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1PZW
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BU of 1pzw by Molmil
Crystal structure of the zinc finger associated domain of the Drosophila transcription factor Grauzone
Descriptor: Transcription factor grauzone, ZINC ION
Authors:Jauch, R, Bourenkov, G.P, Chung, H.-R, Urlaub, H, Reidt, U, Jaeckle, H, Wahl, M.C.
Deposit date:2003-07-14
Release date:2003-11-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:The zinc finger-associated domain of the Drosophila transcription factor grauzone is a novel zinc-coordinating protein-protein interaction module
STRUCTURE, 11, 2003
7ZX7
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BU of 7zx7 by Molmil
Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter (CC)
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Rengachari, S, Schilbach, S, Kaliyappan, T, Gouge, J, Zumer, K, Schwarz, J, Urlaub, H, Dienemann, C, Vannini, A, Cramer, P.
Deposit date:2022-05-20
Release date:2022-11-30
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of SNAPc-dependent snRNA transcription initiation by RNA polymerase II.
Nat.Struct.Mol.Biol., 29, 2022
7ZWD
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BU of 7zwd by Molmil
Structure of SNAPc containing Pol II pre-initiation complex bound to U5 snRNA promoter (CC)
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Rengachari, S, Schilbach, S, Kaliyappan, T, Gouge, J, Zumer, K, Schwarz, J, Urlaub, H, Dienemann, C, Vannini, A, Cramer, P.
Deposit date:2022-05-19
Release date:2022-11-30
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of SNAPc-dependent snRNA transcription initiation by RNA polymerase II.
Nat.Struct.Mol.Biol., 29, 2022
7ZXE
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BU of 7zxe by Molmil
Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter (OC)
Descriptor: Non-template strand, TATA-box-binding protein, Template strand, ...
Authors:Rengachari, S, Schilbach, S, Kaliyappan, T, Gouge, J, Zumer, K, Schwarz, J, Urlaub, H, Dienemann, C, Vannini, A, Cramer, P.
Deposit date:2022-05-20
Release date:2022-11-30
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis of SNAPc-dependent snRNA transcription initiation by RNA polymerase II.
Nat.Struct.Mol.Biol., 29, 2022
7ZX8
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BU of 7zx8 by Molmil
Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter (OC)
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Rengachari, S, Schilbach, S, Kaliyappan, T, Gouge, J, Zumer, K, Schwarz, J, Urlaub, H, Dienemann, C, Vannini, A, Cramer, P.
Deposit date:2022-05-20
Release date:2022-12-07
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of SNAPc-dependent snRNA transcription initiation by RNA polymerase II.
Nat.Struct.Mol.Biol., 29, 2022
7QP6
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BU of 7qp6 by Molmil
Structure of the human 48S initiation complex in open state (h48S AUG open)
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Yi, S.-H, Petrychenko, V, Schliep, J.E, Goyal, A, Linden, A, Chari, A, Urlaub, H, Stark, H, Rodnina, M.V, Adio, S, Fischer, N.
Deposit date:2022-01-03
Release date:2022-05-11
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Conformational rearrangements upon start codon recognition in human 48S translation initiation complex.
Nucleic Acids Res., 50, 2022
7QP7
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BU of 7qp7 by Molmil
Structure of the human 48S initiation complex in closed state (h48S AUG closed)
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Yi, S.-H, Petrychenko, V, Schliep, J.E, Goyal, A, Linden, A, Chari, A, Urlaub, H, Stark, H, Rodnina, M.V, Adio, S, Fischer, N.
Deposit date:2022-01-03
Release date:2022-05-11
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Conformational rearrangements upon start codon recognition in human 48S translation initiation complex.
Nucleic Acids Res., 50, 2022
4PJ3
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BU of 4pj3 by Molmil
Structural insight into the function and evolution of the spliceosomal helicase Aquarius, Structure of Aquarius in complex with AMPPNP
Descriptor: Intron-binding protein aquarius, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:De, I, Bessonov, S, Hofele, R, dos Santos, K.F, Will, C.L, Urlaub, H, Luhrmann, R, Pena, V.
Deposit date:2014-05-11
Release date:2015-01-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The RNA helicase Aquarius exhibits structural adaptations mediating its recruitment to spliceosomes.
Nat.Struct.Mol.Biol., 22, 2015
4BRU
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BU of 4bru by Molmil
Crystal structure of the yeast Dhh1-Edc3 complex
Descriptor: ATP-DEPENDENT RNA HELICASE DHH1, ENHANCER OF MRNA-DECAPPING PROTEIN 3
Authors:Sharif, H, Ozgur, S, Sharma, K, Basquin, C, Urlaub, H, Conti, E.
Deposit date:2013-06-05
Release date:2013-07-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.245 Å)
Cite:Structural Analysis of the Yeast Dhh1-Pat1 Complex Reveals How Dhh1 Engages Pat1, Edc3 and RNA in Mutually Exclusive Interactions
Nucleic Acids Res., 41, 2013
4BRW
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BU of 4brw by Molmil
Crystal structure of the yeast Dhh1-Pat1 complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ATP-DEPENDENT RNA HELICASE DHH1, DNA TOPOISOMERASE 2-ASSOCIATED PROTEIN PAT1, ...
Authors:Sharif, H, Ozgur, S, Sharma, K, Basquin, C, Urlaub, H, Conti, E.
Deposit date:2013-06-05
Release date:2013-07-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.795 Å)
Cite:Structural Analysis of the Yeast Dhh1-Pat1 Complex Reveals How Dhh1 Engages Pat1, Edc3 and RNA in Mutually Exclusive Interactions
Nucleic Acids Res., 41, 2013
7ZWC
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BU of 7zwc by Molmil
Structure of SNAPc:TBP-TFIIA-TFIIB sub-complex bound to U5 snRNA promoter
Descriptor: Non-template strand, TATA-box-binding protein, Template strand, ...
Authors:Rengachari, S, Schilbach, S, Kaliyappan, T, Gouge, J, Zumer, K, Schwarz, J, Urlaub, H, Dienemann, C, Vannini, A, Cramer, P.
Deposit date:2022-05-19
Release date:2022-11-30
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis of SNAPc-dependent snRNA transcription initiation by RNA polymerase II.
Nat.Struct.Mol.Biol., 29, 2022
6TDA
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BU of 6tda by Molmil
Structure of SWI/SNF chromatin remodeler RSC bound to a nucleosome
Descriptor: Actin-like protein ARP9, Actin-related protein 7, Chromatin structure-remodeling complex protein RSC58, ...
Authors:Wagner, F.R, Dienemann, C, Wang, H, Stuetzer, A, Tegunov, D, Urlaub, H, Cramer, P.
Deposit date:2019-11-08
Release date:2020-03-18
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (15 Å)
Cite:Structure of SWI/SNF chromatin remodeller RSC bound to a nucleosome.
Nature, 579, 2020
1TZW
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BU of 1tzw by Molmil
T. maritima NusB, P3121, Form 2
Descriptor: CALCIUM ION, N utilization substance protein B homolog
Authors:Bonin, I, Robelek, R, Benecke, H, Urlaub, H, Bacher, A, Richter, G, Wahl, M.C.
Deposit date:2004-07-12
Release date:2004-08-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of the antitermination factor NusB from Thermotoga maritima and implications for RNA binding
Biochem.J., 383, 2004
1TZU
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BU of 1tzu by Molmil
T. maritima NusB, P212121
Descriptor: N utilization substance protein B homolog, SULFATE ION
Authors:Bonin, I, Robelek, R, Benecke, H, Urlaub, H, Bacher, A, Richter, G, Wahl, M.C.
Deposit date:2004-07-12
Release date:2004-08-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of the antitermination factor NusB from Thermotoga maritima and implications for RNA binding
Biochem.J., 383, 2004
1TZT
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BU of 1tzt by Molmil
T. maritima NusB, P21
Descriptor: N utilization substance protein B homolog, SULFATE ION
Authors:Bonin, I, Robelek, R, Benecke, H, Urlaub, H, Bacher, A, Richter, G, Wahl, M.C.
Deposit date:2004-07-12
Release date:2004-08-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structures of the antitermination factor NusB from Thermotoga maritima and implications for RNA binding
Biochem.J., 383, 2004
1TZV
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BU of 1tzv by Molmil
T. maritima NusB, P3121, Form 1
Descriptor: N utilization substance protein B homolog
Authors:Bonin, I, Robelek, R, Benecke, H, Urlaub, H, Bacher, A, Richter, G, Wahl, M.C.
Deposit date:2004-07-12
Release date:2004-08-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structures of the antitermination factor NusB from Thermotoga maritima and implications for RNA binding
Biochem.J., 383, 2004
1TZX
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BU of 1tzx by Molmil
T. maritima NusB, P3221
Descriptor: CITRIC ACID, N utilization substance protein B homolog
Authors:Bonin, I, Robelek, R, Benecke, H, Urlaub, H, Bacher, A, Richter, G, Wahl, M.C.
Deposit date:2004-07-12
Release date:2004-08-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structures of the antitermination factor NusB from Thermotoga maritima and implications for RNA binding
Biochem.J., 383, 2004
5OL9
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BU of 5ol9 by Molmil
Structure of human mitochondrial transcription elongation factor (TEFM) N-terminal domain
Descriptor: ACETATE ION, Transcription elongation factor, mitochondrial
Authors:Hillen, H.S, Parshin, A.V, Agaronyan, K, Morozov, Y, Graber, J.J, Chernev, A, Schwinghammer, K, Urlaub, H, Anikin, M, Cramer, P, Temiakov, D.
Deposit date:2017-07-27
Release date:2017-10-18
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.302 Å)
Cite:Mechanism of Transcription Anti-termination in Human Mitochondria.
Cell, 171, 2017
5OLA
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BU of 5ola by Molmil
Structure of mitochondrial transcription elongation complex in complex with elongation factor TEFM
Descriptor: DNA (30-MER), DNA (5'-D(P*AP*TP*GP*GP*TP*GP*TP*AP*AP*CP*GP*CP*CP*AP*GP*AP*CP*GP*AP*AP*C)-3'), DNA-directed RNA polymerase, ...
Authors:Hillen, H.S, Parshin, A.V, Agaronyan, K, Morozov, Y, Graber, J.J, Chernev, A, Schwinghammer, K, Urlaub, H, Anikin, M, Cramer, P, Temiakov, D.
Deposit date:2017-07-27
Release date:2017-10-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.904 Å)
Cite:Mechanism of Transcription Anti-termination in Human Mitochondria.
Cell, 171, 2017
5OL8
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BU of 5ol8 by Molmil
Structure of human mitochondrial transcription elongation factor (TEFM) C-terminal domain
Descriptor: GLYCEROL, Transcription elongation factor, mitochondrial
Authors:Hillen, H.S, Parshin, A.V, Agaronyan, K, Morozov, Y, Graber, J.J, Chernev, A, Schwinghammer, K, Urlaub, H, Anikin, M, Cramer, P, Temiakov, D.
Deposit date:2017-07-27
Release date:2017-10-18
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism of Transcription Anti-termination in Human Mitochondria.
Cell, 171, 2017
5OQM
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BU of 5oqm by Molmil
STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH AND CORE MEDIATOR
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Schilbach, S, Hantsche, M, Tegunov, D, Dienemann, C, Wigge, C, Urlaub, H, Cramer, P.
Deposit date:2017-08-13
Release date:2018-05-09
Last modified:2018-11-21
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Structures of transcription pre-initiation complex with TFIIH and Mediator.
Nature, 551, 2017
6GMH
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BU of 6gmh by Molmil
Structure of activated transcription complex Pol II-DSIF-PAF-SPT6
Descriptor: CDC73, CTR9,RNA polymerase-associated protein CTR9 homolog,RNA polymerase-associated protein CTR9 homolog, DNA-directed RNA polymerase II subunit RPB9, ...
Authors:Vos, S.M, Farnung, L, Boehing, M, Linden, A, Wigge, C, Urlaub, H, Cramer, P.
Deposit date:2018-05-26
Release date:2018-08-22
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of activated transcription complex Pol II-DSIF-PAF-SPT6.
Nature, 560, 2018
6GML
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BU of 6gml by Molmil
Structure of paused transcription complex Pol II-DSIF-NELF
Descriptor: DNA-directed RNA polymerase II subunit RPB9, DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ...
Authors:Vos, S.M, Farnung, L, Urlaub, H, Cramer, P.
Deposit date:2018-05-27
Release date:2018-09-05
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of paused transcription complex Pol II-DSIF-NELF.
Nature, 560, 2018
7OF2
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BU of 7of2 by Molmil
Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.
Descriptor: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ...
Authors:Hillen, H.S, Lavdovskaia, E, Nadler, F, Hanitsch, E, Linden, A, Bohnsack, K.E, Urlaub, H, Richter-Dennerlein, R.
Deposit date:2021-05-04
Release date:2021-06-02
Last modified:2021-06-30
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling.
Nat Commun, 12, 2021
7OF4
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BU of 7of4 by Molmil
Structure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).
Descriptor: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ...
Authors:Hillen, H.S, Lavdovskaia, E, Nadler, F, Hanitsch, E, Linden, A, Bohnsack, K.E, Urlaub, H, Richter-Dennerlein, R.
Deposit date:2021-05-04
Release date:2021-06-09
Last modified:2021-06-30
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling.
Nat Commun, 12, 2021

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