Author results

2YVP
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CRYSTAL STRUCTURE OF NDX2 IN COMPLEX WITH MG2+ AND AMPCPR FROM THERMUS THERMOPHILUS HB8
Descriptor:MutT/nudix family protein, MAGNESIUM ION, METHYLENE ADP-BETA-XYLOSE
Authors:Wakamatsu, T., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-02-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
2YZJ
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CRYSTAL STRUCTURE OF DCTP DEAMINASE FROM SULFOLOBUS TOKODAII
Descriptor:167aa long hypothetical dUTPase, DEOXYURIDINE-5'-DIPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Kanagawa, M., Baba, S., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal structure of dCTP deaminase from Sulfolobus tokodaii
To be Published
2YVO
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CRYSTAL STRUCTURE OF NDX2 IN COMPLEX WITH MG2+ AND AMP FROM THERMUS THERMOPHILUS HB8
Descriptor:MutT/nudix family protein, MAGNESIUM ION, ADENOSINE MONOPHOSPHATE
Authors:Wakamatsu, T., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-02-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
1IUK
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THE STRUCTURE OF NATIVE ID.343 FROM THERMUS THERMOPHILUS
Descriptor:hypothetical protein TT1466
Authors:Wada, T., Shirouzu, M., Park, S.-Y., Tame, J.R., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-03-05
Release date:2003-07-15
Last modified:2014-04-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a conserved CoA-binding protein synthesized by a cell-free system.
Acta Crystallogr.,Sect.D, 59, 2003
1J1Y
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CRYSTAL STRUCTURE OF PAAI FROM THERMUS THERMOPHILUS HB8
Descriptor:PaaI protein, CHLORIDE ION, MAGNESIUM ION
Authors:Kunishima, N., Sugahara, M., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-24
Release date:2004-02-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
1J27
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CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN, TT1725, FROM THERMUS THERMOPHILUS HB8 AT 1.7A RESOLUTION
Descriptor:hypothetical protein TT1725
Authors:Seto, A., Shirouzu, M., Terada, T., Murayama, K., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-26
Release date:2003-12-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a hypothetical protein, TT1725, from Thermus thermophilus HB8 at 1.7 A resolution
Proteins, 53, 2003
1UEK
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CRYSTAL STRUCTURE OF 4-(CYTIDINE 5'-DIPHOSPHO)-2C-METHYL-D-ERYTHRITOL KINASE
Descriptor:4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase
Authors:Wada, T., Kuramitsu, S., Yokoyama, S., Tame, J.R.H., Park, S.Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-17
Release date:2003-06-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of 4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, an Enzyme in the Non-mevalonate Pathway of Isoprenoid Synthesis.
J.Biol.Chem., 278, 2003
1VCD
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CRYSTAL STRUCTURE OF A T.THERMOPHILUS HB8 AP6A HYDROLASE NDX1
Descriptor:Ndx1, SULFATE ION, GLYCEROL
Authors:Iwai, T., Nakagawa, N., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-05
Release date:2005-04-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Nudix Protein Ndx1 from Thermus thermophilus HB8 in binary complex with diadenosine hexaphosphate
To be Published
1VFJ
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CRYSTAL STRUCTURE OF TT1020 FROM THERMUS THERMOPHILUS HB8
Descriptor:nitrogen regulatory protein p-II
Authors:Wang, H., Sakai, H., Takemoto-Hori, C., Kaminishi, T., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-04-15
Release date:2005-01-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of the signal transducing protein GlnK from Thermus thermophilus HB8
J.STRUCT.BIOL., 149, 2005
1WJX
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CRYSTAL STURUCTURE OF TT0801 FROM THERMUS THERMOPHILUS
Descriptor:SsrA-binding protein, POTASSIUM ION
Authors:Bessho, Y., Shibata, R., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-29
Release date:2004-11-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for functional mimicry of long-variable-arm tRNA by transfer-messenger RNA.
Proc.Natl.Acad.Sci.Usa, 104, 2007
1WKC
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CRYSTAL STRUCTURE OF A 5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE-RELATED PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:HB8 TT1367 protein, SULFATE ION
Authors:Yanai, H., Tsuge, H., Utsunomiya, H., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-31
Release date:2004-12-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a 5-formyltetrahydrofolate cycloligase-related protein from Thermus thermophilus HB8
To be Published
2CU3
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CRYSTAL STRUCTURE OF TT1568 FROM THERMUS THERMOPHILUS HB8
Descriptor:unknown function protein, CADMIUM ION
Authors:Sugahara, M., Satoh, S., Ebihara, A., Kuramitsu, S., Yokoyama, S., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-25
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of TT1568 from Thermus thermophilus HB8
To be Published
2D4P
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CRYSTAL STRUCTURE OF TTHA1254 (WILD TYPE) FROM THERMUS THERMOPHILUS HB8
Descriptor:hypothetical protein TTHA1254
Authors:Mizohata, E., Uchikubo, T., Kinoshita, Y., Terada, T., Shirouzu, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-10-21
Release date:2006-04-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of TTHA1254 (wild type) from Thermus thermophilus HB8
To be Published
2D5A
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HYPOTHETICAL PROTEIN FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:hypothetical protein PH1109, COENZYME A
Authors:Hiyama, T.B., Sekine, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-10-31
Release date:2006-10-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of CoA recognition by the Pyrococcus single-domain CoA-binding proteins.
J.STRUCT.FUNCT.GENOM., 7, 2006
2DBQ
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CRYSTAL STRUCTURE OF GLYOXYLATE REDUCTASE (PH0597) FROM PYROCOCCUS HORIKOSHII OT3, COMPLEXED WITH NADP (I41)
Descriptor:Glyoxylate reductase, SULFATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Yoshikawa, S., Arai, R., Kinoshita, Y., Uchikubo-Kamo, T., Akasaka, R., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-16
Release date:2006-06-16
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of archaeal glyoxylate reductase from Pyrococcus horikoshii OT3 complexed with nicotinamide adenine dinucleotide phosphate.
Acta Crystallogr.,Sect.D, 63, 2007
2E8E
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CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (AQ_1549) FROM AQUIFEX AEOLICUS VF5 (REDUCED FORM)
Descriptor:Hypothetical protein Aq_1549, 2,3-DIHYDROXY-1,4-DITHIOBUTANE
Authors:Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-19
Release date:2008-01-22
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5
To be Published
2EG4
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CRYSTAL STRUCTURE OF PROBABLE THIOSULFATE SULFURTRANSFERASE
Descriptor:Probable thiosulfate sulfurtransferase, ZINC ION, SULFATE ION
Authors:Sakai, H., Ebihara, A., Kitamura, Y., Shinkai, A., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-27
Release date:2008-03-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Probable Thiosulfate Sulfurtransferase
To be Published
2GGS
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CRYSTAL STRUCTURE OF HYPOTHETICAL DTDP-4-DEHYDRORHAMNOSE REDUCTASE FROM SULFOLOBUS TOKODAII
Descriptor:273aa long hypothetical dTDP-4-dehydrorhamnose reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Rajakannan, V., Mizushima, T., Suzuki, A., Masui, R., Kuramitsu, S., Yamane, T.
Deposit date:2006-03-24
Release date:2007-03-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:crystal structure of hypothetical dTDP-4-dehydrorhamnose reductase from sulfolobus tokodaii
To be published
2PBQ
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CRYSTAL STRUCTURE OF MOLYBDENUM COFACTOR BIOSYNTHESIS (AQ_061) FROM AQUIFEX AEOLICUS VF5
Descriptor:Molybdenum cofactor biosynthesis MOG
Authors:Jeyakanthan, J., Mahesh, S., Kanaujia, S.P., Ramakumar, S., Sekar, K., Agari, Y., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-29
Release date:2007-10-02
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of molybdenum cofactor biosynthesis (aq_061) from aquifex aeolicus VF5
to be published
2PCJ
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CRYSTAL STRUCTURE OF ABC TRANSPORTER (AQ_297) FROM AQUIFEX AEOLICUS VF5
Descriptor:Lipoprotein-releasing system ATP-binding protein lolD, SULFITE ION
Authors:Jeyakanthan, J., Kanaujia, S.P., Vasuki Ranjani, C., Sekar, K., Nakagawa, N., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of ABC transporter (aq_297) From Aquifex Aeolicus VF5
To be Published
2PCL
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CRYSTAL STRUCTURE OF ABC TRANSPORTER WITH COMPLEX (AQ_297) FROM AQUIFEX AEOLICUS VF5
Descriptor:Lipoprotein-releasing system ATP-binding protein lolD, MAGNESIUM ION, SULFATE ION, ...
Authors:Jeyakanthan, J., Kanaujia, S.P., Rafi, Z.A., Sekar, K., Ebihara, A., Nakagawa, N., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of ABC transporter with complex (aq_297) from aquifex aeolicus VF5
To be Published
2YQU
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CRYSTAL STRUCTURES AND EVOLUTIONARY RELATIONSHIP OF TWO DIFFERENT LIPOAMIDE DEHYDROGENASE(E3S) FROM THERMUS THERMOPHILUS
Descriptor:2-oxoglutarate dehydrogenase E3 component, CARBONATE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Kondo, H., Hossain, M.T., Adachi, W., Nakai, T., Kamiya, N., Kuramitsu, K.
Deposit date:2007-03-31
Release date:2008-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures and evolutionary relationship of two different lipoamide dehydrogenase(E3s) from Thermus thermophilus
To be Published
2YV1
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CRYSTAL STRUCTURE OF SUCCINYL-COA SYNTHETASE ALPHA CHAIN FROM METHANOCALDOCOCCUS JANNASCHII DSM 2661
Descriptor:Succinyl-CoA ligase [ADP-forming] subunit alpha
Authors:Niwa, H., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2007-10-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Methanocaldococcus jannaschii DSM 2661
To be Published
2YVM
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CRYSTAL STRUCTURE OF NDX2 IN COMPLEX WITH MG2+ FROM THERMUS THERMOPHILUS HB8
Descriptor:MutT/nudix family protein, MAGNESIUM ION
Authors:Wakamatsu, T., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-02-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
2YZW
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ADP-RIBOSYLGLYCOHYDROLASE-RELATED PROTEIN COMPLEX
Descriptor:ADP-ribosylglycohydrolase, GADOLINIUM ION
Authors:Ebihara, A., Manzoku, M., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:ADP-ribosylglycohydrolase-related protein complex
To be Published