375F mutant of CsyB
Descriptor: Putative uncharacterized protein csyB
Authors:Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
Deposit date:2014-08-13
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
3WY0
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BU of 3wy0 by Molmil
The I375W mutant of CsyB complexed with CoA-SH
Descriptor: COENZYME A, Putative uncharacterized protein csyB
Authors:Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
Deposit date:2014-08-13
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
3WXY
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BU of 3wxy by Molmil
Crystal structure of CsyB complexed with CoA-SH
Descriptor: COENZYME A, Putative uncharacterized protein csyB
Authors:Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
Deposit date:2014-08-13
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.706 Å)
Cite:Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
7BVR
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BU of 7bvr by Molmil
DgpB-DgpC complex apo
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AP_endonuc_2 domain-containing protein, DgpB, ...
Authors:Mori, T, He, H, Abe, I.
Deposit date:2020-04-11
Release date:2021-04-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:C-Glycoside metabolism in the gut and in nature: Identification, characterization, structural analyses and distribution of C-C bond-cleaving enzymes.
Nat Commun, 12, 2021
7BVS
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BU of 7bvs by Molmil
DfgA-DfgB complex apo
Descriptor: DfgB, GLYCEROL, MANGANESE (II) ION, ...
Authors:Mori, T, He, H, Abe, I.
Deposit date:2020-04-11
Release date:2021-04-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:C-Glycoside metabolism in the gut and in nature: Identification, characterization, structural analyses and distribution of C-C bond-cleaving enzymes.
Nat Commun, 12, 2021
5GK2
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BU of 5gk2 by Molmil
The structure of the H302A mutant of StlD
Descriptor: Ketosynthase StlD
Authors:Mori, T, Dngfeng, Y, Morita, H, Abe, I.
Deposit date:2016-07-03
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structural Insight into the Enzymatic Formation of Bacterial Stilbene.
Cell Chem Biol, 23, 2016
5GK0
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BU of 5gk0 by Molmil
Crystal structure of selnomethionin-labeled ketosynthase StlD
Descriptor: Ketosynthase StlD
Authors:Mori, T, Saito, Y, Morita, H, Abe, I.
Deposit date:2016-07-03
Release date:2017-07-05
Last modified:2019-01-16
Method:X-RAY DIFFRACTION (2.331 Å)
Cite:Structural Insight into the Enzymatic Formation of Bacterial Stilbene.
Cell Chem Biol, 23, 2016
5GK1
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BU of 5gk1 by Molmil
Crystal structure of the ketosynthase StlD complexed with substrate
Descriptor: 3-OXO-5-METHYLHEXANOIC ACID, Ketosynthase StlD
Authors:Mori, T, Saito, Y, Morita, H, Abe, I.
Deposit date:2016-07-03
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural Insight into the Enzymatic Formation of Bacterial Stilbene.
Cell Chem Biol, 23, 2016
5Z43
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BU of 5z43 by Molmil
Crystal structure of prenyltransferase AmbP1 apo structure
Descriptor: AmbP1, MAGNESIUM ION
Authors:Awakawa, T, Nakashima, Y, Mori, T, Abe, I.
Deposit date:2018-01-10
Release date:2018-06-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.361 Å)
Cite:Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1
Angew. Chem. Int. Ed. Engl., 57, 2018

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