Author results

2ZPL
  • Download 2zpl
  • View 2zpl
Molmil generated image of 2zpl
CRYSTAL STRUCTURE ANALYSIS OF PDZ DOMAIN A
Descriptor:Regulator of sigma E protease, NICKEL (II) ION, GLYCEROL
Authors:Inaba, K., Suzuki, M.
Deposit date:2008-07-17
Release date:2008-10-21
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure analysis of PDZ-domain A
To be Published
2ZPM
  • Download 2zpm
  • View 2zpm
Molmil generated image of 2zpm
CRYSTAL STRUCTURE ANALYSIS OF PDZ DOMAIN B
Descriptor:Regulator of sigma E protease
Authors:Inaba, K., Suzuki, M.
Deposit date:2008-07-17
Release date:2008-10-21
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Crystal Structure analysis of PDZ-domain B
To be Published
3AHQ
  • Download 3ahq
  • View 3ahq
Molmil generated image of 3ahq
HYPERACTIVE HUMAN ERO1
Descriptor:ERO1-like protein alpha, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Inaba, K., Sitia, R., Suzuki, M.
Deposit date:2010-04-26
Release date:2010-12-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of human Ero1-alpha reveal the mechanisms of regulated and targeted oxidation of PDI
Embo J., 29, 2010
3AHR
  • Download 3ahr
  • View 3ahr
Molmil generated image of 3ahr
INACTIVE HUMAN ERO1
Descriptor:ERO1-like protein alpha, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Inaba, K., Sitia, R., Suzuki, M.
Deposit date:2010-04-26
Release date:2010-12-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Crystal structures of human Ero1-alpha reveal the mechanisms of regulated and targeted oxidation of PDI
Embo J., 29, 2010
3ALP
  • Download 3alp
  • View 3alp
Molmil generated image of 3alp
CELL ADHESION PROTEIN
Descriptor:Poliovirus receptor-related protein 1, CITRIC ACID, HEXANE-1,6-DIOL
Authors:Narita, H., Nakagawa, A., Suzuki, M.
Deposit date:2010-08-05
Release date:2011-02-16
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Crystal Structure of the cis-Dimer of Nectin-1: implications for the architecture of cell-cell junctions
J.Biol.Chem., 286, 2011
3VJJ
  • Download 3vjj
  • View 3vjj
Molmil generated image of 3vjj
CRYSTAL STRUCTURE ANALYSIS OF THE P9-1
Descriptor:P9-1
Authors:Akita, F., Higashiura, A., Suzuki, M., Tsukihara, T., Nakagawa, A., Omura, T.
Deposit date:2011-10-24
Release date:2011-12-21
Last modified:2013-07-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic analysis reveals octamerization of viroplasm matrix protein P9-1 of Rice black streaked dwarf virus
J.Virol., 86, 2012
3VPQ
  • Download 3vpq
  • View 3vpq
Molmil generated image of 3vpq
CRYSTAL STRUCTURE OF BOMBYX MORI SIGMA-CLASS GLUTATHIONE TRANSFERASE IN COMPLEX WITH GLUTATHIONE
Descriptor:Glutathione S-transferase sigma, GLUTATHIONE, S-1,2-PROPANEDIOL, ...
Authors:Yamamoto, K., Higashiura, A., Nakagawa, A., Suzuki, M.
Deposit date:2012-03-08
Release date:2013-03-06
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Crystal structure of a Bombyx mori sigma-class glutathione transferase exhibiting prostaglandin E synthase activity
Biochim.Biophys.Acta, 1830, 2013
3VPT
  • Download 3vpt
  • View 3vpt
Molmil generated image of 3vpt
CRYSTAL STRUCTURE OF BOMBYX MORI SIGMA-CLASS GLUTATHIONE TRANSFERASE IN APO FORM
Descriptor:Glutathione S-transferase sigma, S-1,2-PROPANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Yamamoto, K., Higashiura, A., Suzuki, M., Nakagawa, A.
Deposit date:2012-03-13
Release date:2013-03-06
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a Bombyx mori sigma-class glutathione transferase exhibiting prostaglandin E synthase activity
Biochim.Biophys.Acta, 1830, 2013
3VUR
  • Download 3vur
  • View 3vur
Molmil generated image of 3vur
CRYSTAL STRUCTURE OF BOMBYX MORI SIGMA-CLASS GLUTATHIONE TRANSFERASE IN COMPLEX WITH GLUTATHIONESULFONIC ACID
Descriptor:Glutathione S-transferase sigma, PENTAETHYLENE GLYCOL, GLUTATHIONE SULFONIC ACID
Authors:Yamamoto, K., Higashiura, A., Nakagawa, A., Suzuki, M.
Deposit date:2012-07-05
Release date:2013-07-10
Method:X-RAY DIFFRACTION (1.365 Å)
Cite:Crystal structure of Bombyx mori sigma-class glutathione transferase in complex with glutathionesulfonic acid
TO BE PUBLISHED
3WA2
  • Download 3wa2
  • View 3wa2
Molmil generated image of 3wa2
HIGH RESOLUTION CRYSTAL STRUCTURE OF COPPER AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS
Descriptor:Phenylethylamine oxidase, COPPER (II) ION, SODIUM ION, ...
Authors:Murakawa, T., Hayashi, H., Sunami, T., Kurihara, K., Tamada, T., Kuroki, R., Suzuki, M., Tanizawa, K., Okajima, T.
Deposit date:2013-04-22
Release date:2013-09-11
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:High-resolution crystal structure of copper amine oxidase from Arthrobacter globiformis: assignment of bound diatomic molecules as O2
Acta Crystallogr.,Sect.D, 69, 2013
3WA3
  • Download 3wa3
  • View 3wa3
Molmil generated image of 3wa3
CRYSTAL STRUCTURE OF COPPER AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS IN N2 CONDITION
Descriptor:Phenylethylamine oxidase, COPPER (II) ION, SODIUM ION, ...
Authors:Murakawa, T., Hayashi, H., Sunami, T., Kurihara, K., Tamada, T., Kuroki, R., Suzuki, M., Tanizawa, K., Okajima, T.
Deposit date:2013-04-22
Release date:2013-09-11
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:High-resolution crystal structure of copper amine oxidase from Arthrobacter globiformis: assignment of bound diatomic molecules as O2
Acta Crystallogr.,Sect.D, 69, 2013
3WD6
  • Download 3wd6
  • View 3wd6
Molmil generated image of 3wd6
CRYSTAL STRUCTURE OF BOMBYX MORI OMEGA-CLASS GLUTATHIONE TRANSFERASE IN COMPLEX WITH GSH
Descriptor:Omega-class glutathione S-transferase, POTASSIUM ION, 1,2-ETHANEDIOL, ...
Authors:Yamamoto, K., Suzuki, M., Higashiura, A., Nakagawa, A.
Deposit date:2013-06-07
Release date:2014-07-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of a Bombyx mori Omega-class glutathione transferase.
Biochem.Biophys.Res.Commun., 438, 2013
3WHO
  • Download 3who
  • View 3who
Molmil generated image of 3who
X-RAY-CRYSTALLOGRAPHIC STRUCTURE OF AN RNASE PO1 EXHIBITING ANTI-TUMOR ACTIVITY
Descriptor:Guanyl-specific ribonuclease Po1
Authors:Kobayashi, H., Katsurtani, T., Hara, Y., Motoyoshi, N., Itagaki, T., Akita, F., Higashiura, A., Yamada, Y., Suzuki, M., Inokuchi, N.
Deposit date:2013-08-30
Release date:2014-07-02
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:X-Ray Crystallographic Structure of RNase Po1 That Exhibits Anti-tumor Activity
Biol.Pharm.Bull., 37, 2014
3WR2
  • Download 3wr2
  • View 3wr2
Molmil generated image of 3wr2
RNASE PO1 COMPLEXED WITH 3'GMP
Descriptor:Guanyl-specific ribonuclease Po1, GUANOSINE-3'-MONOPHOSPHATE
Authors:Hara, Y., Katsutani, T., Kobayashi, H., Suzuki, M.
Deposit date:2014-02-13
Release date:2015-02-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:RNase Po1 complexed with 3'GMP
to be published
5AZ0
  • Download 5az0
  • View 5az0
Molmil generated image of 5az0
CRYSTAL STRUCTURE OF ALDO-KETO REDUCTASE (AKR2E5) OF THE SILKWORM, BOMBYX MORI
Descriptor:Uncharacterized protein, CALCIUM ION, 1,2-ETHANEDIOL, ...
Authors:Yamamoto, K., Higashiura, A., Suzuki, M., Nakagawa, A.
Deposit date:2015-09-15
Release date:2016-02-10
Last modified:2016-05-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural characterization of an aldo-keto reductase (AKR2E5) from the silkworm Bombyx mori
Biochem.Biophys.Res.Commun., 474, 2016
5AZ1
  • Download 5az1
  • View 5az1
Molmil generated image of 5az1
CRYSTAL STRUCTURE OF ALDO-KETO REDUCTASE (AKR2E5) COMPLEXED WITH NADPH
Descriptor:Uncharacterized protein, CALCIUM ION, 1,2-ETHANEDIOL, ...
Authors:Yamamoto, K., Higashiura, A., Suzuki, M., Nakagawa, A.
Deposit date:2015-09-15
Release date:2016-02-10
Last modified:2016-05-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural characterization of an aldo-keto reductase (AKR2E5) from the silkworm Bombyx mori
Biochem.Biophys.Res.Commun., 474, 2016
5B21
  • Download 5b21
  • View 5b21
Molmil generated image of 5b21
DIMER STRUCTURE OF MURINE NECTIN-1 D1
Descriptor:murine Nectin-1 D1
Authors:Sangawa, T., Takebe, K., Suzuki, M.
Deposit date:2015-12-28
Release date:2016-12-28
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Dimer structure of murine Nectin-1 D1
To Be Published
5B22
  • Download 5b22
  • View 5b22
Molmil generated image of 5b22
DIMER STRUCTURE OF MURINE NECTIN-3 D1D2
Descriptor:Nectin-3, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE
Authors:Takebe, K., Sangawa, T., Katsutani, T., Narita, H., Suzuki, M.
Deposit date:2015-12-28
Release date:2016-12-28
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Dimer structure of murine Nectin-3 D1D2
To Be Published
5GQP
  • Download 5gqp
  • View 5gqp
Molmil generated image of 5gqp
THAUMATIN STRUCTURE AT PH 8.0, ORTHORHOMBIC TYPE1
Descriptor:Thaumatin I
Authors:Masuda, T., Sano, A., Murata, K., Okubo, K., Suzuki, M., Mikami, B.
Deposit date:2016-08-08
Release date:2017-08-09
Method:X-RAY DIFFRACTION (1.296 Å)
Cite:Thaumatin Structure at pH 8.0, orthorhombic type1
To Be Published
5GY6
  • Download 5gy6
  • View 5gy6
Molmil generated image of 5gy6
RIBONUCLEASE FROM HERICIUM ERINACEUS (RNASE HE1)
Descriptor:Ribonuclease T1, ZINC ION
Authors:Kobayashi, H., Sangawa, T., Takebe, K., Itagaki, T., Motoyoshi, N., Suzuki, M.
Deposit date:2016-09-21
Release date:2017-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Ribonuclease from Hericium erinaceus (RNase He1)
To Be Published
5SW0
  • Download 5sw0
  • View 5sw0
Molmil generated image of 5sw0
THAUMATIN STRUCTURE AT PH 4.0
Descriptor:Thaumatin I, PHOSPHATE ION
Authors:Masuda, T., Okubo, K., Suzuki, M., Mikami, B.
Deposit date:2016-08-08
Release date:2017-08-09
Method:X-RAY DIFFRACTION (1.269 Å)
Cite:Thaumatin Structure at pH 4.0
To Be Published
5SW1
  • Download 5sw1
  • View 5sw1
Molmil generated image of 5sw1
THAUMATIN STRUCTURE AT PH 6.0
Descriptor:Thaumatin I, (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID
Authors:Masuda, T., Sano, A., Murata, K., Okubo, K., Suzuki, M., Mikami, B.
Deposit date:2016-08-08
Release date:2017-08-09
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Thaumatin Structure at pH 6.0
To Be Published
5SW2
  • Download 5sw2
  • View 5sw2
Molmil generated image of 5sw2
THAUMATIN STRUCTURE AT PH 6.0, ORTHORHOMBIC TYPE1
Descriptor:Thaumatin I, GLYCEROL
Authors:Masuda, T., Sano, A., Murata, K., Okubo, K., Suzuki, M., Mikami, B.
Deposit date:2016-08-08
Release date:2017-08-09
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Thaumatin Structure at pH 6.0, orthorhombic type1
To Be Published
2EI6
  • Download 2ei6
  • View 2ei6
Molmil generated image of 2ei6
FACTOR XA IN COMPLEX WITH THE INHIBITOR (-)-CIS-N1-[(5-CHLOROINDOL-2-YL)CARBONYL]-N2-[(5-METHYL-4,5,6,7-TETRAHYDROTHIAZOLO[5,4-C]PYRIDIN-2-YL)CARBONYL]-1,2-CYCLOHEXANEDIAMINE
Descriptor:Coagulation factor X, heavy chain, light chain, ...
Authors:Suzuki, M.
Deposit date:2007-03-12
Release date:2008-03-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cycloalkanediamine derivatives as novel blood coagulation factor Xa inhibitors.
Bioorg.Med.Chem.Lett., 17, 2007
2EI7
  • Download 2ei7
  • View 2ei7
Molmil generated image of 2ei7
FACTOR XA IN COMPLEX WITH THE INHIBITOR TRANS-N1-[(5-CHLOROINDOL-2-YL)CARBONYL]-N2-[(5-METHYL-4,5,6,7-TETRAHYDROTHIAZOLO[5,4-C]PYRIDIN-2-YL)CARBONYL]-1,2-CYCLOHEXANEDIAMINE
Descriptor:Coagulation factor X, heavy chain, light chain, ...
Authors:Suzuki, M.
Deposit date:2007-03-12
Release date:2008-03-18
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cycloalkanediamine derivatives as novel blood coagulation factor Xa inhibitors
To be Published