Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1Z24
DownloadVisualize
BU of 1z24 by Molmil
The molecular structure of insecticyanin from the tobacco hornworm Manduca sexta L. at 2.6 A resolution.
Descriptor: BILIVERDIN IX GAMMA CHROMOPHORE, Insecticyanin A form
Authors:Holden, H.M, Rypniewski, W.R, Law, J.H, Rayment, I.
Deposit date:2005-03-07
Release date:2005-04-05
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The molecular structure of insecticyanin from the tobacco hornworm Manduca sexta L. at 2.6 A resolution.
Embo J., 6, 1987
4TMN
DownloadVisualize
BU of 4tmn by Molmil
SLOW-AND FAST-BINDING INHIBITORS OF THERMOLYSIN DISPLAY DIFFERENT MODES OF BINDING. CRYSTALLOGRAPHIC ANALYSIS OF EXTENDED PHOSPHONAMIDATE TRANSITION-STATE ANALOGUES
Descriptor: CALCIUM ION, N-[(S)-[(1R)-1-{[(benzyloxy)carbonyl]amino}-2-phenylethyl](hydroxy)phosphoryl]-L-leucyl-L-alanine, THERMOLYSIN, ...
Authors:Holden, H.M, Tronrud, D.E, Monzingo, A.F, Weaver, L.H, Matthews, B.W.
Deposit date:1987-06-29
Release date:1989-01-09
Last modified:2022-11-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Slow- and fast-binding inhibitors of thermolysin display different modes of binding: crystallographic analysis of extended phosphonamidate transition-state analogues.
Biochemistry, 26, 1987
3TMN
DownloadVisualize
BU of 3tmn by Molmil
THE BINDING OF L-VALYL-L-TRYPTOPHAN TO CRYSTALLINE THERMOLYSIN ILLUSTRATES THE MODE OF INTERACTION OF A PRODUCT OF PEPTIDE HYDROLYSIS
Descriptor: CALCIUM ION, THERMOLYSIN, TRYPTOPHAN, ...
Authors:Holden, H.M, Matthews, B.W.
Deposit date:1987-06-29
Release date:1989-01-09
Last modified:2022-11-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The binding of L-valyl-L-tryptophan to crystalline thermolysin illustrates the mode of interaction of a product of peptide hydrolysis.
J.Biol.Chem., 263, 1988
5TMN
DownloadVisualize
BU of 5tmn by Molmil
Slow-and fast-binding inhibitors of thermolysin display different modes of binding. crystallographic analysis of extended phosphonamidate transition-state analogues
Descriptor: CALCIUM ION, N-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-L-leucyl-L-leucine, THERMOLYSIN, ...
Authors:Holden, H.M, Tronrud, D.E, Monzingo, A.F, Weaver, L.H, Matthews, B.W.
Deposit date:1987-06-29
Release date:1989-01-09
Last modified:2022-11-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Slow- and fast-binding inhibitors of thermolysin display different modes of binding: crystallographic analysis of extended phosphonamidate transition-state analogues.
Biochemistry, 26, 1987
1TLK
DownloadVisualize
BU of 1tlk by Molmil
X-RAY STRUCTURE DETERMINATION OF TELOKIN, THE C-TERMINAL DOMAIN OF MYOSIN LIGHT CHAIN KINASE, AT 2.8 ANGSTROMS RESOLUTION
Descriptor: TELOKIN
Authors:Holden, H.M, Rayment, I.
Deposit date:1992-07-20
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-ray structure determination of telokin, the C-terminal domain of myosin light chain kinase, at 2.8 A resolution.
J.Mol.Biol., 227, 1992
1EI6
DownloadVisualize
BU of 1ei6 by Molmil
CRYSTAL STRUCTURE OF PHOSPHONOACETATE HYDROLASE COMPLEXED WITH PHOSPHONOFORMATE
Descriptor: L(+)-TARTARIC ACID, PHOSPHONOACETATE HYDROLASE, PHOSPHONOFORMIC ACID, ...
Authors:Holden, H.M, Benning, M.M, Dunaway-Mariano, D, Kim, A.D.
Deposit date:2000-02-24
Release date:2003-11-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Phosphonoacetate Hydrolase complexed with phosphonoformate
To be Published
4KCF
DownloadVisualize
BU of 4kcf by Molmil
X-ray Structure of a KijD3 in Complex with FMN and dTDP-3-amino-2,3,6-trideoxy-4-keto-3-methyl-D-glucose
Descriptor: FAD-dependent oxidoreductase, FLAVIN MONONUCLEOTIDE, [(2R,4S,6R)-4-azanyl-4,6-dimethyl-5,5-bis(oxidanyl)oxan-2-yl] [[(2R,3S,5R)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate
Authors:Holden, H.M, Thoden, J.B, Branch, M.C, Zimmer, A.L, Bruender, N.A.
Deposit date:2013-04-24
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.098 Å)
Cite:Active site architecture of a sugar N-oxygenase.
Biochemistry, 52, 2013
4HMZ
DownloadVisualize
BU of 4hmz by Molmil
Crystal Structure of ChmJ, a 3'-monoepimerase from Streptomyces bikiniensis in complex with dTDP-quinovose
Descriptor: 1,2-ETHANEDIOL, Putative 3-epimerase in D-allose pathway, [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl (2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyltetrahydro-2H-pyran-2-yl dihydrogen diphosphate
Authors:Holden, H.M, Kubiak, R.L.
Deposit date:2012-10-18
Release date:2012-11-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Functional Studies on a 3'-Epimerase Involved in the Biosynthesis of dTDP-6-deoxy-d-allose.
Biochemistry, 51, 2012
4HN0
DownloadVisualize
BU of 4hn0 by Molmil
Crystal Structure of ChmJ, a 3'-monoepimerase apoenzyme from Streptomyces bikiniensis
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Putative 3-epimerase in D-allose pathway
Authors:Holden, H.M, Kubiak, R.L.
Deposit date:2012-10-18
Release date:2012-11-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and Functional Studies on a 3'-Epimerase Involved in the Biosynthesis of dTDP-6-deoxy-d-allose.
Biochemistry, 51, 2012
4HN1
DownloadVisualize
BU of 4hn1 by Molmil
Crystal Structure of H60N/Y130F double mutant of ChmJ, a 3'-monoepimerase from Streptomyces bikiniensis in complex with dTDP
Descriptor: 1,2-ETHANEDIOL, Putative 3-epimerase in D-allose pathway, THYMIDINE, ...
Authors:Holden, H.M, Kubiak, R.L.
Deposit date:2012-10-18
Release date:2012-11-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and Functional Studies on a 3'-Epimerase Involved in the Biosynthesis of dTDP-6-deoxy-d-allose.
Biochemistry, 51, 2012
4J7G
DownloadVisualize
BU of 4j7g by Molmil
Crystal structure of EvaA, a 2,3-dehydratase in complex with dTDP-fucose and dTDP-rhamnose
Descriptor: 2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE, EvaA 2,3-dehydratase, [[(2R,3S,5R)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3R,4S,5R,6R)-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl] hydrogen phosphate
Authors:Holden, H.M, Kubiak, R.L, Thoden, J.B.
Deposit date:2013-02-13
Release date:2013-05-22
Last modified:2013-12-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of EvaA: A Paradigm for Sugar 2,3-Dehydratases.
Biochemistry, 52, 2013
4J7H
DownloadVisualize
BU of 4j7h by Molmil
Crystal structure of EvaA, a 2,3-dehydratase in complex with dTDP-benzene and dTDP-rhamnose
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phenoxy)phosphoryl]oxy}phosphoryl]thymidine, ...
Authors:Holden, H.M, Kubiak, R.L, Thoden, J.B.
Deposit date:2013-02-13
Release date:2013-05-22
Last modified:2013-12-25
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structure of EvaA: A Paradigm for Sugar 2,3-Dehydratases.
Biochemistry, 52, 2013
1BVQ
DownloadVisualize
BU of 1bvq by Molmil
THREE-DIMENSIONAL STRUCTURE OF 4-HYDROXYBENZOYL COA THIOESTERASE FROM PSEUDOMONAS SP. STRAIN CBS-3.
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, PROTEIN (4-HYDROXYBENZOYL COA THIOESTERASE)
Authors:Holden, H.M, Benning, M.M, Dunaway-Mariano, D.
Deposit date:1998-09-16
Release date:1998-09-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The three-dimensional structure of 4-hydroxybenzoyl-CoA thioesterase from Pseudomonas sp. Strain CBS-3.
J.Biol.Chem., 273, 1998
3GR9
DownloadVisualize
BU of 3gr9 by Molmil
Crystal structure of ColD H188K S187N
Descriptor: 2-OXOGLUTARIC ACID, ColD
Authors:Holden, H.M, Cook, P.D, Kubiak, R.L, Toomey, D.P.
Deposit date:2009-03-25
Release date:2009-06-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Two Site-Directed Mutations Are Required for the Conversion of a Sugar Dehydratase into an Aminotransferase.
Biochemistry, 48, 2009
3BXO
DownloadVisualize
BU of 3bxo by Molmil
Crystal Structure of Streptomyces venezuelae DesVI
Descriptor: 1,2-ETHANEDIOL, N,N-dimethyltransferase, PHENYL-URIDINE-5'-DIPHOSPHATE, ...
Authors:Holden, H.M, Burgie, E.S.
Deposit date:2008-01-14
Release date:2008-03-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-Dimensional Structure of DesVI from Streptomyces venezuelae: A Sugar N,N-Dimethyltransferase Required for dTDP-Desosamine Biosynthesis.
Biochemistry, 47, 2008
3DR7
DownloadVisualize
BU of 3dr7 by Molmil
GDP-perosamine synthase from Caulobacter crescentus with bound GDP-3-deoxyperosamine
Descriptor: (2R,3S,5S,6R)-5-amino-3-hydroxy-6-methyl-oxan-2-yl, 1,2-ETHANEDIOL, Putative perosamine synthetase
Authors:Holden, H.M, Cook, P.D, Carney, A.E.
Deposit date:2008-07-10
Release date:2008-10-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Accommodation of GDP-linked sugars in the active site of GDP-perosamine synthase
Biochemistry, 47, 2008
3DR4
DownloadVisualize
BU of 3dr4 by Molmil
GDP-perosamine synthase K186A mutant from Caulobacter crescentus with bound sugar ligand
Descriptor: 1,2-ETHANEDIOL, Putative perosamine synthetase, [(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3S,4S,5S,6R)-3,4-dihydroxy-5-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]-6-methyltetrahydro-2H-pyran-2-yl dihydrogen diphosphate
Authors:Holden, H.M, Cook, P.D, Carney, A.E.
Deposit date:2008-07-10
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Accommodation of GDP-linked sugars in the active site of GDP-perosamine synthase
Biochemistry, 47, 2008
3ETJ
DownloadVisualize
BU of 3etj by Molmil
Crystal structure E. coli Purk in complex with Mg, ADP, and Pi
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, HYDROGENPHOSPHATE ION, ...
Authors:Holden, H.M, Thoden, J.B.
Deposit date:2008-10-08
Release date:2008-10-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural analysis of the active site geometry of N(5)-Carboxyaminoimidazole ribonucleotide synthetase from Escherichia coli.
Biochemistry, 47, 2008
3ETH
DownloadVisualize
BU of 3eth by Molmil
Crystal structure of E. coli Purk in complex with MgATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Phosphoribosylaminoimidazole carboxylase ATPase subunit
Authors:Holden, H.M, Thoden, J.B.
Deposit date:2008-10-08
Release date:2008-10-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural analysis of the active site geometry of N(5)-Carboxyaminoimidazole ribonucleotide synthetase from Escherichia coli.
Biochemistry, 47, 2008
5BUV
DownloadVisualize
BU of 5buv by Molmil
X-ray structure of WbcA from Yersinia enterocolitica
Descriptor: 1,2-ETHANEDIOL, 6-AMINOPYRIMIDIN-2(1H)-ONE, PHOSPHATE ION, ...
Authors:Holden, H.M, Salinger, A.J, Brown, H.A, Thoden, J.B.
Deposit date:2015-06-04
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Biochemical studies on WbcA, a sugar epimerase from Yersinia enterocolitica.
Protein Sci., 24, 2015
5KF1
DownloadVisualize
BU of 5kf1 by Molmil
X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum, apo form, pH 5
Descriptor: 1,2-ETHANEDIOL, ACETYL COENZYME *A, COENZYME A, ...
Authors:Holden, H.M, Thoden, J.B, Dopkins, B.J, tipton, P.A.
Deposit date:2016-06-11
Release date:2016-07-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Studies on a Glucosamine/Glucosaminide N-Acetyltransferase.
Biochemistry, 55, 2016
5KF2
DownloadVisualize
BU of 5kf2 by Molmil
X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum, apo form, pH 8
Descriptor: 1,2-ETHANEDIOL, ACETYL COENZYME *A, COENZYME A, ...
Authors:Holden, H.M, Thoden, J.B, Dopkins, B.J, Tipton, P.A.
Deposit date:2016-06-11
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Studies on a Glucosamine/Glucosaminide N-Acetyltransferase.
Biochemistry, 55, 2016
3R37
DownloadVisualize
BU of 3r37 by Molmil
Crystal structure of Arthrobacter sp. strain SU 4-hydroxybenzoyl CoA thioesterase mutant E73Q complexed with 4-hydroxyphenacyl CoA
Descriptor: 4-HYDROXYPHENACYL COENZYME A, 4-hydroxybenzoyl-CoA thioesterase
Authors:Holden, H.M, Thoden, J.B, Song, F, Zhuang, Z, Trujillo, M, Dunaway-Mariano, D.
Deposit date:2011-03-15
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Catalytic Mechanism of the Hotdog-fold Enzyme Superfamily 4-Hydroxybenzoyl-CoA Thioesterase from Arthrobacter sp. Strain SU.
Biochemistry, 51, 2012
3R3D
DownloadVisualize
BU of 3r3d by Molmil
Crystal structure of Arthrobacter sp. strain SU 4-hydroxybenzoyl CoA thioesterase mutant T77S complexed with 4-hydroxyphenacyl CoA
Descriptor: 4-HYDROXYPHENACYL COENZYME A, 4-hydroxybenzoyl-CoA thioesterase
Authors:Holden, H.M, Thoden, J.B, Song, F, Zhuang, Z, Trujillo, M, Dunaway-Mariano, D.
Deposit date:2011-03-15
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Catalytic Mechanism of the Hotdog-fold Enzyme Superfamily 4-Hydroxybenzoyl-CoA Thioesterase from Arthrobacter sp. Strain SU.
Biochemistry, 51, 2012
3R36
DownloadVisualize
BU of 3r36 by Molmil
Crystal structure of Arthrobacter sp. strain SU 4-hydroxybenzoyl CoA thioesterase mutant E73Q complexed with 4-hydroxybenzoic acid
Descriptor: 4-hydroxybenzoyl-CoA thioesterase, P-HYDROXYBENZOIC ACID
Authors:Holden, H.M, Thoden, J.B, Song, F, Zhuang, Z, Trujillo, M, Dunaway-Mariano, D.
Deposit date:2011-03-15
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The Catalytic Mechanism of the Hotdog-fold Enzyme Superfamily 4-Hydroxybenzoyl-CoA Thioesterase from Arthrobacter sp. Strain SU.
Biochemistry, 51, 2012

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon