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1IVM
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BU of 1ivm by Molmil
Solution structure of mouse lysozyme M
Descriptor: lysozyme M
Authors:Ueda, T, Obita, T, Imoto, T.
Deposit date:2002-03-27
Release date:2002-05-08
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure and activity of mouse lysozyme M
CELL.MOL.LIFE SCI., 60, 2003
5WQV
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BU of 5wqv by Molmil
Crystal structure of PriB mutant - S55A
Descriptor: Primosomal replication protein N
Authors:Fujiyama, S, Shiroishi, M, Katayama, T, Abe, Y, Ueda, T.
Deposit date:2016-11-28
Release date:2017-11-29
Last modified:2019-06-12
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Insight into the interaction between PriB and DnaT on bacterial DNA replication restart: Significance of the residues on PriB dimer interface and highly acidic region on DnaT.
Biochim Biophys Acta Proteins Proteom, 1867, 2019
1RFP
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BU of 1rfp by Molmil
ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE AND CHARGED SIDE CHAINS
Descriptor: LYSOZYME
Authors:Motoshima, H, Ohmura, T, Ueda, T, Imoto, T.
Deposit date:1996-11-14
Release date:1997-05-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Analysis of the stabilization of hen lysozyme by helix macrodipole and charged side chain interaction.
J.Biochem.(Tokyo), 121, 1997
1FLQ
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BU of 1flq by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
Descriptor: LYSOZYME
Authors:Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
Deposit date:2000-08-15
Release date:2000-09-06
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
1FLU
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BU of 1flu by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
Descriptor: LYSOZYME
Authors:Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
Deposit date:2000-08-15
Release date:2000-09-06
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.785 Å)
Cite:Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
1FN5
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BU of 1fn5 by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
Descriptor: LYSOZYME
Authors:Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
Deposit date:2000-08-21
Release date:2000-09-06
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
1FLW
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BU of 1flw by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
Descriptor: LYSOZYME
Authors:Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
Deposit date:2000-08-15
Release date:2000-09-06
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.812 Å)
Cite:Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
1FLY
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BU of 1fly by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
Descriptor: LYSOZYME
Authors:Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
Deposit date:2000-08-15
Release date:2000-09-06
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.833 Å)
Cite:Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
2MLO
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BU of 2mlo by Molmil
Human CCR2 Membrane-Proximal C-Terminal Region (PRO-C) in a Membrane bound form
Descriptor: MCP-1 receptor
Authors:Esaki, K, Yoshinaga, S, Tsuji, T, Toda, E, Terashima, Y, Saitoh, T, Kohda, D, Kohno, T, Osawa, M, Ueda, T, Shimada, I, Matsushima, K, Terasawa, H.
Deposit date:2014-03-04
Release date:2014-10-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for the binding of the membrane-proximal C-terminal region of chemokine receptor CCR2 with the cytosolic regulator FROUNT.
Febs J., 281, 2014
2MLQ
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BU of 2mlq by Molmil
Human CCR2 Membrane-Proximal C-Terminal Region (PRO-C) in a frount bound form
Descriptor: MCP-1 receptor
Authors:Esaki, K, Yoshinaga, S, Tsuji, T, Toda, E, Terashima, Y, Saitoh, T, Kohda, D, Kohno, T, Osawa, M, Ueda, T, Shimada, I, Matsushima, K, Terasawa, H.
Deposit date:2014-03-04
Release date:2014-10-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for the binding of the membrane-proximal C-terminal region of chemokine receptor CCR2 with the cytosolic regulator FROUNT.
Febs J., 281, 2014
2RU8
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BU of 2ru8 by Molmil
DnaT C-terminal domain
Descriptor: Primosomal protein 1
Authors:Abe, Y, Tani, J, Fujiyama, S, Urabe, M, Sato, K, Aramaki, T, Katayama, T, Ueda, T.
Deposit date:2014-01-29
Release date:2014-10-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and mechanism of the primosome protein DnaT-functional structures for homotrimerization, dissociation of ssDNA from the PriB·ssDNA complex, and formation of the DnaT·ssDNA complex.
Febs J., 281, 2014
2RT6
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BU of 2rt6 by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for PriC N-terminal domain
Descriptor: Primosomal replication protein N''
Authors:Aramaki, T, Abe, Y, Katayama, T, Ueda, T.
Deposit date:2013-04-24
Release date:2013-08-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal domain of a replication restart primosome factor, PriC, in Escherichia coli.
Protein Sci., 22, 2013
8J3S
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BU of 8j3s by Molmil
Complex structure of human cytomegalovirus protease and a macrocyclic peptide ligand
Descriptor: Assemblin, PHE-ILE-THR-GLY-HIS-TYR-TRP-VAL-ARG-PHE-LEU-PRO-CYS-GLY
Authors:Yoshida, S, Sako, Y, Nikaido, E, Ueda, T, Kozono, I, Ichihashi, Y, Nakahashi, A, Onishi, M, Yamatsu, Y, Kato, T, Nishikawa, J, Tachibana, Y.
Deposit date:2023-04-18
Release date:2023-11-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Peptide-to-Small Molecule: Discovery of Non-Covalent, Active-Site Inhibitors of beta-Herpesvirus Proteases.
Acs Med.Chem.Lett., 14, 2023
8J3T
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BU of 8j3t by Molmil
Complex structure of human cytomegalovirus protease and a non-covalent small-molecule ligand
Descriptor: (4R)-1-[1-[(S)-[1-cyclopentyl-3-(2-methylphenyl)pyrazol-4-yl]-(4-methylphenyl)methyl]-2-oxidanylidene-pyridin-3-yl]-3-methyl-2-oxidanylidene-N-(3-oxidanylidene-2-azabicyclo[2.2.2]octan-4-yl)imidazolidine-4-carboxamide, Assemblin
Authors:Yoshida, S, Sako, Y, Nikaido, E, Ueda, T, Kozono, I, Ichihashi, Y, Nakahashi, A, Onishi, M, Yamatsu, Y, Kato, T, Nishikawa, J, Tachibana, Y.
Deposit date:2023-04-18
Release date:2023-11-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Peptide-to-Small Molecule: Discovery of Non-Covalent, Active-Site Inhibitors of beta-Herpesvirus Proteases.
Acs Med.Chem.Lett., 14, 2023
2RUP
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BU of 2rup by Molmil
Solution structure of rat P2X4 receptor head domain
Descriptor: P2X purinoceptor 4
Authors:Abe, Y, Igawa, T, Tsuda, M, Inoue, K, Ueda, T.
Deposit date:2014-11-12
Release date:2015-02-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of the rat P2X4 receptor head domain involved in inhibitory metal binding
FEBS Lett., 589, 2015
7XAR
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BU of 7xar by Molmil
Crystal structure of 3C-like protease from SARS-CoV-2 in complex with covalent inhibitor
Descriptor: 3C-like proteinase, 4-fluoranyl-~{N}-[(2~{S})-1-[2-(2-fluoranylethanoyl)-2-[[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]methyl]hydrazinyl]-4-methyl-1-oxidanylidene-pentan-2-yl]-1~{H}-indole-2-carboxamide, CHLORIDE ION, ...
Authors:Caaveiro, J.M.M, Ochi, J, Takahashi, D, Ueda, T, Ojida, A.
Deposit date:2022-03-18
Release date:2022-11-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery of Chlorofluoroacetamide-Based Covalent Inhibitors for Severe Acute Respiratory Syndrome Coronavirus 2 3CL Protease.
J.Med.Chem., 65, 2022
1J1G
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BU of 1j1g by Molmil
Crystal structure of the RNase MC1 mutant N71S in complex with 5'-GMP
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, Ribonuclease MC1
Authors:Numata, T, Suzuki, A, Kakuta, Y, Kimura, K, Yao, M, Tanaka, I, Yoshida, Y, Ueda, T, Kimura, M.
Deposit date:2002-12-04
Release date:2003-05-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structures of the Ribonuclease MC1 Mutants N71T and N71S in Complex with 5'-GMP: Structural Basis for Alterations in Substrate Specificity
Biochemistry, 42, 2003
1J1F
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BU of 1j1f by Molmil
Crystal structure of the RNase MC1 mutant N71T in complex with 5'-GMP
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, RIBONUCLEASE MC1
Authors:Numata, T, Suzuki, A, Kakuta, Y, Kimura, K, Yao, M, Tanaka, I, Yoshida, Y, Ueda, T, Kimura, M.
Deposit date:2002-12-03
Release date:2003-05-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structures of the Ribonuclease MC1 Mutants N71T and N71S in Complex with 5'-GMP: Structural Basis for Alterations in Substrate Specificity
Biochemistry, 42, 2003
1IOT
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BU of 1iot by Molmil
STABILIZATION OF HEN EGG WHITE LYSOZYME BY A CAVITY-FILLING MUTATION
Descriptor: LYSOZYME C
Authors:Ohmura, T, Ueda, T, Ootsuka, K, Saito, M, Imoto, T.
Deposit date:2001-03-28
Release date:2001-04-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Stabilization of hen egg white lysozyme by a cavity-filling mutation.
Protein Sci., 10, 2001
1IR8
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BU of 1ir8 by Molmil
IM mutant of lysozyme
Descriptor: lysozyme
Authors:Ohmura, T, Ueda, T, Hashimoto, Y, Imoto, T.
Deposit date:2001-09-19
Release date:2001-10-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Tolerance of point substitution of methionine for isoleucine in hen egg white lysozyme.
Protein Eng., 14, 2001
1IR7
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BU of 1ir7 by Molmil
IM mutant of lysozyme
Descriptor: lysozyme
Authors:Ohmura, T, Ueda, T, Hashimoto, Y, Imoto, T.
Deposit date:2001-09-19
Release date:2001-10-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tolerance of point substitution of methionine for isoleucine in hen egg white lysozyme.
Protein Eng., 14, 2001
1IR9
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BU of 1ir9 by Molmil
IM mutant of lysozyme
Descriptor: lysozyme
Authors:Ohmura, T, Ueda, T, Hashimoto, Y, Imoto, T.
Deposit date:2001-09-19
Release date:2001-10-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tolerance of point substitution of methionine for isoleucine in hen egg white lysozyme.
Protein Eng., 14, 2001
1IOQ
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BU of 1ioq by Molmil
STABILIZATION OF HEN EGG WHITE LYSOZYME BY A CAVITY-FILLING MUTATION
Descriptor: LYSOZYME C
Authors:Ohmura, T, Ueda, T, Ootsuka, K, Saito, M, Imoto, T.
Deposit date:2001-03-28
Release date:2001-04-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Stabilization of hen egg white lysozyme by a cavity-filling mutation.
Protein Sci., 10, 2001
1IOS
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BU of 1ios by Molmil
STABILIZATION OF HEN EGG WHITE LYSOZYME BY A CAVITY-FILLING MUTATION
Descriptor: LYSOZYME C
Authors:Ohmura, T, Ueda, T, Ootsuka, K, Saito, M, Imoto, T.
Deposit date:2001-03-28
Release date:2001-04-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Stabilization of hen egg white lysozyme by a cavity-filling mutation.
Protein Sci., 10, 2001
1IOR
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BU of 1ior by Molmil
STABILIZATION OF HEN EGG WHITE LYSOZYME BY A CAVITY-FILLING MUTATION
Descriptor: LYSOZYME C
Authors:Ohmura, T, Ueda, T, Ootsuka, K, Saito, M, Imoto, T.
Deposit date:2001-03-28
Release date:2001-04-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Stabilization of hen egg white lysozyme by a cavity-filling mutation.
Protein Sci., 10, 2001

 

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