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5ND9
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HIBERNATING RIBOSOME FROM STAPHYLOCOCCUS AUREUS (ROTATED STATE)
Descriptor:16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Khusainov, I., Vicens, Q., Ayupov, R., Usachev, K., Myasnikov, A., Simonetti, A., Validov, S., Kieffer, B., Yusupova, G., Yusupov, M., Hashem, Y.
Deposit date:2017-03-07
Release date:2017-06-28
Last modified:2019-02-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structures and dynamics of hibernating ribosomes from Staphylococcus aureus mediated by intermolecular interactions of HPF.
EMBO J., 36, 2017
5TGM
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CRYSTAL STRUCTURE OF THE S.CEREVISIAE 80S RIBOSOME IN COMPLEX WITH THE A-SITE BOUND AMINOACYL-TRNA ANALOG ACCA-PRO
Descriptor:18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Melnikov, S., Mailliot, J., Yusupov, M.
Deposit date:2016-09-28
Release date:2017-01-18
Last modified:2017-01-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Molecular insights into protein synthesis with proline residues.
EMBO Rep., 17, 2016
6GQ1
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CRYO-EM RECONSTRUCTION OF YEAST 80S RIBOSOME IN COMPLEX WITH MRNA, TRNA AND EEF2 (GMPPCP/SORDARIN)
Descriptor:Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S ribosomal RNA, ...
Authors:Pellegrino, S., Demeshkina, N., Mancera-Martinez, E., Melnikov, S., Simonetti, A., Myasnikov, A., Yusupov, M., Yusupova, G., Hashem, Y.
Deposit date:2018-06-07
Release date:2018-07-11
Last modified:2018-08-08
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance.
J. Mol. Biol., 430, 2018
6GQB
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CRYO-EM RECONSTRUCTION OF YEAST 80S RIBOSOME IN COMPLEX WITH MRNA, TRNA AND EEF2 (GDP+ALF4/SORDARIN)
Descriptor:Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5S ribosomal RNA, ...
Authors:Pellegrino, S., Yusupov, M., Yusupova, G., Hashem, Y.
Deposit date:2018-06-07
Release date:2018-07-11
Last modified:2018-11-28
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance.
J. Mol. Biol., 430, 2018
6GQV
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CRYO-EM RECOSNTRUCTION OF YEAST 80S RIBOSOME IN COMPLEX WITH MRNA, TRNA AND EEF2 (GMPPCP)
Descriptor:25S ribosomal RNA, 5S ribosomal RNA, 5.8S ribosomal RNA, ...
Authors:Pellegrino, S., Yusupov, M., Yusupova, G., Hashem, Y.
Deposit date:2018-06-08
Release date:2018-07-11
Last modified:2018-08-08
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance.
J. Mol. Biol., 430, 2018
6GSJ
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STRUCTURE OF T. THERMOPHILUS 70S RIBOSOME COMPLEX WITH MRNA, TRNAFMET AND COGNATE TRNATHR IN THE A-SITE
Descriptor:16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Rozov, A., Yusupov, M., Yusupova, G.
Deposit date:2018-06-14
Release date:2018-07-04
Last modified:2018-09-05
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria.
Nucleic Acids Res., 46, 2018
6GSK
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STRUCTURE OF T. THERMOPHILUS 70S RIBOSOME COMPLEX WITH MRNA, TRNAFMET AND NEAR-COGNATE TRNATHR IN THE A-SITE
Descriptor:16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Rozov, A., Yusupov, M., Yusupova, G.
Deposit date:2018-06-14
Release date:2018-07-04
Last modified:2018-09-05
Method:X-RAY DIFFRACTION (3.36 Å)
Cite:Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria.
Nucleic Acids Res., 46, 2018
6GSL
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STRUCTURE OF T. THERMOPHILUS 70S RIBOSOME COMPLEX WITH MRNA, TRNAFMET AND COGNATE TRNAARG IN THE A-SITE
Descriptor:16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Rozov, A., Yusupov, M., Yusupova, G.
Deposit date:2018-06-14
Release date:2018-07-04
Last modified:2018-09-05
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria.
Nucleic Acids Res., 46, 2018
5I4L
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CRYSTAL STRUCTURE OF AMICOUMACIN A BOUND TO THE YEAST 80S RIBOSOME
Descriptor:18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Prokhorova, I.V., Yusupova, G., Yusupov, M.
Deposit date:2016-02-12
Release date:2016-06-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Amicoumacin A induces cancer cell death by targeting the eukaryotic ribosome.
Sci Rep, 6, 2016
5NKO
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SOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF S. AUREUS HIBERNATING PROMOTING FACTOR (CTD-SAHPF)
Descriptor:Ribosome hibernation promotion factor
Authors:Usachev, K.S., Khusainov, I.S., Ayupov, R.K., Validov, S.Z., Kieffer, B., Yusupov, M.M.
Deposit date:2017-03-31
Release date:2017-07-05
Last modified:2017-07-26
Method:SOLUTION NMR
Cite:Structures and dynamics of hibernating ribosomes from Staphylococcus aureus mediated by intermolecular interactions of HPF.
EMBO J., 36, 2017
5LYB
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CRYSTAL STRUCTURE OF THE S.CEREVISIAE 80S RIBOSOME IN COMPLEX WITH THE A-SITE BOUND AMINOACYL-TRNA ANALOG ACCPMN
Descriptor:18S rRNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Melnikov, S., Mailliot, J.
Deposit date:2016-09-26
Release date:2016-11-23
Last modified:2016-12-14
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Molecular insights into protein synthesis with proline residues.
EMBO Rep., 17, 2016
5TGA
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CRYSTAL STRUCTURE OF THE S.CEREVISIAE 80S RIBOSOME IN COMPLEX WITH THE A-SITE BOUND AMINOACYL-TRNA ANALOG ACCA-PRO
Descriptor:18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Melnikov, S., Mailliot, J.
Deposit date:2016-09-27
Release date:2016-11-23
Last modified:2016-12-14
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Molecular insights into protein synthesis with proline residues.
EMBO Rep., 17, 2016
6GZQ
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T. THERMOPHILUS HIBERNATING 70S RIBOSOME
Descriptor:50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, ...
Authors:Flygaard, R.K., Jenner, L.B.
Deposit date:2018-07-04
Release date:2018-10-24
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism.
Nat Commun, 9, 2018
6GZX
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T. THERMOPHILUS HIBERNATING 100S RIBOSOME (ICE)
Descriptor:50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, ...
Authors:Flygaard, R.K., Jenner, L.B.
Deposit date:2018-07-05
Release date:2018-10-24
Method:ELECTRON MICROSCOPY (4.57 Å)
Cite:Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism.
Nat Commun, 9, 2018
6GZZ
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T. THERMOPHILUS HIBERNATING 100S RIBOSOME (AMC)
Descriptor:50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, ...
Authors:Flygaard, R.K., Jenner, L.B.
Deposit date:2018-07-05
Release date:2018-10-24
Method:ELECTRON MICROSCOPY (4.13 Å)
Cite:Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism.
Nat Commun, 9, 2018
1Y90
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HIV-1 DIS(MAL) DUPLEX MN-SOAKED
Descriptor:5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MANGANESE (II) ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2004-12-14
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003