Author results

2JSM
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MONOMERIC HUMAN TELOMERE DNA TETRAPLEX WITH 3+1 STRAND FOLD TOPOLOGY, TWO EDGEWISE LOOPS AND DOUBLE-CHAIN REVERSAL LOOP, NMR, 10 STRUCTURES, FORM 1 NATURAL
Descriptor:HUMAN TELOMERE DNA
Authors:Kuryavyi, V.V., Phan, A.T., Luu, K.N., Patel, D.J.
Deposit date:2007-07-09
Release date:2008-07-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution
Nucleic Acids Res., 35, 2007
2JSQ
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MONOMERIC HUMAN TELOMERE DNA TETRAPLEX WITH 3+1 STRAND FOLD TOPOLOGY, TWO EDGEWISE LOOPS AND DOUBLE-CHAIN REVERSAL LOOP, FORM 2 15BRG, NMR, 10 STRUCTURES
Descriptor:HUMAN TELOMERE DNA
Authors:Kuryavyi, V.V., Phan, A.T., Luu, K.N., Patel, D.J.
Deposit date:2007-07-11
Release date:2008-07-15
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution.
Nucleic Acids Res., 35, 2007
2KF7
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STRUCTURE OF A TWO-G-TETRAD BASKET-TYPE INTRAMOLECULAR G-QUADRUPLEX FORMED BY HUMAN TELOMERIC REPEATS IN K+ SOLUTION (WITH G7-TO-BRG SUBSTITUTION)
Descriptor:HUMAN TELOMERE DNA
Authors:Lim, K.W., Amrane, S., Bouaziz, S., Xu, W., Mu, Y., Patel, D.J., Luu, K.N., Phan, A.T.
Deposit date:2009-02-12
Release date:2009-03-24
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers
J.Am.Chem.Soc., 131, 2009
2KF8
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STRUCTURE OF A TWO-G-TETRAD BASKET-TYPE INTRAMOLECULAR G-QUADRUPLEX FORMED BY HUMAN TELOMERIC REPEATS IN K+ SOLUTION
Descriptor:HUMAN TELOMERE DNA
Authors:Lim, K.W., Amrane, S., Bouaziz, S., Xu, W., Mu, Y., Patel, D.J., Luu, K.N., Phan, A.T.
Deposit date:2009-02-12
Release date:2009-03-24
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers
J.Am.Chem.Soc., 131, 2009
2KGG
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SOLUTION STRUCTURE OF JARID1A C-TERMINAL PHD FINGER
Descriptor:Histone demethylase JARID1A, ZINC ION
Authors:Song, J., Wang, Z., Patel, D.J.
Deposit date:2009-03-11
Release date:2009-05-05
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Haematopoietic malignancies caused by dysregulation of a chromatin-binding PHD finger.
Nature, 459, 2009
2KGI
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SOLUTION STRUCTURE OF JARID1A C-TERMINAL PHD FINGER IN COMPLEX WITH H3(1-9)K4ME3
Descriptor:Histone demethylase JARID1A, H3(1-9)K4me3, ZINC ION
Authors:Song, J., Wang, Z., Patel, D.J.
Deposit date:2009-03-12
Release date:2009-05-05
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Haematopoietic malignancies caused by dysregulation of a chromatin-binding PHD finger.
Nature, 459, 2009
2KPR
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MONOMERIC INTRONIC HUMAN CHL1 GENE QUADRUPLEX DNA NMR, 17 STRUCTURES
Descriptor:5'-D(*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*GP*GP*GP*GP*TP*GP*GP*GP*T)-3'
Authors:Kuryavyi, V., Patel, D.J.
Deposit date:2009-10-19
Release date:2010-03-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution Structure of a Unique G-Quadruplex Scaffold Adopted by a Guanosine-Rich Human Intronic Sequence.
Structure, 18, 2010
2KYO
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DIMERIC HUMAN CKIT-2 PROTO-ONCOGENE PROMOTER QUADRUPLEX DNA NMR, 10 STRUCTURES
Descriptor:5'-D(*CP*GP*GP*GP*CP*GP*GP*GP*CP*GP*CP*GP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3'
Authors:Kuryavyi, V., Phan, A.T., Patel, D.J.
Deposit date:2010-06-05
Release date:2010-06-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structures of all parallel-stranded monomeric and dimeric G-quadruplex scaffolds of the human c-kit2 promoter.
Nucleic Acids Res., 38, 2010
2KYP
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MONOMERIC HUMAN CKIT-2 PROTO-ONCOGENE PROMOTER QUADRUPLEX DNA NMR, 12 STRUCTURES
Descriptor:5'-D(*CP*GP*GP*GP*CP*GP*GP*GP*CP*GP*CP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3'
Authors:Kuryavyi, V., Phan, A.T., Patel, D.J.
Deposit date:2010-06-06
Release date:2010-06-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structures of all parallel-stranded monomeric and dimeric G-quadruplex scaffolds of the human c-kit2 promoter.
Nucleic Acids Res., 38, 2010
2LXQ
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MONOMERIC PILE G-QUADRUPLEX DNA FROM NEISSERIA GONORRHOEAE
Descriptor:DNA (5'-D(*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*T)-3')
Authors:Kuryavyi, V.V., Patel, D.J.
Deposit date:2012-08-30
Release date:2012-11-28
Last modified:2012-12-26
Method:SOLUTION NMR
Cite:RecA-Binding pilE G4 Sequence Essential for Pilin Antigenic Variation Forms Monomeric and 5' End-Stacked Dimeric Parallel G-Quadruplexes.
Structure, 20, 2012
2LXV
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DIMERIC PIL-E G-QUADRUPLEX DNA FROM NEISSERIA GONORRHOEAE, NMR 11 STRUCTURES
Descriptor:5'-D(*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*GP*GP
Authors:Kuryavyi, V., Patel, D.J.
Deposit date:2012-08-31
Release date:2012-11-28
Last modified:2012-12-26
Method:SOLUTION NMR
Cite:RecA-Binding pilE G4 Sequence Essential for Pilin Antigenic Variation Forms Monomeric and 5' End-Stacked Dimeric Parallel G-Quadruplexes.
Structure, 20, 2012
2M0O
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THE SOLUTION STRUCTURE OF HUMAN PHF1 IN COMPLEX WITH H3K36ME3
Descriptor:PHD finger protein 1, H3K36me3 peptide
Authors:Song, J., Patel, D.J.
Deposit date:2012-10-30
Release date:2013-01-16
Last modified:2013-02-27
Method:SOLUTION NMR
Cite:An H3K36 Methylation-Engaging Tudor Motif of Polycomb-like Proteins Mediates PRC2 Complex Targeting.
Mol.Cell, 49, 2013
2O3M
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MONOMERIC G-DNA TETRAPLEX FROM HUMAN C-KIT PROMOTER
Descriptor:5'-D(*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*CP*TP*GP*GP*GP*AP*GP*GP*AP*GP*GP*G)-3'
Authors:Phan, A.T., Kuryavyi, V.V., Burge, S., Neidle, S., Patel, D.J.
Deposit date:2006-12-01
Release date:2007-05-22
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of an unprecedented G-quadruplex scaffold in the human c-kit promoter.
J.Am.Chem.Soc., 129, 2007
2OE5
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1.5 A X-RAY CRYSTAL STRUCTURE OF APRAMYCIN COMPLEX WITH RNA FRAGMENT GGCGUCGCUAGUACCG/GGUACUAAAAGUCGCCC CONTAINING THE HUMAN RIBOSOMAL DECODING A SITE: RNA CONSTRUCT WITH 3'-OVERHANG
Descriptor:RNA (5'-R(*GP*GP*CP*GP*UP*CP*GP*CP*UP*AP*GP*UP*AP*CP*CP*G)-3'), RNA (5'-R(*GP*GP*UP*AP*CP*UP*AP*AP*AP*AP*GP*UP*CP*GP*CP*CP*C)-3'), SULFATE ION, ...
Authors:Hermann, T., Tereshko, V., Skripkin, E., Patel, D.J.
Deposit date:2006-12-28
Release date:2007-02-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Apramycin recognition by the human ribosomal decoding site.
Blood Cells Mol.Dis., 38, 2007
2OE6
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2.4A X-RAY CRYSTAL STRUCTURE OF UNLIGANDED RNA FRAGMENT GGGCGUCGCUAGUACC/CGGUACUAAAAGUCGCC CONTAINING THE HUMAN RIBOSOMAL DECODING A SITE: RNA CONSTRUCT WITH 5'-OVERHANG
Descriptor:RNA (5'-R(*GP*GP*GP*CP*GP*UP*CP*GP*CP*UP*AP*GP*UP*AP*CP*C)-3'), RNA (5'-R(*CP*GP*GP*UP*AP*CP*UP*AP*AP*AP*AP*GP*UP*CP*GP*CP*C)-3')
Authors:Hermann, T., Tereshko, V., Skripkin, E., Patel, D.J.
Deposit date:2006-12-28
Release date:2007-02-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Apramycin recognition by the human ribosomal decoding site.
Blood Cells Mol.Dis., 38, 2007
2OE8
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1.8 A X-RAY CRYSTAL STRUCTURE OF APRAMYCIN COMPLEX WITH RNA FRAGMENT GGGCGUCGCUAGUACC/CGGUACUAAAAGUCGCC CONTAINING THE HUMAN RIBOSOMAL DECODING A SITE: RNA CONSTRUCT WITH 5'-OVERHANG
Descriptor:RNA (5'-R(*GP*GP*GP*CP*GP*UP*CP*GP*CP*UP*AP*GP*UP*AP*CP*C)-3'), RNA (5'-R(*CP*GP*GP*UP*AP*CP*UP*AP*AP*AP*AP*GP*UP*CP*GP*CP*C)-3'), APRAMYCIN
Authors:Hermann, T., Tereshko, V., Skripkin, E., Patel, D.J.
Deposit date:2006-12-28
Release date:2007-02-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Apramycin recognition by the human ribosomal decoding site.
Blood Cells Mol.Dis., 38, 2007
2RHI
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CRYSTAL STRUCTURE OF THE 3-MBT DOMAIN FROM HUMAN L3MBTL1 IN COMPLEX WITH H1.5K27ME2 AT 1.66 ANGSTROM
Descriptor:Lethal(3)malignant brain tumor-like protein, Histone H1.5, TETRAETHYLENE GLYCOL, ...
Authors:Li, H., Patel, D.J.
Deposit date:2007-10-09
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger.
Mol.Cell, 28, 2007
2RHU
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CRYSTAL STRUCTURE OF THE 3-MBT REPEATS FROM HUMAN L3MBTL1 BOUND TO DIMETHYL-LYSINE AND IN CHIMERA WITH HISTONE H3.3(28-34)
Descriptor:Lethal(3)malignant brain tumor-like protein, SULFATE ION, N-DIMETHYL-LYSINE, ...
Authors:Li, H., Patel, D.J.
Deposit date:2007-10-09
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger.
Mol.Cell, 28, 2007
2RHX
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CRYSTAL STRUCTURE OF THE 3-MBT REPEATS FROM HUMAN L3MBTL1 BOUND TO DIMETHYL-LYSINE
Descriptor:Lethal(3)malignant brain tumor-like protein, SULFATE ION, N-DIMETHYL-LYSINE, ...
Authors:Li, H., Patel, D.J.
Deposit date:2007-10-09
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger.
Mol.Cell, 28, 2007
2RHY
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CRYSTAL STRUCTURE OF THE 3-MBT REPEATS FROM HUMAN L3MBTL1 BOUND TO MONOMETHYL-LYSINE
Descriptor:Lethal(3)malignant brain tumor-like protein, N-METHYL-LYSINE, DI(HYDROXYETHYL)ETHER
Authors:Li, H., Patel, D.J.
Deposit date:2007-10-09
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger.
Mol.Cell, 28, 2007
2RHZ
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CRYSTAL STRUCTURE OF THE 3-MBT REPEATS FROM HUMAN L3MBTL1 WITH D355N POINT MUTATION
Descriptor:Lethal(3)malignant brain tumor-like protein, DI(HYDROXYETHYL)ETHER
Authors:Li, H., Patel, D.J.
Deposit date:2007-10-09
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger.
Mol.Cell, 28, 2007
2RI2
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CRYSTAL STRUCTURE OF THE 3-MBT REPEATS FROM HUMAN L3MBTL1 WITH D355A POINT MUTATION
Descriptor:Lethal(3)malignant brain tumor-like protein, SULFATE ION, TRIETHYLENE GLYCOL, ...
Authors:Li, H., Patel, D.J.
Deposit date:2007-10-10
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger.
Mol.Cell, 28, 2007
2RI3
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CRYSTAL STRUCTURE OF THE 3-MBT REPEATS FROM HUMAN L3MBTL1 WITH N358Q POINT MUTATION
Descriptor:Lethal(3)malignant brain tumor-like protein, DI(HYDROXYETHYL)ETHER
Authors:Li, H., Patel, D.J.
Deposit date:2007-10-10
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger.
Mol.Cell, 28, 2007
2RI5
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CRYSTAL STRUCTURE OF THE 3-MBT REPEATS FROM HUMAN L3MBTL1 WITH N358A POINT MUTATION
Descriptor:Lethal(3)malignant brain tumor-like protein, TRIETHYLENE GLYCOL, DI(HYDROXYETHYL)ETHER
Authors:Li, H., Patel, D.J.
Deposit date:2007-10-10
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger.
Mol.Cell, 28, 2007
2RI7
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CRYSTAL STRUCTURE OF PHD FINGER-LINKER-BROMODOMAIN Y17E MUTANT FROM HUMAN BPTF IN THE H3(1-9)K4ME2 BOUND STATE
Descriptor:Nucleosome-remodeling factor subunit BPTF, histone H3.1, ZINC ION, ...
Authors:Li, H., Patel, D.J.
Deposit date:2007-10-10
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger.
Mol.Cell, 28, 2007